RNA–Protein interactions for RNA: ENST00000304527.8

SH3D19-201, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SH3D19, Length 5,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-201ENST00000304527 NEK1Q96PY6 1258 aa7.29□□□□□ -1.24
SH3D19-201ENST00000304527 ATG3Q9NT62 314 aa7.29□□□□□ -1.24
SH3D19-201ENST00000304527 PAG1Q9NWQ8 432 aa7.29□□□□□ -1.24
SH3D19-201ENST00000304527 SYT1P21579 422 aa7.29□□□□□ -1.24
SH3D19-201ENST00000304527 TNNI2P48788 182 aa7.29□□□□□ -1.24
SH3D19-201ENST00000304527 TCIRG1Q13488 830 aa7.29□□□□□ -1.24
SH3D19-201ENST00000304527 NECTIN1Q15223 517 aa7.29□□□□□ -1.24
SH3D19-201ENST00000304527 IL25Q9H293 177 aa7.29□□□□□ -1.24
SH3D19-201ENST00000304527 AFF2P51816 1311 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 AK9Q5TCS8 1911 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 SYCE3A1L190 88 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 NBPF26B4DH59 902 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 EIF6P56537 245 aaKnown RBP7.28□□□□□ -1.24
SH3D19-201ENST00000304527 NBPF10Q6P3W6 841 aaKnown RBP7.28□□□□□ -1.24
SH3D19-201ENST00000304527 LRSAM1Q6UWE0 723 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 NBPF15Q8N660 670 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 HOOK2Q96ED9 719 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 LARP6Q9BRS8 491 aaKnown RBP7.28□□□□□ -1.24
SH3D19-201ENST00000304527 HELLSQ9NRZ9 838 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 NOL7Q9UMY1 257 aaKnown RBP7.28□□□□□ -1.24
SH3D19-201ENST00000304527 ZDHHC9Q9Y397 364 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 SCN11AQ9UI33 1791 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 COL5A2P05997 1499 aaPredicted RBP7.28□□□□□ -1.24
SH3D19-201ENST00000304527 CDKL5O76039 1030 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 CIAO1O76071 339 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 CPA1P15085 419 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 RPS6KB1P23443 525 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 PDE6BP35913 854 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 SEC63Q9UGP8 760 aaKnown RBP7.28□□□□□ -1.24
SH3D19-201ENST00000304527 RGPD5Q99666 1765 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 OFD1O75665 1012 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 APBA3O96018 575 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 ZFYP08048 801 aaPredicted RBP7.28□□□□□ -1.24
SH3D19-201ENST00000304527 RFX5P48382 616 aaPredicted RBP7.28□□□□□ -1.24
SH3D19-201ENST00000304527 UBE2HP62256 183 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 SYCP1Q15431 976 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 CCDC73Q6ZRK6 1079 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 DNAJC10Q8IXB1 793 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 ZNF444Q8N0Y2 327 aaPredicted RBP7.28□□□□□ -1.24
SH3D19-201ENST00000304527 IDH1O75874 414 aaKnown RBP7.28□□□□□ -1.24
SH3D19-201ENST00000304527 CCDC183Q5T5S1 534 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 SUPT20HQ8NEM7 779 aa7.28□□□□□ -1.24
SH3D19-201ENST00000304527 BMP2KQ9NSY1 1161 aaPredicted RBP7.28□□□□□ -1.24
SH3D19-201ENST00000304527 RBM27Q9P2N5 1060 aaKnown RBP7.28□□□□□ -1.24
SH3D19-201ENST00000304527 BIN2Q9UBW5 565 aaPredicted RBP7.28□□□□□ -1.24
SH3D19-201ENST00000304527 ARHGEF6Q15052 776 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 KCNB2Q92953 911 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 ESPNB1AK53 854 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 TAF5LO75529 589 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 PCCAP05165 728 aaPredicted RBP7.27□□□□□ -1.25
SH3D19-201ENST00000304527 HSPA1LP34931 641 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 USP48Q86UV5 1035 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 A0A1B0GUL7 405 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 ADCK5Q3MIX3 580 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 GAS2L3Q86XJ1 694 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 NECAB1Q8N987 351 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 RBM17Q96I25 401 aaKnown RBP7.27□□□□□ -1.25
SH3D19-201ENST00000304527 ADAMTS7Q9UKP4 1686 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 RNF113AO15541 343 aaKnown RBP7.27□□□□□ -1.25
SH3D19-201ENST00000304527 STK3Q13188 491 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 VPS72Q15906 364 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 ANKRD18AQ8IVF6 992 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 BICD2Q8TD16 824 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 PIK3R5Q8WYR1 880 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 WASF1Q92558 559 aa7.27□□□□□ -1.25
SH3D19-201ENST00000304527 CCDC85AQ96PX6 553 aaPredicted RBP7.27□□□□□ -1.25
SH3D19-201ENST00000304527 CCNL1Q9UK58 526 aaPredicted RBP7.27□□□□□ -1.25
SH3D19-201ENST00000304527 PARP4Q9UKK3 1724 aaKnown RBP7.26□□□□□ -1.25
SH3D19-201ENST00000304527 MED23Q9ULK4 1368 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 VASPP50552 380 aaPredicted RBP7.26□□□□□ -1.25
SH3D19-201ENST00000304527 ZNF804AQ7Z570 1209 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 EDC3Q96F86 508 aaKnown RBP7.26□□□□□ -1.25
SH3D19-201ENST00000304527 SCAND2PQ9GZW5 306 aaPredicted RBP7.26□□□□□ -1.25
SH3D19-201ENST00000304527 GDPD2Q9HCC8 539 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 MATR3P43243 847 aaKnown RBP eCLIP7.26□□□□□ -1.252e-6■■□□□ 13.4
SH3D19-201ENST00000304527 TRIM28Q13263 835 aaKnown RBP7.26□□□□□ -1.25
SH3D19-201ENST00000304527 DPY19L2Q6NUT2 758 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 LRP10Q7Z4F1 713 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 GPT2Q8TD30 523 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 VTI1AQ96AJ9 217 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 ZC3H12CQ9C0D7 883 aaKnown RBP7.26□□□□□ -1.25
SH3D19-201ENST00000304527 SNRKQ9NRH2 765 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 SH3TC1Q8TE82 1336 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 GPTP24298 496 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 TIMM10P62072 90 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 HMGN5P82970 282 aaKnown RBP7.26□□□□□ -1.25
SH3D19-201ENST00000304527 FOXO4P98177 505 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 ATP2B3Q16720 1220 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 GRIPAP1Q4V328 841 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 ZFYVE27Q5T4F4 411 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 LDHAL6AQ6ZMR3 332 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 JMYQ8N9B5 988 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 ISCA1Q9BUE6 129 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 CNPY2Q9Y2B0 182 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 MAP3K15Q6ZN16 1313 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 CHMP4BP1P59074 171 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 IMMTQ16891 758 aaKnown RBP7.26□□□□□ -1.25
SH3D19-201ENST00000304527 CCDC96Q2M329 555 aa7.26□□□□□ -1.25
SH3D19-201ENST00000304527 ZBTB38Q8NAP3 1195 aaPredicted RBP7.26□□□□□ -1.25
SH3D19-201ENST00000304527 DSCC1Q9BVC3 393 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms