RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 TEX35Q5T0J7 233 aa9.26□□□□□ -0.93
NKRF-201ENST00000304449 NAA16Q6N069 864 aaPredicted RBP9.26□□□□□ -0.93
NKRF-201ENST00000304449 RIC3Q7Z5B4 369 aa9.26□□□□□ -0.93
NKRF-201ENST00000304449 ERO1AQ96HE7 468 aa9.26□□□□□ -0.93
NKRF-201ENST00000304449 KCND1Q9NSA2 647 aa9.26□□□□□ -0.93
NKRF-201ENST00000304449 U3KPZ7 1027 aaPredicted RBP9.26□□□□□ -0.93
NKRF-201ENST00000304449 STRCP1A6NGW2 1772 aa9.26□□□□□ -0.93
NKRF-201ENST00000304449 H7C1W4 665 aa9.26□□□□□ -0.93
NKRF-201ENST00000304449 KBTBD3Q8NAB2 608 aa9.26□□□□□ -0.93
NKRF-201ENST00000304449 CCDC191Q8NCU4 936 aa9.26□□□□□ -0.93
NKRF-201ENST00000304449 CYP27B1O15528 508 aa9.25□□□□□ -0.93
NKRF-201ENST00000304449 CYP2C19P33261 490 aa9.25□□□□□ -0.93
NKRF-201ENST00000304449 ANKRD65E5RJM6 399 aa9.25□□□□□ -0.93
NKRF-201ENST00000304449 MYL6BP14649 208 aa9.25□□□□□ -0.93
NKRF-201ENST00000304449 SYCP1Q15431 976 aa9.25□□□□□ -0.93
NKRF-201ENST00000304449 SLFNL1Q499Z3 407 aa9.25□□□□□ -0.93
NKRF-201ENST00000304449 C11orf57Q6ZUT1 292 aaPredicted RBP9.25□□□□□ -0.93
NKRF-201ENST00000304449 DHX40Q8IX18 779 aaKnown RBP9.25□□□□□ -0.93
NKRF-201ENST00000304449 DSCC1Q9BVC3 393 aa9.25□□□□□ -0.93
NKRF-201ENST00000304449 GPR108Q9NPR9 543 aa9.25□□□□□ -0.93
NKRF-201ENST00000304449 LCMT1Q9UIC8 334 aa9.25□□□□□ -0.93
NKRF-201ENST00000304449 PNMA6AP0CW24 399 aaPredicted RBP9.25□□□□□ -0.93
NKRF-201ENST00000304449 FDPSP14324 419 aaKnown RBP9.25□□□□□ -0.93
NKRF-201ENST00000304449 TMCO3Q6UWJ1 677 aa9.25□□□□□ -0.93
NKRF-201ENST00000304449 UBXN4Q92575 508 aa9.25□□□□□ -0.93
NKRF-201ENST00000304449 CAVIN2O95810 425 aa9.24□□□□□ -0.93
NKRF-201ENST00000304449 LMAN1P49257 510 aa9.24□□□□□ -0.93
NKRF-201ENST00000304449 ZMYM1Q5SVZ6 1142 aa9.24□□□□□ -0.93
NKRF-201ENST00000304449 MNS1Q8NEH6 495 aa9.24□□□□□ -0.93
NKRF-201ENST00000304449 FTOQ9C0B1 505 aaKnown RBP eCLIP9.24□□□□□ -0.93
NKRF-201ENST00000304449 RASSF4Q9H2L5 321 aa9.24□□□□□ -0.93
NKRF-201ENST00000304449 HELLSQ9NRZ9 838 aa9.24□□□□□ -0.93
NKRF-201ENST00000304449 ECM29Q5VYK3 1845 aa9.24□□□□□ -0.93
NKRF-201ENST00000304449 NBPF26B4DH59 902 aa9.24□□□□□ -0.93
NKRF-201ENST00000304449 TULP2O00295 520 aa9.24□□□□□ -0.93
NKRF-201ENST00000304449 SNRPA1P09661 255 aaKnown RBP9.24□□□□□ -0.93
NKRF-201ENST00000304449 PTPN21Q16825 1174 aa9.24□□□□□ -0.93
NKRF-201ENST00000304449 NBPF14Q5TI25 921 aa9.24□□□□□ -0.93
NKRF-201ENST00000304449 NBPF10Q6P3W6 841 aaKnown RBP9.24□□□□□ -0.93
NKRF-201ENST00000304449 DHX32Q7L7V1 743 aaKnown RBP9.24□□□□□ -0.93
NKRF-201ENST00000304449 KRT28Q7Z3Y7 464 aa9.24□□□□□ -0.93
NKRF-201ENST00000304449 NBPF15Q8N660 670 aa9.24□□□□□ -0.93
NKRF-201ENST00000304449 GPATCH11Q8N954 259 aa9.24□□□□□ -0.93
NKRF-201ENST00000304449 SMARCE1Q969G3 411 aa9.24□□□□□ -0.93
NKRF-201ENST00000304449 MRFAP1L1Q96HT8 127 aa9.24□□□□□ -0.93
NKRF-201ENST00000304449 URI1O94763 535 aaPredicted RBP9.23□□□□□ -0.93
NKRF-201ENST00000304449 SMC2O95347 1197 aa9.23□□□□□ -0.93
NKRF-201ENST00000304449 NEXNQ0ZGT2 675 aa9.23□□□□□ -0.93
NKRF-201ENST00000304449 PLBD2Q8NHP8 589 aa9.23□□□□□ -0.93
NKRF-201ENST00000304449 DNAI1Q9UI46 699 aa9.23□□□□□ -0.93
NKRF-201ENST00000304449 NPM3O75607 178 aaKnown RBP9.23□□□□□ -0.93
NKRF-201ENST00000304449 PLA2G4AP47712 749 aa9.23□□□□□ -0.93
NKRF-201ENST00000304449 ATL3Q6DD88 541 aa9.23□□□□□ -0.93
NKRF-201ENST00000304449 NYAP1Q6ZVC0 841 aa9.23□□□□□ -0.93
NKRF-201ENST00000304449 UBE3BQ7Z3V4 1068 aa9.23□□□□□ -0.93
NKRF-201ENST00000304449 ZSWIM4Q9H7M6 989 aa9.23□□□□□ -0.93
NKRF-201ENST00000304449 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.23□□□□□ -0.93
NKRF-201ENST00000304449 HMGB1P09429 215 aaKnown RBP9.23□□□□□ -0.93
NKRF-201ENST00000304449 HSPD1P10809 573 aaKnown RBP9.23□□□□□ -0.93
NKRF-201ENST00000304449 GTF2A1P52655 376 aaPredicted RBP9.23□□□□□ -0.93
NKRF-201ENST00000304449 ZSCAN26Q16670 478 aa9.23□□□□□ -0.93
NKRF-201ENST00000304449 NBPF11Q86T75 865 aa9.23□□□□□ -0.93
NKRF-201ENST00000304449 ZNF274Q96GC6 653 aaPredicted RBP9.23□□□□□ -0.93
NKRF-201ENST00000304449 DCAF5Q96JK2 942 aa9.23□□□□□ -0.93
NKRF-201ENST00000304449 USP28Q96RU2 1077 aa9.23□□□□□ -0.93
NKRF-201ENST00000304449 CFAP45Q9UL16 551 aa9.23□□□□□ -0.93
NKRF-201ENST00000304449 FHOD1Q9Y613 1164 aa9.23□□□□□ -0.93
NKRF-201ENST00000304449 LOC102724159A0A0B4J2E5 919 aa9.22□□□□□ -0.93
NKRF-201ENST00000304449 E7EWF7 191 aa9.22□□□□□ -0.93
NKRF-201ENST00000304449 PDIA3P30101 505 aaKnown RBP9.22□□□□□ -0.93
NKRF-201ENST00000304449 PIP4K2AP48426 406 aaPredicted RBP9.22□□□□□ -0.93
NKRF-201ENST00000304449 PWP2Q15269 919 aaKnown RBP9.22□□□□□ -0.93
NKRF-201ENST00000304449 DDX46Q7L014 1031 aaKnown RBP9.22□□□□□ -0.93
NKRF-201ENST00000304449 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.22□□□□□ -0.93
NKRF-201ENST00000304449 MYH7P12883 1935 aa9.22□□□□□ -0.93
NKRF-201ENST00000304449 AKAP11Q9UKA4 1901 aa9.22□□□□□ -0.93
NKRF-201ENST00000304449 TNS2Q63HR2 1409 aa9.22□□□□□ -0.93
NKRF-201ENST00000304449 TOGARAM1Q9Y4F4 1720 aa9.22□□□□□ -0.93
NKRF-201ENST00000304449 CCZ1BP86790 482 aa9.22□□□□□ -0.93
NKRF-201ENST00000304449 CCZ1P86791 482 aaPredicted RBP9.22□□□□□ -0.93
NKRF-201ENST00000304449 ISM2Q6H9L7 571 aa9.22□□□□□ -0.93
NKRF-201ENST00000304449 IFNL2Q8IZJ0 200 aa9.22□□□□□ -0.93
NKRF-201ENST00000304449 FMR1NBQ8N0W7 255 aaPredicted RBP9.22□□□□□ -0.93
NKRF-201ENST00000304449 LRRC2Q9BYS8 371 aa9.22□□□□□ -0.93
NKRF-201ENST00000304449 MAST3O60307 1309 aa9.22□□□□□ -0.93
NKRF-201ENST00000304449 PTPDC1A2A3K4 754 aa9.22□□□□□ -0.93
NKRF-201ENST00000304449 MYO1CO00159 1063 aa9.22□□□□□ -0.93
NKRF-201ENST00000304449 OAS2P29728 719 aaKnown RBP9.22□□□□□ -0.93
NKRF-201ENST00000304449 APOBRQ0VD83 1088 aa9.22□□□□□ -0.93
NKRF-201ENST00000304449 ARGLU1Q9NWB6 273 aaPredicted RBP9.22□□□□□ -0.93
NKRF-201ENST00000304449 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.21□□□□□ -0.93
NKRF-201ENST00000304449 CARMIL3Q8ND23 1372 aa9.21□□□□□ -0.93
NKRF-201ENST00000304449 A0A087WZG4 1122 aa9.21□□□□□ -0.93
NKRF-201ENST00000304449 TPM4P67936 248 aa9.21□□□□□ -0.93
NKRF-201ENST00000304449 GPS2Q13227 327 aa9.21□□□□□ -0.93
NKRF-201ENST00000304449 LMBR1LQ6UX01 489 aa9.21□□□□□ -0.93
NKRF-201ENST00000304449 AOPEPQ8N6M6 819 aa9.21□□□□□ -0.93
NKRF-201ENST00000304449 ATG3Q9NT62 314 aa9.21□□□□□ -0.93
NKRF-201ENST00000304449 PAG1Q9NWQ8 432 aa9.21□□□□□ -0.93
NKRF-201ENST00000304449 FAM53CQ9NYF3 392 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms