RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 GCC1Q96CN9 775 aa9.64□□□□□ -0.87
TM4SF1-201ENST00000305366 ANTXR1Q9H6X2 564 aa9.64□□□□□ -0.87
TM4SF1-201ENST00000305366 GREM2Q9H772 168 aa9.64□□□□□ -0.87
TM4SF1-201ENST00000305366 ADAMTSL1Q8N6G6 1762 aa9.64□□□□□ -0.87
TM4SF1-201ENST00000305366 ATP2B4P23634 1241 aa9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 CTSWP56202 376 aa9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 KIF23Q02241 960 aaPredicted RBP9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 TWISTNBQ3B726 338 aaPredicted RBP9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 RGMBQ6NW40 437 aa9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 RSBN1LQ6PCB5 846 aaPredicted RBP9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 UBE3BQ7Z3V4 1068 aa9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 DHX37Q8IY37 1157 aaKnown RBP9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 XDHP47989 1333 aa9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 USP17L3A6NCW0 530 aa9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 USP17L4A6NCW7 530 aa9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 USP17L8P0C7I0 530 aa9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 NOGQ13253 232 aa9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 DGKZQ13574 1117 aa9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 USP17L1Q7RTZ2 530 aa9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 TTLL11Q8NHH1 800 aa9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 CDCA5Q96FF9 252 aa9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 CDC5LQ99459 802 aaKnown RBP9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 TBC1D2Q9BYX2 928 aa9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 API5Q9BZZ5 524 aaKnown RBP9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 MINPP1Q9UNW1 487 aa9.63□□□□□ -0.87
TM4SF1-201ENST00000305366 FRAT2O75474 233 aaPredicted RBP9.62□□□□□ -0.87
TM4SF1-201ENST00000305366 TRPA1O75762 1119 aa9.62□□□□□ -0.87
TM4SF1-201ENST00000305366 TTLL12Q14166 644 aaPredicted RBP9.62□□□□□ -0.87
TM4SF1-201ENST00000305366 MOB2Q70IA6 237 aa9.62□□□□□ -0.87
TM4SF1-201ENST00000305366 CHD1LQ86WJ1 897 aa9.62□□□□□ -0.87
TM4SF1-201ENST00000305366 HHIPL1Q96JK4 782 aa9.62□□□□□ -0.87
TM4SF1-201ENST00000305366 C22orf23Q9BZE7 217 aa9.62□□□□□ -0.87
TM4SF1-201ENST00000305366 MCOLN1Q9GZU1 580 aa9.62□□□□□ -0.87
TM4SF1-201ENST00000305366 MYOZ2Q9NPC6 264 aa9.62□□□□□ -0.87
TM4SF1-201ENST00000305366 COL4A1P02462 1669 aa9.62□□□□□ -0.87
TM4SF1-201ENST00000305366 DUOX1Q9NRD9 1551 aa9.61□□□□□ -0.87
TM4SF1-201ENST00000305366 NEURL1BA8MQ27 555 aa9.61□□□□□ -0.87
TM4SF1-201ENST00000305366 FAM155AB1AL88 458 aaPredicted RBP9.61□□□□□ -0.87
TM4SF1-201ENST00000305366 IGHMBP2P38935 993 aaKnown RBP9.61□□□□□ -0.87
TM4SF1-201ENST00000305366 FKBP5Q13451 457 aaPredicted RBP9.61□□□□□ -0.87
TM4SF1-201ENST00000305366 PRKG1Q13976 671 aa9.61□□□□□ -0.87
TM4SF1-201ENST00000305366 BMP2KLQ5H9B9 411 aa9.61□□□□□ -0.87
TM4SF1-201ENST00000305366 AGBL3Q8NEM8 1001 aa9.61□□□□□ -0.87
TM4SF1-201ENST00000305366 CCDC102AQ96A19 550 aa9.61□□□□□ -0.87
TM4SF1-201ENST00000305366 BSDC1Q9NW68 430 aaPredicted RBP9.61□□□□□ -0.87
TM4SF1-201ENST00000305366 CHMP3Q9Y3E7 222 aa9.61□□□□□ -0.87
TM4SF1-201ENST00000305366 UBE2Q2LH0YL09 131 aa9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 CA12O43570 354 aa9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 KCNJ4P48050 445 aa9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 RBM25P49756 843 aaKnown RBP9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 CCT4P50991 539 aaKnown RBP9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 MKRN3Q13064 507 aaKnown RBP9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 NBPF9Q3BBW0 867 aa9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 PODNQ7Z5L7 613 aa9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 TXNRD3Q86VQ6 643 aa9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 MPHOSPH8Q99549 860 aa9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 H7C1W4 665 aa9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 SNAP23O00161 211 aa9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 ITGA6P23229 1130 aa9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 KLRK1P26718 216 aa9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 ZNF280AP59817 542 aaPredicted RBP9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 FLIIQ13045 1269 aa9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 OGFOD1Q8N543 542 aa9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 HELBQ8NG08 1087 aaPredicted RBP9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 RNF186Q9NXI6 227 aa9.6□□□□□ -0.87
TM4SF1-201ENST00000305366 F6X3S4 739 aa9.59□□□□□ -0.87
TM4SF1-201ENST00000305366 SASH1O94885 1247 aa9.59□□□□□ -0.87
TM4SF1-201ENST00000305366 MFAP1P55081 439 aaKnown RBP9.59□□□□□ -0.87
TM4SF1-201ENST00000305366 GCKRQ14397 625 aa9.59□□□□□ -0.87
TM4SF1-201ENST00000305366 KIAA0825Q8IV33 1275 aa9.59□□□□□ -0.87
TM4SF1-201ENST00000305366 CSRNP1Q96S65 589 aa9.59□□□□□ -0.87
TM4SF1-201ENST00000305366 TAF1P21675 1872 aa9.59□□□□□ -0.87
TM4SF1-201ENST00000305366 TAF5LO75529 589 aa9.58□□□□□ -0.88
TM4SF1-201ENST00000305366 GTF2IP78347 998 aa9.58□□□□□ -0.88
TM4SF1-201ENST00000305366 INTS3Q68E01 1043 aaKnown RBP9.58□□□□□ -0.88
TM4SF1-201ENST00000305366 TTLL5Q6EMB2 1281 aa9.58□□□□□ -0.88
TM4SF1-201ENST00000305366 DNAAF4Q8WXU2 420 aa9.58□□□□□ -0.88
TM4SF1-201ENST00000305366 SNX21Q969T3 373 aa9.58□□□□□ -0.88
TM4SF1-201ENST00000305366 GMLQ99445 158 aa9.58□□□□□ -0.88
TM4SF1-201ENST00000305366 LNPKQ9C0E8 428 aa9.58□□□□□ -0.88
TM4SF1-201ENST00000305366 JAG2Q9Y219 1238 aa9.58□□□□□ -0.88
TM4SF1-201ENST00000305366 ZNF804BA4D1E1 1349 aa9.58□□□□□ -0.88
TM4SF1-201ENST00000305366 F8W031 263 aaPredicted RBP9.58□□□□□ -0.88
TM4SF1-201ENST00000305366 MLLT1Q03111 559 aaPredicted RBP9.58□□□□□ -0.88
TM4SF1-201ENST00000305366 DACT2Q5SW24 774 aa9.58□□□□□ -0.88
TM4SF1-201ENST00000305366 SIRT2Q8IXJ6 389 aa9.58□□□□□ -0.88
TM4SF1-201ENST00000305366 PKNOX2Q96KN3 472 aa9.58□□□□□ -0.88
TM4SF1-201ENST00000305366 COA1Q9GZY4 146 aa9.58□□□□□ -0.88
TM4SF1-201ENST00000305366 ANKRD18BA2A2Z9 1011 aa9.57□□□□□ -0.88
TM4SF1-201ENST00000305366 TBC1D8O95759 1140 aa9.57□□□□□ -0.88
TM4SF1-201ENST00000305366 SLC10A3P09131 477 aa9.57□□□□□ -0.88
TM4SF1-201ENST00000305366 CHRNDQ07001 517 aa9.57□□□□□ -0.88
TM4SF1-201ENST00000305366 RASAL3Q86YV0 1011 aa9.57□□□□□ -0.88
TM4SF1-201ENST00000305366 ANKRD2Q9GZV1 360 aa9.57□□□□□ -0.88
TM4SF1-201ENST00000305366 SLKQ9H2G2 1235 aaPredicted RBP9.57□□□□□ -0.88
TM4SF1-201ENST00000305366 FZD1Q9UP38 647 aa9.57□□□□□ -0.88
TM4SF1-201ENST00000305366 LEMD3Q9Y2U8 911 aa9.57□□□□□ -0.88
TM4SF1-201ENST00000305366 PTPRCP08575 1304 aa9.57□□□□□ -0.88
TM4SF1-201ENST00000305366 WNT10BO00744 389 aa9.56□□□□□ -0.88
TM4SF1-201ENST00000305366 ANKRD45Q5TZF3 282 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms