RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 JAK2O60674 1132 aa23.81■■□□□ 1.4
SSH3-202ENST00000308298 KCNQ4P56696 695 aa23.81■■□□□ 1.4
SSH3-202ENST00000308298 UBE2HP62256 183 aa23.81■■□□□ 1.4
SSH3-202ENST00000308298 SPATA5Q8NB90 893 aa23.81■■□□□ 1.4
SSH3-202ENST00000308298 LLPHQ9BRT6 129 aaKnown RBP23.81■■□□□ 1.4
SSH3-202ENST00000308298 SYCE3A1L190 88 aa23.8■■□□□ 1.4
SSH3-202ENST00000308298 NASPP49321 788 aaPredicted RBP23.8■■□□□ 1.4
SSH3-202ENST00000308298 APOBRQ0VD83 1088 aa23.8■■□□□ 1.4
SSH3-202ENST00000308298 PTF1AQ7RTS3 328 aa23.8■■□□□ 1.4
SSH3-202ENST00000308298 CDC5LQ99459 802 aaKnown RBP23.8■■□□□ 1.4
SSH3-202ENST00000308298 COL4A1P02462 1669 aa23.8■■□□□ 1.4
SSH3-202ENST00000308298 PDE6AP16499 860 aa23.79■■□□□ 1.4
SSH3-202ENST00000308298 HAND2P61296 217 aa23.79■■□□□ 1.4
SSH3-202ENST00000308298 FBXL16Q8N461 479 aa23.79■■□□□ 1.4
SSH3-202ENST00000308298 ZNF532Q9HCE3 1301 aa23.79■■□□□ 1.4
SSH3-202ENST00000308298 SNAP23O00161 211 aa23.79■■□□□ 1.4
SSH3-202ENST00000308298 RASGRF1Q13972 1273 aa23.79■■□□□ 1.4
SSH3-202ENST00000308298 ERFEQ4G0M1 354 aa23.79■■□□□ 1.4
SSH3-202ENST00000308298 RC3H1Q5TC82 1133 aaKnown RBP23.79■■□□□ 1.4
SSH3-202ENST00000308298 SMARCC2Q8TAQ2 1214 aa23.79■■□□□ 1.4
SSH3-202ENST00000308298 WWC3Q9ULE0 1092 aa23.78■■□□□ 1.4
SSH3-202ENST00000308298 COL24A1Q17RW2 1714 aa23.78■■□□□ 1.4
SSH3-202ENST00000308298 TCRBV5S4A2TA0A5A2 114 aa23.77■■□□□ 1.4
SSH3-202ENST00000308298 ZNF213O14771 459 aa23.77■■□□□ 1.4
SSH3-202ENST00000308298 CHRNDQ07001 517 aa23.77■■□□□ 1.4
SSH3-202ENST00000308298 PHF14O94880 888 aa23.77■■□□□ 1.4
SSH3-202ENST00000308298 CHST3Q7LGC8 479 aa23.77■■□□□ 1.4
SSH3-202ENST00000308298 FERMT3Q86UX7 667 aa23.77■■□□□ 1.4
SSH3-202ENST00000308298 ZNF274Q96GC6 653 aaPredicted RBP23.77■■□□□ 1.4
SSH3-202ENST00000308298 TAF1LQ8IZX4 1826 aa23.77■■□□□ 1.4
SSH3-202ENST00000308298 TAF1P21675 1872 aa23.77■■□□□ 1.4
SSH3-202ENST00000308298 LY75O60449 1722 aa23.76■■□□□ 1.39
SSH3-202ENST00000308298 KRT85P78386 507 aa23.76■■□□□ 1.39
SSH3-202ENST00000308298 SF3B3Q15393 1217 aaKnown RBP23.76■■□□□ 1.39
SSH3-202ENST00000308298 NSUN7Q8NE18 718 aaKnown RBP23.76■■□□□ 1.39
SSH3-202ENST00000308298 RPS6KA4O75676 772 aa23.76■■□□□ 1.39
SSH3-202ENST00000308298 MB21D2Q8IYB1 491 aaPredicted RBP23.76■■□□□ 1.39
SSH3-202ENST00000308298 NCOA7Q8NI08 942 aa23.76■■□□□ 1.39
SSH3-202ENST00000308298 RBSNQ9H1K0 784 aa23.76■■□□□ 1.39
SSH3-202ENST00000308298 BCL2L12Q9HB09 334 aa23.76■■□□□ 1.39
SSH3-202ENST00000308298 SBF2Q86WG5 1849 aa23.75■■□□□ 1.39
SSH3-202ENST00000308298 MCM5P33992 734 aa23.75■■□□□ 1.39
SSH3-202ENST00000308298 MAP3K12Q12852 859 aa23.75■■□□□ 1.39
SSH3-202ENST00000308298 ANKRD18AQ8IVF6 992 aa23.75■■□□□ 1.39
SSH3-202ENST00000308298 FAM184AQ8NB25 1140 aa23.75■■□□□ 1.39
SSH3-202ENST00000308298 CHMP4CQ96CF2 233 aa23.75■■□□□ 1.39
SSH3-202ENST00000308298 NARFQ9UHQ1 456 aa23.75■■□□□ 1.39
SSH3-202ENST00000308298 PDIA3P30101 505 aaKnown RBP23.74■■□□□ 1.39
SSH3-202ENST00000308298 EVCP57679 992 aa23.74■■□□□ 1.39
SSH3-202ENST00000308298 HMGN5P82970 282 aaKnown RBP23.74■■□□□ 1.39
SSH3-202ENST00000308298 TBC1D9BQ66K14 1250 aa23.74■■□□□ 1.39
SSH3-202ENST00000308298 RALYLQ86SE5 291 aaKnown RBP23.74■■□□□ 1.39
SSH3-202ENST00000308298 DDX11Q96FC9 970 aa23.74■■□□□ 1.39
SSH3-202ENST00000308298 BCAMP50895 628 aa23.74■■□□□ 1.39
SSH3-202ENST00000308298 BICDL1Q6ZP65 573 aa23.74■■□□□ 1.39
SSH3-202ENST00000308298 C3orf67Q6ZVT6 689 aa23.74■■□□□ 1.39
SSH3-202ENST00000308298 MYH15Q9Y2K3 1946 aa23.73■■□□□ 1.39
SSH3-202ENST00000308298 WDR19Q8NEZ3 1342 aa23.73■■□□□ 1.39
SSH3-202ENST00000308298 PRC1O43663 620 aa23.73■■□□□ 1.39
SSH3-202ENST00000308298 CTDNEP1O95476 244 aa23.73■■□□□ 1.39
SSH3-202ENST00000308298 CCT2P78371 535 aaKnown RBP23.73■■□□□ 1.39
SSH3-202ENST00000308298 CCDC183Q5T5S1 534 aa23.73■■□□□ 1.39
SSH3-202ENST00000308298 AIDAQ96BJ3 306 aa23.73■■□□□ 1.39
SSH3-202ENST00000308298 RTN4Q9NQC3 1192 aaKnown RBP23.73■■□□□ 1.39
SSH3-202ENST00000308298 CHD4Q14839 1912 aa23.72■■□□□ 1.39
SSH3-202ENST00000308298 PTPDC1A2A3K4 754 aa23.72■■□□□ 1.39
SSH3-202ENST00000308298 SLC10A5Q5PT55 438 aa23.72■■□□□ 1.39
SSH3-202ENST00000308298 SMIM5Q71RC9 77 aa23.72■■□□□ 1.39
SSH3-202ENST00000308298 FAM43AQ8N2R8 423 aa23.72■■□□□ 1.39
SSH3-202ENST00000308298 MAGEB6Q8N7X4 407 aa23.72■■□□□ 1.39
SSH3-202ENST00000308298 ANP32BQ92688 251 aaKnown RBP23.72■■□□□ 1.39
SSH3-202ENST00000308298 STRBPQ96SI9 672 aaKnown RBP23.72■■□□□ 1.39
SSH3-202ENST00000308298 CCNL1Q9UK58 526 aaPredicted RBP23.72■■□□□ 1.39
SSH3-202ENST00000308298 NAP1L2Q9ULW6 460 aaPredicted RBP23.72■■□□□ 1.39
SSH3-202ENST00000308298 KIF3AQ9Y496 699 aa23.72■■□□□ 1.39
SSH3-202ENST00000308298 ELP1O95163 1332 aa23.72■■□□□ 1.39
SSH3-202ENST00000308298 H3BQV1 296 aa23.72■■□□□ 1.39
SSH3-202ENST00000308298 GTF2E1P29083 439 aaPredicted RBP23.72■■□□□ 1.39
SSH3-202ENST00000308298 IFFO2Q5TF58 517 aa23.72■■□□□ 1.39
SSH3-202ENST00000308298 NYXQ9GZU5 481 aa23.72■■□□□ 1.39
SSH3-202ENST00000308298 GNPATO15228 680 aa23.71■■□□□ 1.39
SSH3-202ENST00000308298 APPP05067 770 aa23.71■■□□□ 1.39
SSH3-202ENST00000308298 CCDC173Q0VFZ6 552 aa23.71■■□□□ 1.39
SSH3-202ENST00000308298 FAM173BQ6P4H8 233 aa23.71■■□□□ 1.39
SSH3-202ENST00000308298 NBPF3Q9H094 633 aa23.71■■□□□ 1.39
SSH3-202ENST00000308298 BSDC1Q9NW68 430 aaPredicted RBP23.71■■□□□ 1.39
SSH3-202ENST00000308298 ZMYM6O95789 1325 aa23.71■■□□□ 1.39
SSH3-202ENST00000308298 SALL1Q9NSC2 1324 aa23.71■■□□□ 1.39
SSH3-202ENST00000308298 ANTXR2P58335 489 aa23.71■■□□□ 1.39
SSH3-202ENST00000308298 FAM182BQ5T319 152 aa23.71■■□□□ 1.39
SSH3-202ENST00000308298 NCOA5Q9HCD5 579 aaKnown RBP23.71■■□□□ 1.39
SSH3-202ENST00000308298 SRP68Q9UHB9 627 aaKnown RBP23.71■■□□□ 1.39
SSH3-202ENST00000308298 TRDNQ13061 729 aa23.7■■□□□ 1.38
SSH3-202ENST00000308298 RESTQ13127 1097 aa23.7■■□□□ 1.38
SSH3-202ENST00000308298 ALX1Q15699 326 aa23.7■■□□□ 1.38
SSH3-202ENST00000308298 TTC6Q86TZ1 520 aa23.7■■□□□ 1.38
SSH3-202ENST00000308298 TSPY26PQ9H489 355 aa23.7■■□□□ 1.38
SSH3-202ENST00000308298 GPHNQ9NQX3 736 aaPredicted RBP23.7■■□□□ 1.38
SSH3-202ENST00000308298 ZPR1O75312 459 aa23.69■■□□□ 1.38
SSH3-202ENST00000308298 GJD4Q96KN9 370 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms