RNA–Protein interactions for RNA: ENST00000306049.9

TEFM-201, Transcript of transcription elongation factor, mitochondrial, humanhuman

TSL 2

Gene TEFM, Length 1,262 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEFM-201ENST00000306049 BSDC1Q9NW68 430 aaPredicted RBP12.21□□□□□ -0.45
TEFM-201ENST00000306049 ANGEL1Q9UNK9 670 aaKnown RBP12.21□□□□□ -0.45
TEFM-201ENST00000306049 MYBBP1AQ9BQG0 1328 aaKnown RBP12.2□□□□□ -0.46
TEFM-201ENST00000306049 OTOFQ9HC10 1997 aa12.2□□□□□ -0.46
TEFM-201ENST00000306049 ELL2O00472 640 aaPredicted RBP12.2□□□□□ -0.46
TEFM-201ENST00000306049 ZNF853P0CG23 659 aa12.2□□□□□ -0.46
TEFM-201ENST00000306049 SP3Q02447 781 aa12.2□□□□□ -0.46
TEFM-201ENST00000306049 LDLRAD1Q5T700 205 aa12.2□□□□□ -0.46
TEFM-201ENST00000306049 COA1Q9GZY4 146 aa12.2□□□□□ -0.46
TEFM-201ENST00000306049 GREM2Q9H772 168 aa12.2□□□□□ -0.46
TEFM-201ENST00000306049 RANBP2P49792 3224 aaKnown RBP12.19□□□□□ -0.46
TEFM-201ENST00000306049 IGF2BP3O00425 579 aaKnown RBP eCLIP12.19□□□□□ -0.46
TEFM-201ENST00000306049 DDX58O95786 925 aaKnown RBP12.19□□□□□ -0.46
TEFM-201ENST00000306049 MYCP01106 439 aaPredicted RBP12.19□□□□□ -0.46
TEFM-201ENST00000306049 ZBTB48P10074 688 aaPredicted RBP12.19□□□□□ -0.46
TEFM-201ENST00000306049 MMP14P50281 582 aa12.19□□□□□ -0.46
TEFM-201ENST00000306049 ARHGEF6Q15052 776 aa12.19□□□□□ -0.46
TEFM-201ENST00000306049 TXNRD3Q86VQ6 643 aa12.19□□□□□ -0.46
TEFM-201ENST00000306049 TTLL11Q8NHH1 800 aa12.19□□□□□ -0.46
TEFM-201ENST00000306049 ADAMTS8Q9UP79 889 aa12.19□□□□□ -0.46
TEFM-201ENST00000306049 COL1A1P02452 1464 aaPredicted RBP12.19□□□□□ -0.46
TEFM-201ENST00000306049 IGKV5-2P06315 115 aa12.18□□□□□ -0.46
TEFM-201ENST00000306049 CRHR2Q13324 411 aa12.18□□□□□ -0.46
TEFM-201ENST00000306049 TTLL5Q6EMB2 1281 aa12.18□□□□□ -0.46
TEFM-201ENST00000306049 KIAA0825Q8IV33 1275 aa12.18□□□□□ -0.46
TEFM-201ENST00000306049 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
TEFM-201ENST00000306049 SPDYE1Q8NFV5 336 aaPredicted RBP12.18□□□□□ -0.46
TEFM-201ENST00000306049 ZBED3Q96IU2 234 aaPredicted RBP12.18□□□□□ -0.46
TEFM-201ENST00000306049 IFT57Q9NWB7 429 aa12.18□□□□□ -0.46
TEFM-201ENST00000306049 FZD1Q9UP38 647 aa12.18□□□□□ -0.46
TEFM-201ENST00000306049 MAP3K2Q9Y2U5 619 aa12.18□□□□□ -0.46
TEFM-201ENST00000306049 LEMD3Q9Y2U8 911 aa12.18□□□□□ -0.46
TEFM-201ENST00000306049 KLRK1P26718 216 aa12.17□□□□□ -0.46
TEFM-201ENST00000306049 GNAI1P63096 354 aa12.17□□□□□ -0.46
TEFM-201ENST00000306049 CCDC30Q5VVM6 783 aa12.17□□□□□ -0.46
TEFM-201ENST00000306049 C8orf58Q8NAV2 365 aa12.17□□□□□ -0.46
TEFM-201ENST00000306049 PTCH2Q9Y6C5 1203 aa12.17□□□□□ -0.46
TEFM-201ENST00000306049 SSC5DA1L4H1 1573 aa12.17□□□□□ -0.46
TEFM-201ENST00000306049 ZNF804BA4D1E1 1349 aa12.16□□□□□ -0.46
TEFM-201ENST00000306049 PI4KAP2A4QPH2 592 aa12.16□□□□□ -0.46
TEFM-201ENST00000306049 IGHMBP2P38935 993 aaKnown RBP12.16□□□□□ -0.46
TEFM-201ENST00000306049 GTF2IP78347 998 aa12.16□□□□□ -0.46
TEFM-201ENST00000306049 KSR2Q6VAB6 950 aa12.16□□□□□ -0.46
TEFM-201ENST00000306049 PI4KAP1Q8N8J0 262 aa12.16□□□□□ -0.46
TEFM-201ENST00000306049 WNK4Q96J92 1243 aa12.16□□□□□ -0.46
TEFM-201ENST00000306049 DEFB129Q9H1M3 183 aa12.16□□□□□ -0.46
TEFM-201ENST00000306049 CUL9Q8IWT3 2517 aa12.15□□□□□ -0.46
TEFM-201ENST00000306049 CAP1Q01518 475 aa12.15□□□□□ -0.46
TEFM-201ENST00000306049 CALD1Q05682 793 aaKnown RBP12.15□□□□□ -0.46
TEFM-201ENST00000306049 MAP3K11Q16584 847 aa12.15□□□□□ -0.46
TEFM-201ENST00000306049 CLMNQ96JQ2 1002 aa12.15□□□□□ -0.46
TEFM-201ENST00000306049 ANKRD2Q9GZV1 360 aa12.15□□□□□ -0.46
TEFM-201ENST00000306049 SSUH2Q9Y2M2 353 aa12.15□□□□□ -0.46
TEFM-201ENST00000306049 NEURL1BA8MQ27 555 aa12.14□□□□□ -0.47
TEFM-201ENST00000306049 APAF1O14727 1248 aa12.14□□□□□ -0.47
TEFM-201ENST00000306049 PPP1R12BO60237 982 aaPredicted RBP12.14□□□□□ -0.47
TEFM-201ENST00000306049 NEXNQ0ZGT2 675 aa12.14□□□□□ -0.47
TEFM-201ENST00000306049 DLGAP5Q15398 846 aa12.14□□□□□ -0.47
TEFM-201ENST00000306049 CWF19L2Q2TBE0 894 aaKnown RBP12.14□□□□□ -0.47
TEFM-201ENST00000306049 UBE3BQ7Z3V4 1068 aa12.14□□□□□ -0.47
TEFM-201ENST00000306049 HTATIP2Q9BUP3 242 aa12.14□□□□□ -0.47
TEFM-201ENST00000306049 CHMP4AQ9BY43 222 aa12.14□□□□□ -0.47
TEFM-201ENST00000306049 PPP2R3BQ9Y5P8 575 aa12.14□□□□□ -0.47
TEFM-201ENST00000306049 H7C1W4 665 aa12.13□□□□□ -0.47
TEFM-201ENST00000306049 ITGA6P23229 1130 aa12.13□□□□□ -0.47
TEFM-201ENST00000306049 KCNJ4P48050 445 aa12.13□□□□□ -0.47
TEFM-201ENST00000306049 CERS5Q8N5B7 392 aa12.13□□□□□ -0.47
TEFM-201ENST00000306049 TSPYL6Q8N831 410 aa12.13□□□□□ -0.47
TEFM-201ENST00000306049 MTMR14Q8NCE2 650 aa12.13□□□□□ -0.47
TEFM-201ENST00000306049 SH3TC2Q8TF17 1288 aa12.13□□□□□ -0.47
TEFM-201ENST00000306049 MPHOSPH8Q99549 860 aa12.13□□□□□ -0.47
TEFM-201ENST00000306049 PRO3102Q9H379 93 aa12.13□□□□□ -0.47
TEFM-201ENST00000306049 CD209Q9NNX6 404 aa12.13□□□□□ -0.47
TEFM-201ENST00000306049 PCDHAC2Q9Y5I4 1007 aa12.13□□□□□ -0.47
TEFM-201ENST00000306049 NR2E3Q9Y5X4 410 aa12.13□□□□□ -0.47
TEFM-201ENST00000306049 ARAP2Q8WZ64 1704 aa12.13□□□□□ -0.47
TEFM-201ENST00000306049 ZSWIM8A7E2V4 1837 aa12.12□□□□□ -0.47
TEFM-201ENST00000306049 A0A1W2PPC1 479 aa12.12□□□□□ -0.47
TEFM-201ENST00000306049 UNCXA6NJT0 531 aa12.12□□□□□ -0.47
TEFM-201ENST00000306049 GJA5P36382 358 aa12.12□□□□□ -0.47
TEFM-201ENST00000306049 FXR2P51116 673 aaKnown RBP eCLIP12.12□□□□□ -0.47
TEFM-201ENST00000306049 CHRNDQ07001 517 aa12.12□□□□□ -0.47
TEFM-201ENST00000306049 DDX10Q13206 875 aaKnown RBP12.12□□□□□ -0.47
TEFM-201ENST00000306049 LRCH3Q96II8 777 aa12.12□□□□□ -0.47
TEFM-201ENST00000306049 PTPN18Q99952 460 aa12.12□□□□□ -0.47
TEFM-201ENST00000306049 PLA2G12BQ9BX93 195 aa12.12□□□□□ -0.47
TEFM-201ENST00000306049 UNC80Q8N2C7 3258 aa12.12□□□□□ -0.47
TEFM-201ENST00000306049 IRS2Q9Y4H2 1338 aa12.11□□□□□ -0.47
TEFM-201ENST00000306049 CLRN2A0PK11 232 aa12.11□□□□□ -0.47
TEFM-201ENST00000306049 SOX1O00570 391 aaPredicted RBP12.11□□□□□ -0.47
TEFM-201ENST00000306049 SUPT20HL1Q3ZLR7 823 aa12.11□□□□□ -0.47
TEFM-201ENST00000306049 CFAP100Q494V2 611 aa12.11□□□□□ -0.47
TEFM-201ENST00000306049 NBPF12Q5TAG4 269 aaPredicted RBP12.11□□□□□ -0.47
TEFM-201ENST00000306049 G2E3Q7L622 706 aa12.11□□□□□ -0.47
TEFM-201ENST00000306049 STK31Q9BXU1 1019 aa12.11□□□□□ -0.47
TEFM-201ENST00000306049 ZFYVE28Q9HCC9 887 aa12.11□□□□□ -0.47
TEFM-201ENST00000306049 TESPA1A2RU30 521 aaPredicted RBP12.1□□□□□ -0.47
TEFM-201ENST00000306049 F8W031 263 aaPredicted RBP12.1□□□□□ -0.47
TEFM-201ENST00000306049 SNAP23O00161 211 aa12.1□□□□□ -0.47
TEFM-201ENST00000306049 MYO1BO43795 1136 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms