RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 U2AF2P26368 475 aaKnown RBP eCLIP11.86□□□□□ -0.51
FOXN4-201ENST00000299162 MIGA1Q8NAN2 632 aa11.86□□□□□ -0.51
FOXN4-201ENST00000299162 ZBTB9Q96C00 473 aa11.86□□□□□ -0.51
FOXN4-201ENST00000299162 MYL10Q9BUA6 226 aa11.86□□□□□ -0.51
FOXN4-201ENST00000299162 TEX13AQ9BXU3 409 aaPredicted RBP11.86□□□□□ -0.51
FOXN4-201ENST00000299162 ABCF2Q9UG63 623 aa11.86□□□□□ -0.51
FOXN4-201ENST00000299162 TUBGCP6Q96RT7 1819 aa11.86□□□□□ -0.51
FOXN4-201ENST00000299162 UBN2Q6ZU65 1347 aa11.86□□□□□ -0.51
FOXN4-201ENST00000299162 SUSD4Q5VX71 490 aa11.85□□□□□ -0.51
FOXN4-201ENST00000299162 C8orf37Q96NL8 207 aa11.85□□□□□ -0.51
FOXN4-201ENST00000299162 WWC3Q9ULE0 1092 aa11.85□□□□□ -0.51
FOXN4-201ENST00000299162 KLF18A0A0U1RQI7 1052 aa11.85□□□□□ -0.51
FOXN4-201ENST00000299162 GOLGA8BA8MQT2 603 aa11.85□□□□□ -0.51
FOXN4-201ENST00000299162 CPLX1O14810 134 aa11.85□□□□□ -0.51
FOXN4-201ENST00000299162 CRKLP46109 303 aaKnown RBP11.85□□□□□ -0.51
FOXN4-201ENST00000299162 IMMTQ16891 758 aaKnown RBP11.85□□□□□ -0.51
FOXN4-201ENST00000299162 PTF1AQ7RTS3 328 aa11.85□□□□□ -0.51
FOXN4-201ENST00000299162 KCNB2Q92953 911 aa11.85□□□□□ -0.51
FOXN4-201ENST00000299162 PIH1D3Q9NQM4 214 aaKnown RBP11.85□□□□□ -0.51
FOXN4-201ENST00000299162 ZNF213O14771 459 aa11.84□□□□□ -0.51
FOXN4-201ENST00000299162 CDK11BP21127 795 aaKnown RBP11.84□□□□□ -0.51
FOXN4-201ENST00000299162 MTERF4Q7Z6M4 381 aaKnown RBP11.84□□□□□ -0.51
FOXN4-201ENST00000299162 ZKSCAN3Q9BRR0 538 aa11.84□□□□□ -0.51
FOXN4-201ENST00000299162 HELLSQ9NRZ9 838 aa11.84□□□□□ -0.51
FOXN4-201ENST00000299162 PRC1O43663 620 aa11.84□□□□□ -0.51
FOXN4-201ENST00000299162 KIF20AO95235 890 aa11.84□□□□□ -0.51
FOXN4-201ENST00000299162 CCDC102BQ68D86 513 aa11.84□□□□□ -0.51
FOXN4-201ENST00000299162 TRERF1Q96PN7 1200 aa11.84□□□□□ -0.51
FOXN4-201ENST00000299162 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
FOXN4-201ENST00000299162 KIF3AQ9Y496 699 aa11.84□□□□□ -0.51
FOXN4-201ENST00000299162 BCAMP50895 628 aa11.84□□□□□ -0.51
FOXN4-201ENST00000299162 USPL1Q5W0Q7 1092 aa11.84□□□□□ -0.51
FOXN4-201ENST00000299162 MICU3Q86XE3 530 aa11.84□□□□□ -0.51
FOXN4-201ENST00000299162 DRC7Q8IY82 874 aa11.84□□□□□ -0.51
FOXN4-201ENST00000299162 PDCL2Q8N4E4 241 aa11.84□□□□□ -0.51
FOXN4-201ENST00000299162 NKX2-3Q8TAU0 364 aa11.84□□□□□ -0.51
FOXN4-201ENST00000299162 TNMDQ9H2S6 317 aa11.84□□□□□ -0.51
FOXN4-201ENST00000299162 ZNF532Q9HCE3 1301 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 NOLC1Q14978 699 aaKnown RBP eCLIP11.83□□□□□ -0.52
FOXN4-201ENST00000299162 NFXL1Q6ZNB6 911 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 IL17RAQ96F46 866 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 NUP62CLQ9H1M0 184 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 RIPOR2Q9Y4F9 1068 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 SH3TC1Q8TE82 1336 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 LOC102724428A0A0B4J2F2 783 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 B4E1Z4 1266 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 NR1I2O75469 434 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 ADCY5O95622 1261 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 SIK1P57059 783 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 ITPK1Q13572 414 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 MAGEB6Q8N7X4 407 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 MARCH10Q8NA82 808 aaPredicted RBP11.83□□□□□ -0.52
FOXN4-201ENST00000299162 LEO1Q8WVC0 666 aaPredicted RBP11.83□□□□□ -0.52
FOXN4-201ENST00000299162 ZNF592Q92610 1267 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 AIDAQ96BJ3 306 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 AIFM3Q96NN9 605 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 ARFGEF2Q9Y6D5 1785 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 KCPQ6ZWJ8 1503 aa11.83□□□□□ -0.52
FOXN4-201ENST00000299162 ME1P48163 572 aa11.82□□□□□ -0.52
FOXN4-201ENST00000299162 TRDNQ13061 729 aa11.82□□□□□ -0.52
FOXN4-201ENST00000299162 CHAF1AQ13111 956 aaPredicted RBP11.82□□□□□ -0.52
FOXN4-201ENST00000299162 LUZP1Q86V48 1076 aa11.82□□□□□ -0.52
FOXN4-201ENST00000299162 N4BP2Q86UW6 1770 aaPredicted RBP11.82□□□□□ -0.52
FOXN4-201ENST00000299162 PDE8AO60658 829 aa11.82□□□□□ -0.52
FOXN4-201ENST00000299162 CIAO1O76071 339 aa11.82□□□□□ -0.52
FOXN4-201ENST00000299162 PDE8BO95263 885 aa11.82□□□□□ -0.52
FOXN4-201ENST00000299162 CTDNEP1O95476 244 aa11.82□□□□□ -0.52
FOXN4-201ENST00000299162 PDIA3P30101 505 aaKnown RBP11.82□□□□□ -0.52
FOXN4-201ENST00000299162 IRX3P78415 501 aaPredicted RBP11.82□□□□□ -0.52
FOXN4-201ENST00000299162 CTDSPL2Q05D32 466 aa11.82□□□□□ -0.52
FOXN4-201ENST00000299162 NSUN7Q8NE18 718 aaKnown RBP11.82□□□□□ -0.52
FOXN4-201ENST00000299162 ARMT1Q9H993 441 aa11.82□□□□□ -0.52
FOXN4-201ENST00000299162 MRC1P22897 1456 aa11.82□□□□□ -0.52
FOXN4-201ENST00000299162 EP400Q96L91 3159 aa11.82□□□□□ -0.52
FOXN4-201ENST00000299162 PRKAB2O43741 272 aa11.82□□□□□ -0.52
FOXN4-201ENST00000299162 NGLY1Q96IV0 654 aa11.82□□□□□ -0.52
FOXN4-201ENST00000299162 DSCC1Q9BVC3 393 aa11.82□□□□□ -0.52
FOXN4-201ENST00000299162 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.82□□□□□ -0.52
FOXN4-201ENST00000299162 SENP2Q9HC62 589 aa11.82□□□□□ -0.52
FOXN4-201ENST00000299162 CMTR1Q8N1G2 835 aaKnown RBP11.81□□□□□ -0.52
FOXN4-201ENST00000299162 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
FOXN4-201ENST00000299162 APPBP2Q92624 585 aa11.81□□□□□ -0.52
FOXN4-201ENST00000299162 CCDC87Q9NVE4 849 aa11.81□□□□□ -0.52
FOXN4-201ENST00000299162 UBE2Q2LH0YL09 131 aa11.81□□□□□ -0.52
FOXN4-201ENST00000299162 ATP2B1P20020 1258 aa11.81□□□□□ -0.52
FOXN4-201ENST00000299162 SF3A1Q15459 793 aaKnown RBP11.81□□□□□ -0.52
FOXN4-201ENST00000299162 PHKBQ93100 1093 aa11.81□□□□□ -0.52
FOXN4-201ENST00000299162 PDLIM2Q96JY6 352 aa11.81□□□□□ -0.52
FOXN4-201ENST00000299162 LRP2BPQ9P2M1 347 aa11.81□□□□□ -0.52
FOXN4-201ENST00000299162 MBD4O95243 580 aa11.81□□□□□ -0.52
FOXN4-201ENST00000299162 CSF1RP07333 972 aa11.81□□□□□ -0.52
FOXN4-201ENST00000299162 ADD1P35611 737 aaKnown RBP11.81□□□□□ -0.52
FOXN4-201ENST00000299162 PGBD1Q96JS3 809 aa11.81□□□□□ -0.52
FOXN4-201ENST00000299162 UTP14AQ9BVJ6 771 aaKnown RBP11.81□□□□□ -0.52
FOXN4-201ENST00000299162 GPR108Q9NPR9 543 aa11.81□□□□□ -0.52
FOXN4-201ENST00000299162 ERICH4A6NGS2 130 aa11.8□□□□□ -0.52
FOXN4-201ENST00000299162 MINDY4BA8MYZ0 360 aa11.8□□□□□ -0.52
FOXN4-201ENST00000299162 LETM1O95202 739 aaPredicted RBP11.8□□□□□ -0.52
FOXN4-201ENST00000299162 IRX5P78411 483 aaPredicted RBP11.8□□□□□ -0.52
FOXN4-201ENST00000299162 GNL2Q13823 731 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms