RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 TNPO1Q92973 898 aaKnown RBP17.02■□□□□ 0.31
C9orf3-202ENST00000297979 IDH1O75874 414 aaKnown RBP17.01■□□□□ 0.31
C9orf3-202ENST00000297979 CYP21A2P08686 494 aa17.01■□□□□ 0.31
C9orf3-202ENST00000297979 NUCB2P80303 420 aa17.01■□□□□ 0.31
C9orf3-202ENST00000297979 SLC9C2Q5TAH2 1124 aa17.01■□□□□ 0.31
C9orf3-202ENST00000297979 APBA3O96018 575 aa17.01■□□□□ 0.31
C9orf3-202ENST00000297979 TM4SF1P30408 202 aa17.01■□□□□ 0.31
C9orf3-202ENST00000297979 UBE3CQ15386 1083 aa17■□□□□ 0.31
C9orf3-202ENST00000297979 PRR5LQ6MZQ0 368 aa17■□□□□ 0.31
C9orf3-202ENST00000297979 PUS7LQ9H0K6 701 aaKnown RBP17■□□□□ 0.31
C9orf3-202ENST00000297979 ZNF804BA4D1E1 1349 aa17■□□□□ 0.31
C9orf3-202ENST00000297979 RPS6KB1P23443 525 aa17■□□□□ 0.31
C9orf3-202ENST00000297979 MCM4P33991 863 aa16.99■□□□□ 0.31
C9orf3-202ENST00000297979 ANKRD2Q9GZV1 360 aa16.99■□□□□ 0.31
C9orf3-202ENST00000297979 PDE6AP16499 860 aa16.99■□□□□ 0.31
C9orf3-202ENST00000297979 SERPINB2P05120 415 aa16.98■□□□□ 0.31
C9orf3-202ENST00000297979 ST5P78524 1137 aa16.98■□□□□ 0.31
C9orf3-202ENST00000297979 ZSCAN31Q96LW9 406 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-202ENST00000297979 NEK1Q96PY6 1258 aa16.98■□□□□ 0.31
C9orf3-202ENST00000297979 GNL3LQ9NVN8 582 aaKnown RBP16.98■□□□□ 0.31
C9orf3-202ENST00000297979 TNS1Q9HBL0 1735 aaKnown RBP16.98■□□□□ 0.31
C9orf3-202ENST00000297979 GPAA1O43292 621 aa16.98■□□□□ 0.31
C9orf3-202ENST00000297979 MAP3K12Q12852 859 aa16.98■□□□□ 0.31
C9orf3-202ENST00000297979 CAVIN4Q5BKX8 364 aa16.98■□□□□ 0.31
C9orf3-202ENST00000297979 GBP4Q96PP9 640 aa16.98■□□□□ 0.31
C9orf3-202ENST00000297979 ALDH8A1Q9H2A2 487 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-202ENST00000297979 TFCP2L1Q9NZI6 479 aa16.98■□□□□ 0.31
C9orf3-202ENST00000297979 WWC3Q9ULE0 1092 aa16.98■□□□□ 0.31
C9orf3-202ENST00000297979 ZNF532Q9HCE3 1301 aa16.98■□□□□ 0.31
C9orf3-202ENST00000297979 ANKRD1Q15327 319 aa16.97■□□□□ 0.31
C9orf3-202ENST00000297979 ZNF827Q17R98 1081 aa16.97■□□□□ 0.31
C9orf3-202ENST00000297979 LARP6Q9BRS8 491 aaKnown RBP16.97■□□□□ 0.31
C9orf3-202ENST00000297979 SH2B1Q9NRF2 756 aaPredicted RBP16.97■□□□□ 0.31
C9orf3-202ENST00000297979 CTNNA3Q9UI47 895 aa16.97■□□□□ 0.31
C9orf3-202ENST00000297979 TCRBV5S4A2TA0A5A2 114 aa16.97■□□□□ 0.31
C9orf3-202ENST00000297979 GYG1P46976 350 aa16.97■□□□□ 0.31
C9orf3-202ENST00000297979 GRAPQ13588 217 aa16.97■□□□□ 0.31
C9orf3-202ENST00000297979 COL9A3Q14050 684 aaPredicted RBP16.97■□□□□ 0.31
C9orf3-202ENST00000297979 GRAPLQ8TC17 118 aaPredicted RBP16.97■□□□□ 0.31
C9orf3-202ENST00000297979 ZFP91Q96JP5 570 aaPredicted RBP16.97■□□□□ 0.31
C9orf3-202ENST00000297979 FOXP2O15409 715 aa16.97■□□□□ 0.31
C9orf3-202ENST00000297979 AKT1S1Q96B36 256 aa16.97■□□□□ 0.31
C9orf3-202ENST00000297979 WTIPA6NIX2 430 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-202ENST00000297979 RGPD3A6NKT7 1758 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-202ENST00000297979 RGPD4Q7Z3J3 1758 aa16.96■□□□□ 0.31
C9orf3-202ENST00000297979 LAMA4Q16363 1823 aa16.96■□□□□ 0.31
C9orf3-202ENST00000297979 LARGE1O95461 756 aa16.96■□□□□ 0.3
C9orf3-202ENST00000297979 HMGB1P09429 215 aaKnown RBP16.96■□□□□ 0.3
C9orf3-202ENST00000297979 DDR1Q08345 913 aa16.96■□□□□ 0.3
C9orf3-202ENST00000297979 VPS37DQ86XT2 251 aa16.96■□□□□ 0.3
C9orf3-202ENST00000297979 DDX11L8A8MPP1 907 aa16.95■□□□□ 0.3
C9orf3-202ENST00000297979 PKP1Q13835 747 aa16.95■□□□□ 0.3
C9orf3-202ENST00000297979 STOX1Q6ZVD7 989 aa16.95■□□□□ 0.3
C9orf3-202ENST00000297979 MAGEB6Q8N7X4 407 aa16.95■□□□□ 0.3
C9orf3-202ENST00000297979 RPGRQ92834 1020 aaKnown RBP16.95■□□□□ 0.3
C9orf3-202ENST00000297979 TCEANC2Q96MN5 208 aa16.95■□□□□ 0.3
C9orf3-202ENST00000297979 POLRMTO00411 1230 aaKnown RBP16.95■□□□□ 0.3
C9orf3-202ENST00000297979 CRY2Q49AN0 593 aa16.95■□□□□ 0.3
C9orf3-202ENST00000297979 FAM84BQ96KN1 310 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-202ENST00000297979 RGS17Q9UGC6 210 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-202ENST00000297979 IQSEC3Q9UPP2 1182 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-202ENST00000297979 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-202ENST00000297979 COL1A1P02452 1464 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-202ENST00000297979 TOB2Q14106 344 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-202ENST00000297979 IMMTQ16891 758 aaKnown RBP16.94■□□□□ 0.3
C9orf3-202ENST00000297979 TTLL5Q6EMB2 1281 aa16.94■□□□□ 0.3
C9orf3-202ENST00000297979 CLEC17AQ6ZS10 378 aa16.94■□□□□ 0.3
C9orf3-202ENST00000297979 TPCN1Q9ULQ1 816 aa16.94■□□□□ 0.3
C9orf3-202ENST00000297979 A0A0G2JLW4 131 aa16.93■□□□□ 0.3
C9orf3-202ENST00000297979 FGAP02671 866 aa16.93■□□□□ 0.3
C9orf3-202ENST00000297979 ME3Q16798 604 aa16.93■□□□□ 0.3
C9orf3-202ENST00000297979 FBXO33Q7Z6M2 555 aa16.93■□□□□ 0.3
C9orf3-202ENST00000297979 AIDAQ96BJ3 306 aa16.93■□□□□ 0.3
C9orf3-202ENST00000297979 DENND2AQ9ULE3 1009 aa16.93■□□□□ 0.3
C9orf3-202ENST00000297979 E7EWF7 191 aa16.93■□□□□ 0.3
C9orf3-202ENST00000297979 SEMA3EO15041 775 aa16.93■□□□□ 0.3
C9orf3-202ENST00000297979 KLRK1P26718 216 aa16.93■□□□□ 0.3
C9orf3-202ENST00000297979 LRP2BPQ9P2M1 347 aa16.93■□□□□ 0.3
C9orf3-202ENST00000297979 POTEAQ6S8J7 498 aa16.92■□□□□ 0.3
C9orf3-202ENST00000297979 COL23A1Q86Y22 540 aaPredicted RBP16.92■□□□□ 0.3
C9orf3-202ENST00000297979 FLAD1Q8NFF5 587 aa16.92■□□□□ 0.3
C9orf3-202ENST00000297979 MYH13Q9UKX3 1938 aa16.92■□□□□ 0.3
C9orf3-202ENST00000297979 DHX32Q7L7V1 743 aaKnown RBP16.92■□□□□ 0.3
C9orf3-202ENST00000297979 CCDC83Q8IWF9 413 aa16.92■□□□□ 0.3
C9orf3-202ENST00000297979 ZDHHC9Q9Y397 364 aa16.92■□□□□ 0.3
C9orf3-202ENST00000297979 NLGN1Q8N2Q7 840 aa16.92■□□□□ 0.3
C9orf3-202ENST00000297979 RBM17Q96I25 401 aaKnown RBP16.92■□□□□ 0.3
C9orf3-202ENST00000297979 STRBPQ96SI9 672 aaKnown RBP16.92■□□□□ 0.3
C9orf3-202ENST00000297979 HIBADHP31937 336 aaKnown RBP16.91■□□□□ 0.3
C9orf3-202ENST00000297979 SMC3Q9UQE7 1217 aa16.91■□□□□ 0.3
C9orf3-202ENST00000297979 PDS5AQ29RF7 1337 aaKnown RBP16.91■□□□□ 0.3
C9orf3-202ENST00000297979 Q6ZUG5 572 aa16.91■□□□□ 0.3
C9orf3-202ENST00000297979 ANKIB1Q9P2G1 1089 aa16.91■□□□□ 0.3
C9orf3-202ENST00000297979 MBD4O95243 580 aa16.9■□□□□ 0.3
C9orf3-202ENST00000297979 BAG4O95429 457 aaKnown RBP16.9■□□□□ 0.3
C9orf3-202ENST00000297979 BRD1O95696 1058 aa16.9■□□□□ 0.3
C9orf3-202ENST00000297979 HAND2P61296 217 aa16.9■□□□□ 0.3
C9orf3-202ENST00000297979 PLCB2Q00722 1185 aa16.9■□□□□ 0.3
C9orf3-202ENST00000297979 ST3GAL1Q11201 340 aa16.9■□□□□ 0.3
C9orf3-202ENST00000297979 ABCF2Q9UG63 623 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms