RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 LRRN4CLQ8ND94 238 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 PCMTD1Q96MG8 357 aaPredicted RBP14.95□□□□□ -0.02
TRIM35-201ENST00000305364 FHOD1Q9Y613 1164 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 GIGYF1O75420 1035 aaPredicted RBP14.95□□□□□ -0.02
TRIM35-201ENST00000305364 GOLGA5Q8TBA6 731 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 PARD6BQ9BYG5 372 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 VWDEQ8N2E2 1590 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 CTAGE15A4D2H0 777 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 CTAGE8P0CG41 777 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 PFKFB1P16118 471 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 PLA2G4AP47712 749 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 CTR9Q6PD62 1173 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 RBM43Q6ZSC3 357 aaKnown RBP14.95□□□□□ -0.02
TRIM35-201ENST00000305364 CTAGE6Q86UF2 777 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 CTAGE4Q8IX94 777 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 CCDC82Q8N4S0 544 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 CEP112Q8N8E3 955 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 RRP15Q9Y3B9 282 aaKnown RBP14.95□□□□□ -0.02
TRIM35-201ENST00000305364 NEURL4Q96JN8 1562 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 SBNO1A3KN83 1393 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 A0A087WZG4 1122 aa14.94□□□□□ -0.02
TRIM35-201ENST00000305364 A0A1B0GUL7 405 aa14.94□□□□□ -0.02
TRIM35-201ENST00000305364 CDKL5O76039 1030 aa14.94□□□□□ -0.02
TRIM35-201ENST00000305364 TTC39AQ5SRH9 613 aa14.94□□□□□ -0.02
TRIM35-201ENST00000305364 PDE11AQ9HCR9 933 aa14.94□□□□□ -0.02
TRIM35-201ENST00000305364 SASH1O94885 1247 aa14.94□□□□□ -0.02
TRIM35-201ENST00000305364 H2AFXP16104 143 aaPredicted RBP14.94□□□□□ -0.02
TRIM35-201ENST00000305364 HOXC9P31274 260 aa14.94□□□□□ -0.02
TRIM35-201ENST00000305364 LONRF2Q1L5Z9 754 aa14.94□□□□□ -0.02
TRIM35-201ENST00000305364 ALG1Q9BT22 464 aa14.94□□□□□ -0.02
TRIM35-201ENST00000305364 FANCLQ9NW38 375 aa14.94□□□□□ -0.02
TRIM35-201ENST00000305364 ZNF446Q9NWS9 450 aa14.94□□□□□ -0.02
TRIM35-201ENST00000305364 FEZ2Q9UHY8 353 aaPredicted RBP14.94□□□□□ -0.02
TRIM35-201ENST00000305364 ADAM21Q9UKJ8 722 aa14.94□□□□□ -0.02
TRIM35-201ENST00000305364 PRR36Q9H6K5 1346 aa14.94□□□□□ -0.02
TRIM35-201ENST00000305364 ATP8B1O43520 1251 aa14.94□□□□□ -0.02
TRIM35-201ENST00000305364 PNOCQ13519 176 aa14.94□□□□□ -0.02
TRIM35-201ENST00000305364 MICU3Q86XE3 530 aa14.94□□□□□ -0.02
TRIM35-201ENST00000305364 CC2D1AQ6P1N0 951 aaPredicted RBP14.93□□□□□ -0.02
TRIM35-201ENST00000305364 BRAPQ7Z569 592 aa14.93□□□□□ -0.02
TRIM35-201ENST00000305364 MYSM1Q5VVJ2 828 aa14.93□□□□□ -0.02
TRIM35-201ENST00000305364 BABAM1Q9NWV8 329 aa14.93□□□□□ -0.02
TRIM35-201ENST00000305364 DEPDC5O75140 1603 aa14.93□□□□□ -0.02
TRIM35-201ENST00000305364 TRIM66O15016 1216 aa14.93□□□□□ -0.02
TRIM35-201ENST00000305364 PIP4K2AP48426 406 aaPredicted RBP14.93□□□□□ -0.02
TRIM35-201ENST00000305364 RRP12Q5JTH9 1297 aaKnown RBP14.93□□□□□ -0.02
TRIM35-201ENST00000305364 MICALL1Q8N3F8 863 aa14.93□□□□□ -0.02
TRIM35-201ENST00000305364 DRC1Q96MC2 740 aa14.93□□□□□ -0.02
TRIM35-201ENST00000305364 CTAGE9A4FU28 777 aa14.93□□□□□ -0.02
TRIM35-201ENST00000305364 PRC1O43663 620 aa14.93□□□□□ -0.02
TRIM35-201ENST00000305364 NOC3LQ8WTT2 800 aaKnown RBP14.93□□□□□ -0.02
TRIM35-201ENST00000305364 ZNF213O14771 459 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 RXRAP19793 462 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 TNNI3KQ59H18 835 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 NBPF11Q86T75 865 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 L2HGDHQ9H9P8 463 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 PAG1Q9NWQ8 432 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 FPGT-TNNI3KV9GXZ4 949 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 YEATS4O95619 227 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 ACTN2P35609 894 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 SPECC1Q5M775 1068 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 COPS6Q7L5N1 327 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 RABGGTAQ92696 567 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 INO80Q9ULG1 1556 aaPredicted RBP14.92□□□□□ -0.02
TRIM35-201ENST00000305364 ADCY9O60503 1353 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 CCDC148Q8NFR7 591 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 XAGE3Q8WTP9 111 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 CCDC85AQ96PX6 553 aaPredicted RBP14.92□□□□□ -0.02
TRIM35-201ENST00000305364 RTEL1Q9NZ71 1219 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 NFE2L3Q9Y4A8 694 aa14.92□□□□□ -0.02
TRIM35-201ENST00000305364 STX17P56962 302 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 TRMT44Q8IYL2 757 aaKnown RBP14.91□□□□□ -0.02
TRIM35-201ENST00000305364 ARAP3Q8WWN8 1544 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 ARHGEF28Q8N1W1 1705 aaKnown RBP14.91□□□□□ -0.02
TRIM35-201ENST00000305364 LMTK2Q8IWU2 1503 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 KNDC1Q76NI1 1749 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 A0A1W2PQ27 194 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 A0A1W2PQ64 194 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 A0A1W2PQD8 194 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 E7EWF7 191 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 TADA3O75528 432 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 FMR1NBQ8N0W7 255 aaPredicted RBP14.91□□□□□ -0.02
TRIM35-201ENST00000305364 LINC00301Q8NCQ3 95 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 DHX58Q96C10 678 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 NUP88Q99567 741 aaPredicted RBP14.91□□□□□ -0.02
TRIM35-201ENST00000305364 CEP126Q9P2H0 1117 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 YEATS2Q9ULM3 1422 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 PPLO60437 1756 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 TXLNAP40222 546 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 BRD3Q15059 726 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 PROSER3Q2NL68 480 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 MAP9Q49MG5 647 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 IL17RAQ96F46 866 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 METP08581 1390 aa14.91□□□□□ -0.02
TRIM35-201ENST00000305364 ANKRD65E5RJM6 399 aa14.9□□□□□ -0.02
TRIM35-201ENST00000305364 PDIA3P30101 505 aaKnown RBP14.9□□□□□ -0.02
TRIM35-201ENST00000305364 METAP2P50579 478 aaKnown RBP eCLIP14.9□□□□□ -0.02
TRIM35-201ENST00000305364 MNAT1P51948 309 aa14.9□□□□□ -0.02
TRIM35-201ENST00000305364 NCOA7Q8NI08 942 aa14.9□□□□□ -0.02
TRIM35-201ENST00000305364 EXOC4Q96A65 974 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms