RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.61■■□□□ 1.21
SPSB3-201ENST00000301717 DDX19BQ9UMR2 479 aa22.61■■□□□ 1.21
SPSB3-201ENST00000301717 CHAF1AQ13111 956 aaPredicted RBP22.6■■□□□ 1.21
SPSB3-201ENST00000301717 GLIS2Q9BZE0 524 aaPredicted RBP22.6■■□□□ 1.21
SPSB3-201ENST00000301717 MYOZ2Q9NPC6 264 aa22.6■■□□□ 1.21
SPSB3-201ENST00000301717 ZBTB40Q9NUA8 1239 aa22.6■■□□□ 1.21
SPSB3-201ENST00000301717 PASKQ96RG2 1323 aa22.6■■□□□ 1.21
SPSB3-201ENST00000301717 SASH1O94885 1247 aa22.59■■□□□ 1.21
SPSB3-201ENST00000301717 APLP1P51693 650 aa22.59■■□□□ 1.21
SPSB3-201ENST00000301717 TIMM10P62072 90 aa22.59■■□□□ 1.21
SPSB3-201ENST00000301717 PDE3AQ14432 1141 aa22.59■■□□□ 1.21
SPSB3-201ENST00000301717 GRIK5Q16478 980 aa22.59■■□□□ 1.21
SPSB3-201ENST00000301717 CAVIN4Q5BKX8 364 aa22.59■■□□□ 1.21
SPSB3-201ENST00000301717 SCAF8Q9UPN6 1271 aaKnown RBP22.59■■□□□ 1.21
SPSB3-201ENST00000301717 PCDHAC2Q9Y5I4 1007 aa22.59■■□□□ 1.21
SPSB3-201ENST00000301717 RRP1P56182 461 aaKnown RBP22.58■■□□□ 1.21
SPSB3-201ENST00000301717 FAM205AQ6ZU69 1335 aa22.57■■□□□ 1.2
SPSB3-201ENST00000301717 MYO3BQ8WXR4 1341 aa22.57■■□□□ 1.2
SPSB3-201ENST00000301717 SURF6O75683 361 aaKnown RBP22.57■■□□□ 1.2
SPSB3-201ENST00000301717 G3BP1Q13283 466 aaKnown RBP eCLIP22.57■■□□□ 1.2
SPSB3-201ENST00000301717 PGAP2Q9UHJ9 254 aa22.57■■□□□ 1.2
SPSB3-201ENST00000301717 COL1A1P02452 1464 aaPredicted RBP22.57■■□□□ 1.2
SPSB3-201ENST00000301717 A0A1B0GUL7 405 aa22.57■■□□□ 1.2
SPSB3-201ENST00000301717 FRAT2O75474 233 aaPredicted RBP22.57■■□□□ 1.2
SPSB3-201ENST00000301717 PHKA1P46020 1223 aa22.57■■□□□ 1.2
SPSB3-201ENST00000301717 SCARF1Q14162 830 aa22.57■■□□□ 1.2
SPSB3-201ENST00000301717 NBPF9Q3BBW0 867 aa22.57■■□□□ 1.2
SPSB3-201ENST00000301717 SIRT2Q8IXJ6 389 aa22.57■■□□□ 1.2
SPSB3-201ENST00000301717 GGA3Q9NZ52 723 aa22.57■■□□□ 1.2
SPSB3-201ENST00000301717 OS9Q13438 667 aaPredicted RBP22.56■■□□□ 1.2
SPSB3-201ENST00000301717 MFSD14BQ5SR56 506 aa22.56■■□□□ 1.2
SPSB3-201ENST00000301717 USP48Q86UV5 1035 aa22.56■■□□□ 1.2
SPSB3-201ENST00000301717 ADM5C9JUS6 153 aa22.55■■□□□ 1.2
SPSB3-201ENST00000301717 OGFOD1Q8N543 542 aa22.55■■□□□ 1.2
SPSB3-201ENST00000301717 ZC3H15Q8WU90 426 aaKnown RBP22.55■■□□□ 1.2
SPSB3-201ENST00000301717 EXOC6BQ9Y2D4 811 aa22.55■■□□□ 1.2
SPSB3-201ENST00000301717 AOX1Q06278 1338 aa22.54■■□□□ 1.2
SPSB3-201ENST00000301717 ANGEL2Q5VTE6 544 aaKnown RBP22.54■■□□□ 1.2
SPSB3-201ENST00000301717 NEUROD6Q96NK8 337 aa22.54■■□□□ 1.2
SPSB3-201ENST00000301717 XAGE2Q96GT9 111 aa22.53■■□□□ 1.2
SPSB3-201ENST00000301717 WNT10BO00744 389 aa22.52■■□□□ 1.2
SPSB3-201ENST00000301717 CCDC102BQ68D86 513 aa22.52■■□□□ 1.2
SPSB3-201ENST00000301717 KRT26Q7Z3Y9 468 aa22.52■■□□□ 1.2
SPSB3-201ENST00000301717 FKBP1AP62942 108 aaKnown RBP22.51■■□□□ 1.19
SPSB3-201ENST00000301717 ZNF408Q9H9D4 720 aa22.51■■□□□ 1.19
SPSB3-201ENST00000301717 HDAC9Q9UKV0 1011 aa22.51■■□□□ 1.19
SPSB3-201ENST00000301717 TTF2Q9UNY4 1162 aaKnown RBP22.51■■□□□ 1.19
SPSB3-201ENST00000301717 AKAP2Q9Y2D5 859 aa22.51■■□□□ 1.19
SPSB3-201ENST00000301717 NOP58Q9Y2X3 529 aaKnown RBP22.51■■□□□ 1.19
SPSB3-201ENST00000301717 CFAP100Q494V2 611 aa22.5■■□□□ 1.19
SPSB3-201ENST00000301717 CST9Q5W186 159 aa22.5■■□□□ 1.19
SPSB3-201ENST00000301717 CDC37L1Q7L3B6 337 aa22.5■■□□□ 1.19
SPSB3-201ENST00000301717 DNAJC5GQ8N7S2 189 aa22.5■■□□□ 1.19
SPSB3-201ENST00000301717 DCPSQ96C86 337 aaKnown RBP22.5■■□□□ 1.19
SPSB3-201ENST00000301717 APBB1O00213 710 aa22.49■■□□□ 1.19
SPSB3-201ENST00000301717 ZBED3Q96IU2 234 aaPredicted RBP22.49■■□□□ 1.19
SPSB3-201ENST00000301717 ARAP2Q8WZ64 1704 aa22.49■■□□□ 1.19
SPSB3-201ENST00000301717 TMEM88BA6NKF7 163 aa22.48■■□□□ 1.19
SPSB3-201ENST00000301717 RASGRF1Q13972 1273 aa22.48■■□□□ 1.19
SPSB3-201ENST00000301717 DLGAP5Q15398 846 aa22.48■■□□□ 1.19
SPSB3-201ENST00000301717 TNNI3KQ59H18 835 aa22.48■■□□□ 1.19
SPSB3-201ENST00000301717 RPAP2Q8IXW5 612 aaPredicted RBP22.48■■□□□ 1.19
SPSB3-201ENST00000301717 CRBNQ96SW2 442 aa22.48■■□□□ 1.19
SPSB3-201ENST00000301717 DBNDD2Q9BQY9 259 aa22.48■■□□□ 1.19
SPSB3-201ENST00000301717 BCL11AQ9H165 835 aa22.48■■□□□ 1.19
SPSB3-201ENST00000301717 CREBZFQ9NS37 354 aa22.48■■□□□ 1.19
SPSB3-201ENST00000301717 TLR7Q9NYK1 1049 aaKnown RBP22.48■■□□□ 1.19
SPSB3-201ENST00000301717 FPGT-TNNI3KV9GXZ4 949 aa22.48■■□□□ 1.19
SPSB3-201ENST00000301717 CELF2O95319 508 aaKnown RBP22.48■■□□□ 1.19
SPSB3-201ENST00000301717 RBM5P52756 815 aaKnown RBP eCLIP22.48■■□□□ 1.19
SPSB3-201ENST00000301717 PRAMEF18Q5VWM3 479 aa22.48■■□□□ 1.19
SPSB3-201ENST00000301717 PI16Q6UXB8 463 aa22.48■■□□□ 1.19
SPSB3-201ENST00000301717 PRMT6Q96LA8 375 aaPredicted RBP22.48■■□□□ 1.19
SPSB3-201ENST00000301717 MKRN1Q9UHC7 482 aaKnown RBP22.48■■□□□ 1.19
SPSB3-201ENST00000301717 PCNTO95613 3336 aa22.47■■□□□ 1.19
SPSB3-201ENST00000301717 CLRN2A0PK11 232 aa22.47■■□□□ 1.19
SPSB3-201ENST00000301717 SULF1Q8IWU6 871 aa22.47■■□□□ 1.19
SPSB3-201ENST00000301717 GNL3LQ9NVN8 582 aaKnown RBP22.47■■□□□ 1.19
SPSB3-201ENST00000301717 SPDYE2BA6NHP3 402 aa22.46■■□□□ 1.19
SPSB3-201ENST00000301717 SPDYE6P0CI01 402 aa22.46■■□□□ 1.19
SPSB3-201ENST00000301717 GORABQ5T7V8 394 aa22.46■■□□□ 1.19
SPSB3-201ENST00000301717 TBC1D22AQ8WUA7 517 aa22.46■■□□□ 1.19
SPSB3-201ENST00000301717 EAF2Q96CJ1 260 aaPredicted RBP22.46■■□□□ 1.19
SPSB3-201ENST00000301717 CCDC8Q9H0W5 538 aaPredicted RBP22.46■■□□□ 1.19
SPSB3-201ENST00000301717 IL1RAPL2Q9NP60 686 aa22.46■■□□□ 1.19
SPSB3-201ENST00000301717 POLR2AP24928 1970 aaKnown RBP22.45■■□□□ 1.18
SPSB3-201ENST00000301717 PRDX5P30044 214 aa22.45■■□□□ 1.18
SPSB3-201ENST00000301717 CRKP46108 304 aa22.45■■□□□ 1.18
SPSB3-201ENST00000301717 CHMP4BQ9H444 224 aaKnown RBP22.45■■□□□ 1.18
SPSB3-201ENST00000301717 MTMR14Q8NCE2 650 aa22.44■■□□□ 1.18
SPSB3-201ENST00000301717 CDCA5Q96FF9 252 aa22.44■■□□□ 1.18
SPSB3-201ENST00000301717 GPR108Q9NPR9 543 aa22.44■■□□□ 1.18
SPSB3-201ENST00000301717 DBNLQ9UJU6 430 aaKnown RBP22.44■■□□□ 1.18
SPSB3-201ENST00000301717 ABT1Q9ULW3 272 aaKnown RBP22.44■■□□□ 1.18
SPSB3-201ENST00000301717 HMMRO75330 724 aa22.43■■□□□ 1.18
SPSB3-201ENST00000301717 WDR66Q8TBY9 1149 aa22.43■■□□□ 1.18
SPSB3-201ENST00000301717 KLRG1Q96E93 195 aa22.43■■□□□ 1.18
SPSB3-201ENST00000301717 HMG20BQ9P0W2 317 aa22.43■■□□□ 1.18
SPSB3-201ENST00000301717 DENND2AQ9ULE3 1009 aa22.43■■□□□ 1.18
SPSB3-201ENST00000301717 DIXDC1Q155Q3 683 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms