RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 FAM89AQ96GI7 184 aa8.51□□□□□ -1.05
RGPD3-201ENST00000304514 CDK5RAP2Q96SN8 1893 aa8.51□□□□□ -1.05
RGPD3-201ENST00000304514 MAP3K11Q16584 847 aa8.51□□□□□ -1.05
RGPD3-201ENST00000304514 TNRC6CQ9HCJ0 1690 aaKnown RBP8.51□□□□□ -1.05
RGPD3-201ENST00000304514 DDX60LQ5H9U9 1706 aaKnown RBP8.5□□□□□ -1.05
RGPD3-201ENST00000304514 CCDC192P0DO97 292 aa8.5□□□□□ -1.05
RGPD3-201ENST00000304514 ITGA6P23229 1130 aa8.5□□□□□ -1.05
RGPD3-201ENST00000304514 CAMK4Q16566 473 aa8.5□□□□□ -1.05
RGPD3-201ENST00000304514 CCDC158Q5M9N0 1113 aa8.5□□□□□ -1.05
RGPD3-201ENST00000304514 ZNF34Q8IZ26 560 aa8.5□□□□□ -1.05
RGPD3-201ENST00000304514 DDX19AQ9NUU7 478 aaKnown RBP8.5□□□□□ -1.05
RGPD3-201ENST00000304514 MYH6P13533 1939 aa8.5□□□□□ -1.05
RGPD3-201ENST00000304514 BTAF1O14981 1849 aa8.5□□□□□ -1.05
RGPD3-201ENST00000304514 ZFYP08048 801 aaPredicted RBP8.5□□□□□ -1.05
RGPD3-201ENST00000304514 FGFR2P21802 821 aa8.5□□□□□ -1.05
RGPD3-201ENST00000304514 KIAA2012Q0VF49 1180 aa8.5□□□□□ -1.05
RGPD3-201ENST00000304514 PIBF1Q8WXW3 757 aa8.5□□□□□ -1.05
RGPD3-201ENST00000304514 NEDD4P46934 1319 aa8.5□□□□□ -1.05
RGPD3-201ENST00000304514 ADD2P35612 726 aa8.5□□□□□ -1.05
RGPD3-201ENST00000304514 BTG4Q9NY30 223 aa8.5□□□□□ -1.05
RGPD3-201ENST00000304514 DACT1Q9NYF0 836 aa8.5□□□□□ -1.05
RGPD3-201ENST00000304514 PI16Q6UXB8 463 aa8.5□□□□□ -1.05
RGPD3-201ENST00000304514 PIH1D3Q9NQM4 214 aaKnown RBP8.5□□□□□ -1.05
RGPD3-201ENST00000304514 ERVV-1B6SEH8 477 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 FAM200AQ8TCP9 573 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 NCOA5Q9HCD5 579 aaKnown RBP8.49□□□□□ -1.05
RGPD3-201ENST00000304514 EVA1CP58658 441 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 ATL3Q6DD88 541 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 ENGASEQ8NFI3 743 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 TDRD7Q8NHU6 1098 aaKnown RBP8.49□□□□□ -1.05
RGPD3-201ENST00000304514 FTOQ9C0B1 505 aaKnown RBP eCLIP8.49□□□□□ -1.05
RGPD3-201ENST00000304514 CBX8Q9HC52 389 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 RCOR1Q9UKL0 485 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 STARD3NLO95772 234 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 CDC25BP30305 580 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 ANO6Q4KMQ2 910 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 APPBP2Q92624 585 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 AK7Q96M32 723 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 TFIP11Q9UBB9 837 aaKnown RBP8.49□□□□□ -1.05
RGPD3-201ENST00000304514 COL1A1P02452 1464 aaPredicted RBP8.49□□□□□ -1.05
RGPD3-201ENST00000304514 FGAP02671 866 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 HMGN5P82970 282 aaKnown RBP8.49□□□□□ -1.05
RGPD3-201ENST00000304514 TPRNQ4KMQ1 711 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 CHST3Q7LGC8 479 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 ZNF830Q96NB3 372 aaPredicted RBP8.49□□□□□ -1.05
RGPD3-201ENST00000304514 TNMDQ9H2S6 317 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 RTL9Q8NET4 1388 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 FKBP4Q02790 459 aaKnown RBP eCLIP8.49□□□□□ -1.05
RGPD3-201ENST00000304514 IFIT5Q13325 482 aaKnown RBP8.49□□□□□ -1.05
RGPD3-201ENST00000304514 INTS5Q6P9B9 1019 aaKnown RBP8.49□□□□□ -1.05
RGPD3-201ENST00000304514 TBC1D10CQ8IV04 446 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 DHX40Q8IX18 779 aaKnown RBP8.49□□□□□ -1.05
RGPD3-201ENST00000304514 CEP126Q9P2H0 1117 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 TACC3Q9Y6A5 838 aa8.49□□□□□ -1.05
RGPD3-201ENST00000304514 CCDC88AQ3V6T2 1871 aa8.48□□□□□ -1.05
RGPD3-201ENST00000304514 DNAJC5Q9H3Z4 198 aa8.48□□□□□ -1.05
RGPD3-201ENST00000304514 GPHNQ9NQX3 736 aaPredicted RBP8.48□□□□□ -1.05
RGPD3-201ENST00000304514 CCT2P78371 535 aaKnown RBP8.48□□□□□ -1.05
RGPD3-201ENST00000304514 HSP90AB3PQ58FF7 597 aa8.48□□□□□ -1.05
RGPD3-201ENST00000304514 CYB5R4Q7L1T6 521 aa8.48□□□□□ -1.05
RGPD3-201ENST00000304514 CFAP45Q9UL16 551 aa8.48□□□□□ -1.05
RGPD3-201ENST00000304514 FOCADQ5VW36 1801 aa8.48□□□□□ -1.05
RGPD3-201ENST00000304514 KIF28PB7ZC32 967 aa8.48□□□□□ -1.05
RGPD3-201ENST00000304514 H3BQV1 296 aa8.48□□□□□ -1.05
RGPD3-201ENST00000304514 IFFO2Q5TF58 517 aa8.48□□□□□ -1.05
RGPD3-201ENST00000304514 LUZP1Q86V48 1076 aa8.48□□□□□ -1.05
RGPD3-201ENST00000304514 IMMTQ16891 758 aaKnown RBP8.47□□□□□ -1.05
RGPD3-201ENST00000304514 MROH5Q6ZUA9 1318 aa8.47□□□□□ -1.05
RGPD3-201ENST00000304514 ZBTB1Q9Y2K1 713 aa8.47□□□□□ -1.05
RGPD3-201ENST00000304514 NAV1Q8NEY1 1877 aa8.47□□□□□ -1.05
RGPD3-201ENST00000304514 IRS4O14654 1257 aaPredicted RBP8.47□□□□□ -1.05
RGPD3-201ENST00000304514 GPAA1O43292 621 aa8.47□□□□□ -1.05
RGPD3-201ENST00000304514 PDE8AO60658 829 aa8.47□□□□□ -1.05
RGPD3-201ENST00000304514 ATP2B3Q16720 1220 aa8.47□□□□□ -1.05
RGPD3-201ENST00000304514 SASS6Q6UVJ0 657 aa8.47□□□□□ -1.05
RGPD3-201ENST00000304514 RTEL1Q9NZ71 1219 aa8.47□□□□□ -1.05
RGPD3-201ENST00000304514 CTNNA3Q9UI47 895 aa8.47□□□□□ -1.05
RGPD3-201ENST00000304514 ANKRD18BA2A2Z9 1011 aa8.47□□□□□ -1.05
RGPD3-201ENST00000304514 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.47□□□□□ -1.05
RGPD3-201ENST00000304514 CCAR1Q8IX12 1150 aaKnown RBP8.47□□□□□ -1.05
RGPD3-201ENST00000304514 CKAP2LQ8IYA6 745 aa8.47□□□□□ -1.05
RGPD3-201ENST00000304514 USP28Q96RU2 1077 aa8.47□□□□□ -1.05
RGPD3-201ENST00000304514 SH2B2O14492 632 aaPredicted RBP8.47□□□□□ -1.05
RGPD3-201ENST00000304514 PRC1O43663 620 aa8.47□□□□□ -1.05
RGPD3-201ENST00000304514 IL6STP40189 918 aaPredicted RBP8.47□□□□□ -1.05
RGPD3-201ENST00000304514 DENND2AQ9ULE3 1009 aa8.47□□□□□ -1.05
RGPD3-201ENST00000304514 IQCB1Q15051 598 aa8.46□□□□□ -1.05
RGPD3-201ENST00000304514 TTF1Q15361 905 aaPredicted RBP8.46□□□□□ -1.05
RGPD3-201ENST00000304514 UBE3CQ15386 1083 aa8.46□□□□□ -1.05
RGPD3-201ENST00000304514 C11orf57Q6ZUT1 292 aaPredicted RBP8.46□□□□□ -1.05
RGPD3-201ENST00000304514 PYCARDQ9ULZ3 195 aa8.46□□□□□ -1.05
RGPD3-201ENST00000304514 R3HCC1Q9Y3T6 440 aaKnown RBP8.46□□□□□ -1.05
RGPD3-201ENST00000304514 SPATA31A1Q5TZJ5 1347 aa8.46□□□□□ -1.05
RGPD3-201ENST00000304514 LRRFIP1Q32MZ4 808 aaKnown RBP8.46□□□□□ -1.05
RGPD3-201ENST00000304514 CCDC85AQ96PX6 553 aaPredicted RBP8.46□□□□□ -1.05
RGPD3-201ENST00000304514 PDE8BO95263 885 aa8.46□□□□□ -1.06
RGPD3-201ENST00000304514 GTF2F1P35269 517 aaKnown RBP eCLIP8.46□□□□□ -1.06
RGPD3-201ENST00000304514 ZNF75DP51815 510 aa8.46□□□□□ -1.06
RGPD3-201ENST00000304514 METTL24Q5JXM2 366 aa8.46□□□□□ -1.06
RGPD3-201ENST00000304514 SARM1Q6SZW1 724 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms