RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 IBTKQ9P2D0 1353 aaPredicted RBP9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 CYP7A1P22680 504 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 GNA11P29992 359 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 SMC1AQ14683 1233 aaKnown RBP9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 OTUD7BQ6GQQ9 843 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 LARGE2Q8N3Y3 721 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 TMOD4Q9NZQ9 345 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 ZRANB1Q9UGI0 708 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 PCP11498 1178 aaKnown RBP9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 MAP9Q49MG5 647 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 IFIT1BQ5T764 474 aaKnown RBP9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 RHPN1Q8TCX5 695 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 KIF13AQ9H1H9 1805 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 DKC1O60832 514 aaKnown RBP eCLIP9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 WTAPQ15007 396 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 RAB3IL1Q8TBN0 382 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 ZSCAN16Q9H4T2 348 aaPredicted RBP9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 RBM28Q9NW13 759 aaKnown RBP9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 CHL1O00533 1208 aa9.52□□□□□ -0.88
PCDHB1-201ENST00000306549 UBA5Q9GZZ9 404 aa9.52□□□□□ -0.88
PCDHB1-201ENST00000306549 SPATA31D1Q6ZQQ2 1576 aa9.52□□□□□ -0.88
PCDHB1-201ENST00000306549 PHKG2P15735 406 aa9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 CFAP57Q96MR6 1250 aa9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 LIMCH1Q9UPQ0 1083 aa9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 F6X3S4 739 aa9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 SLC39A6Q13433 755 aa9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 CTNNBL1Q8WYA6 563 aaPredicted RBP9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 IGSF3O75054 1194 aa9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 STK3Q13188 491 aa9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 CLEC4GQ6UXB4 293 aa9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 PAG1Q9NWQ8 432 aa9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 ROBO2Q9HCK4 1378 aa9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 RFX1P22670 979 aa9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 ERVV-1B6SEH8 477 aa9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 CCDC117Q8IWD4 279 aaPredicted RBP9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 CERKQ8TCT0 537 aa9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 PSMD1Q99460 953 aa9.52□□□□□ -0.89
PCDHB1-201ENST00000306549 LOC102724428A0A0B4J2F2 783 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 BBOX1O75936 387 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 SIK1P57059 783 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 LPIN2Q92539 896 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 CHD4Q14839 1912 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 ATP2B4P23634 1241 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 RNF214Q8ND24 703 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 STX8Q9UNK0 236 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 SPDYE3A6NKU9 549 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 GPR162Q16538 588 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 SEMA3EO15041 775 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 SPATA32Q96LK8 384 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 CRACR2AQ9BSW2 395 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 CARD14Q9BXL6 1004 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 MPNDQ8N594 471 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 UPF3BQ9BZI7 483 aaKnown RBP9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 ERBB3P21860 1342 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 FAM83GA6ND36 823 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 GOLGA8BA8MQT2 603 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 HIBADHP31937 336 aaKnown RBP9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 MRPL50Q8N5N7 158 aaKnown RBP9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 PLCD3Q8N3E9 789 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 CCDC82Q8N4S0 544 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 BCORL1Q5H9F3 1711 aa9.51□□□□□ -0.89
PCDHB1-201ENST00000306549 FSD2A1L4K1 749 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 IARSP41252 1262 aaKnown RBP9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 LMAN1P49257 510 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 RBM26Q5T8P6 1007 aaKnown RBP9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 LUZP1Q86V48 1076 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 AS3MTQ9HBK9 375 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 MACROD2A1Z1Q3 448 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 NLRP5P59047 1200 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 IFFO1Q0D2I5 559 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 C6orf50Q9HD87 102 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 C3P01024 1663 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 CCDC172P0C7W6 258 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 CCDC174Q6PII3 467 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 CCDC113Q9H0I3 377 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 USO1O60763 962 aaKnown RBP9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 FAM193AP78312 1265 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 TAF3Q5VWG9 929 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 CRB1P82279 1406 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 UFL1O94874 794 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 NUTM1Q86Y26 1132 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 GOPCQ9HD26 462 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 HELLSQ9NRZ9 838 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 METAP2P50579 478 aaKnown RBP eCLIP9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 ZBTB38Q8NAP3 1195 aaPredicted RBP9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 PLVAPQ9BX97 442 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 CCDC8Q9H0W5 538 aaPredicted RBP9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 LEMD3Q9Y2U8 911 aa9.5□□□□□ -0.89
PCDHB1-201ENST00000306549 EYA2O00167 538 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 VAMP4O75379 141 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 ZWINTO95229 277 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 IKBKGQ9Y6K9 419 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 FAM114A1Q8IWE2 563 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 NEXMIFQ5QGS0 1516 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 GOLGA8AA7E2F4 631 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 NEK1Q96PY6 1258 aa9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 SPINK5Q9NQ38 1064 aaPredicted RBP9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 KIF2AO00139 706 aaPredicted RBP9.49□□□□□ -0.89
PCDHB1-201ENST00000306549 PER1O15534 1290 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms