RNA–Protein interactions for RNA: ENST00000302102.9

ATP1A3-201, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene ATP1A3, Length 3,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-201ENST00000302102 ZAP70P43403 619 aa13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 UBASH3AP57075 661 aa13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 KARSQ15046 597 aaKnown RBP13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 ZNF827Q17R98 1081 aa13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 ARHGEF25Q86VW2 580 aa13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 UTP14AQ9BVJ6 771 aaKnown RBP13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 RAI14Q9P0K7 980 aa13.15□□□□□ -0.3
ATP1A3-201ENST00000302102 VIRMAQ69YN4 1812 aaKnown RBP13.15□□□□□ -0.31
ATP1A3-201ENST00000302102 ATP2B3Q16720 1220 aa13.14□□□□□ -0.31
ATP1A3-201ENST00000302102 CCDC144BQ3MJ40 725 aa13.14□□□□□ -0.31
ATP1A3-201ENST00000302102 KCNF1Q9H3M0 494 aa13.14□□□□□ -0.31
ATP1A3-201ENST00000302102 ZNF142P52746 1687 aaPredicted RBP13.14□□□□□ -0.31
ATP1A3-201ENST00000302102 USP27XA6NNY8 438 aa13.14□□□□□ -0.31
ATP1A3-201ENST00000302102 RANBP6O60518 1105 aaKnown RBP13.14□□□□□ -0.31
ATP1A3-201ENST00000302102 IARSP41252 1262 aaKnown RBP13.14□□□□□ -0.31
ATP1A3-201ENST00000302102 TRMT44Q8IYL2 757 aaKnown RBP13.14□□□□□ -0.31
ATP1A3-201ENST00000302102 KBTBD3Q8NAB2 608 aa13.14□□□□□ -0.31
ATP1A3-201ENST00000302102 CLIC4Q9Y696 253 aa13.14□□□□□ -0.31
ATP1A3-201ENST00000302102 KNDC1Q76NI1 1749 aa13.14□□□□□ -0.31
ATP1A3-201ENST00000302102 GTF2F1P35269 517 aaKnown RBP eCLIP13.14□□□□□ -0.31
ATP1A3-201ENST00000302102 GNG11P61952 73 aa13.14□□□□□ -0.31
ATP1A3-201ENST00000302102 CLIC6Q96NY7 704 aa13.14□□□□□ -0.31
ATP1A3-201ENST00000302102 SLC52A2Q9HAB3 445 aa13.14□□□□□ -0.31
ATP1A3-201ENST00000302102 AOX1Q06278 1338 aa13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 XRN1Q8IZH2 1706 aaKnown RBP13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 HMGB1P09429 215 aaKnown RBP13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 NDUFA8P51970 172 aa13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 NCOA7Q8NI08 942 aa13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 EEF2KMTQ96G04 330 aa13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 XPO4Q9C0E2 1151 aaKnown RBP13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 TMOD3Q9NYL9 352 aa13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 SLC12A7Q9Y666 1083 aa13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 MST1RQ04912 1400 aa13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 ITSN1Q15811 1721 aa13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 ADCY9O60503 1353 aa13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 CHD2O14647 1828 aaKnown RBP13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 TOM1O60784 492 aa13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 PRDM1O75626 825 aa13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 HSPD1P10809 573 aaKnown RBP13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 DPCR1Q3MIW9 517 aa13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 TRIM22Q8IYM9 498 aa13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 CCDC34Q96HJ3 373 aa13.13□□□□□ -0.31
ATP1A3-201ENST00000302102 RNF113AO15541 343 aaKnown RBP13.12□□□□□ -0.31
ATP1A3-201ENST00000302102 CCDC24Q8N4L8 307 aa13.12□□□□□ -0.31
ATP1A3-201ENST00000302102 UBAC1Q9BSL1 405 aa13.12□□□□□ -0.31
ATP1A3-201ENST00000302102 TM6SF1Q9BZW5 370 aa13.12□□□□□ -0.31
ATP1A3-201ENST00000302102 NALCNQ8IZF0 1738 aa13.12□□□□□ -0.31
ATP1A3-201ENST00000302102 ADGRB2O60241 1585 aa13.12□□□□□ -0.31
ATP1A3-201ENST00000302102 PTPN12Q05209 780 aaKnown RBP13.12□□□□□ -0.31
ATP1A3-201ENST00000302102 JMYQ8N9B5 988 aa13.12□□□□□ -0.31
ATP1A3-201ENST00000302102 KCNJ14Q9UNX9 436 aa13.12□□□□□ -0.31
ATP1A3-201ENST00000302102 MAPK8IP1Q9UQF2 711 aa13.12□□□□□ -0.31
ATP1A3-201ENST00000302102 FAM160A1Q05DH4 1040 aa13.12□□□□□ -0.31
ATP1A3-201ENST00000302102 ERCC6LQ2NKX8 1250 aa13.12□□□□□ -0.31
ATP1A3-201ENST00000302102 LZTFL1Q9NQ48 299 aa13.12□□□□□ -0.31
ATP1A3-201ENST00000302102 PCDHA7Q9UN72 937 aa13.12□□□□□ -0.31
ATP1A3-201ENST00000302102 SPATA31A3Q5VYP0 1347 aa13.12□□□□□ -0.31
ATP1A3-201ENST00000302102 DNA2P51530 1060 aa13.11□□□□□ -0.31
ATP1A3-201ENST00000302102 SART3Q15020 963 aaKnown RBP13.11□□□□□ -0.31
ATP1A3-201ENST00000302102 XAGE2Q96GT9 111 aa13.11□□□□□ -0.31
ATP1A3-201ENST00000302102 FAM193AP78312 1265 aa13.11□□□□□ -0.31
ATP1A3-201ENST00000302102 ARHGAP29Q52LW3 1261 aa13.11□□□□□ -0.31
ATP1A3-201ENST00000302102 ARGLU1Q9NWB6 273 aaPredicted RBP13.11□□□□□ -0.31
ATP1A3-201ENST00000302102 BTG4Q9NY30 223 aa13.11□□□□□ -0.31
ATP1A3-201ENST00000302102 GPAA1O43292 621 aa13.11□□□□□ -0.31
ATP1A3-201ENST00000302102 ATP5JP18859 108 aa13.11□□□□□ -0.31
ATP1A3-201ENST00000302102 ERCC3P19447 782 aa13.11□□□□□ -0.31
ATP1A3-201ENST00000302102 IL15P40933 162 aaPredicted RBP13.11□□□□□ -0.31
ATP1A3-201ENST00000302102 CTDSPL2Q05D32 466 aa13.11□□□□□ -0.31
ATP1A3-201ENST00000302102 PNOCQ13519 176 aa13.11□□□□□ -0.31
ATP1A3-201ENST00000302102 PLIN2Q99541 437 aa13.11□□□□□ -0.31
ATP1A3-201ENST00000302102 CTAGE5O15320 804 aa13.1□□□□□ -0.31
ATP1A3-201ENST00000302102 ZNF202O95125 648 aa13.1□□□□□ -0.31
ATP1A3-201ENST00000302102 PPARDQ03181 441 aa13.1□□□□□ -0.31
ATP1A3-201ENST00000302102 ACSBG1Q96GR2 724 aa13.1□□□□□ -0.31
ATP1A3-201ENST00000302102 USP32Q8NFA0 1604 aa13.1□□□□□ -0.31
ATP1A3-201ENST00000302102 FGAP02671 866 aa13.1□□□□□ -0.31
ATP1A3-201ENST00000302102 HINFPQ9BQA5 517 aa13.1□□□□□ -0.31
ATP1A3-201ENST00000302102 HOOK1Q9UJC3 728 aaKnown RBP13.1□□□□□ -0.31
ATP1A3-201ENST00000302102 SSH2Q76I76 1423 aa13.1□□□□□ -0.31
ATP1A3-201ENST00000302102 EYA2O00167 538 aa13.1□□□□□ -0.31
ATP1A3-201ENST00000302102 ZBTB43O43298 467 aa13.1□□□□□ -0.31
ATP1A3-201ENST00000302102 ATP1A3P13637 1013 aa13.1□□□□□ -0.31
ATP1A3-201ENST00000302102 LONRF3Q496Y0 759 aa13.1□□□□□ -0.31
ATP1A3-201ENST00000302102 STOX1Q6ZVD7 989 aa13.1□□□□□ -0.31
ATP1A3-201ENST00000302102 USP31Q70CQ4 1352 aa13.1□□□□□ -0.31
ATP1A3-201ENST00000302102 KDRP35968 1356 aa13.09□□□□□ -0.31
ATP1A3-201ENST00000302102 PHACTR2O75167 634 aa13.09□□□□□ -0.31
ATP1A3-201ENST00000302102 TPM1P09493 284 aa13.09□□□□□ -0.31
ATP1A3-201ENST00000302102 PDIA3P30101 505 aaKnown RBP13.09□□□□□ -0.31
ATP1A3-201ENST00000302102 PPFIBP1Q86W92 1011 aa13.09□□□□□ -0.31
ATP1A3-201ENST00000302102 NSUN7Q8NE18 718 aaKnown RBP13.09□□□□□ -0.31
ATP1A3-201ENST00000302102 ZCRB1Q8TBF4 217 aaKnown RBP13.09□□□□□ -0.31
ATP1A3-201ENST00000302102 OSBP2Q969R2 916 aa13.09□□□□□ -0.31
ATP1A3-201ENST00000302102 GOLPH3LQ9H4A5 285 aa13.09□□□□□ -0.31
ATP1A3-201ENST00000302102 MARCH6O60337 910 aa13.09□□□□□ -0.31
ATP1A3-201ENST00000302102 LRRC8AQ8IWT6 810 aa13.09□□□□□ -0.31
ATP1A3-201ENST00000302102 DHX58Q96C10 678 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms