RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 CSF1RP07333 972 aa13.45□□□□□ -0.26
RFC4-201ENST00000296273 PRKG1Q13976 671 aa13.45□□□□□ -0.26
RFC4-201ENST00000296273 GCKRQ14397 625 aa13.45□□□□□ -0.26
RFC4-201ENST00000296273 DLGAP5Q15398 846 aa13.45□□□□□ -0.26
RFC4-201ENST00000296273 GCC1Q96CN9 775 aa13.45□□□□□ -0.26
RFC4-201ENST00000296273 SLC10A4Q96EP9 437 aa13.45□□□□□ -0.26
RFC4-201ENST00000296273 DEFB129Q9H1M3 183 aa13.45□□□□□ -0.26
RFC4-201ENST00000296273 CD209Q9NNX6 404 aa13.45□□□□□ -0.26
RFC4-201ENST00000296273 SUPT16HQ9Y5B9 1047 aaKnown RBP13.45□□□□□ -0.26
RFC4-201ENST00000296273 SLC4A2P04920 1241 aa13.44□□□□□ -0.26
RFC4-201ENST00000296273 CHRNDQ07001 517 aa13.44□□□□□ -0.26
RFC4-201ENST00000296273 CCDC27Q2M243 656 aa13.44□□□□□ -0.26
RFC4-201ENST00000296273 TWISTNBQ3B726 338 aaPredicted RBP13.44□□□□□ -0.26
RFC4-201ENST00000296273 INTS3Q68E01 1043 aaKnown RBP13.44□□□□□ -0.26
RFC4-201ENST00000296273 C15orf52Q6ZUT6 534 aaKnown RBP13.44□□□□□ -0.26
RFC4-201ENST00000296273 ANKRD18BA2A2Z9 1011 aa13.43□□□□□ -0.26
RFC4-201ENST00000296273 KLRK1P26718 216 aa13.43□□□□□ -0.26
RFC4-201ENST00000296273 CASP7P55210 303 aa13.43□□□□□ -0.26
RFC4-201ENST00000296273 FKBP1AP62942 108 aaKnown RBP13.43□□□□□ -0.26
RFC4-201ENST00000296273 SUPT20HL1Q3ZLR7 823 aa13.43□□□□□ -0.26
RFC4-201ENST00000296273 IFNL1Q8IU54 200 aa13.43□□□□□ -0.26
RFC4-201ENST00000296273 LINS1Q8NG48 757 aa13.43□□□□□ -0.26
RFC4-201ENST00000296273 TSR2Q969E8 191 aaKnown RBP13.43□□□□□ -0.26
RFC4-201ENST00000296273 PDE4DIPQ5VU43 2346 aa13.42□□□□□ -0.26
RFC4-201ENST00000296273 FLIIQ13045 1269 aa13.42□□□□□ -0.26
RFC4-201ENST00000296273 OTUD7BQ6GQQ9 843 aa13.42□□□□□ -0.26
RFC4-201ENST00000296273 G2E3Q7L622 706 aa13.42□□□□□ -0.26
RFC4-201ENST00000296273 ZNF804AQ7Z570 1209 aa13.42□□□□□ -0.26
RFC4-201ENST00000296273 DNAAF4Q8WXU2 420 aa13.42□□□□□ -0.26
RFC4-201ENST00000296273 R3HDMLQ9H3Y0 253 aa13.42□□□□□ -0.26
RFC4-201ENST00000296273 IL1R1P14778 569 aa13.41□□□□□ -0.26
RFC4-201ENST00000296273 FKBP5Q13451 457 aaPredicted RBP13.41□□□□□ -0.26
RFC4-201ENST00000296273 ERO1AQ96HE7 468 aa13.41□□□□□ -0.26
RFC4-201ENST00000296273 WNK4Q96J92 1243 aa13.41□□□□□ -0.26
RFC4-201ENST00000296273 TRIM17Q9Y577 477 aa13.41□□□□□ -0.26
RFC4-201ENST00000296273 IL16Q14005 1332 aa13.4□□□□□ -0.26
RFC4-201ENST00000296273 IRS2Q9Y4H2 1338 aa13.4□□□□□ -0.26
RFC4-201ENST00000296273 LAMB1P07942 1786 aa13.4□□□□□ -0.26
RFC4-201ENST00000296273 SPDYE2BA6NHP3 402 aa13.4□□□□□ -0.26
RFC4-201ENST00000296273 SPDYE6P0CI01 402 aa13.4□□□□□ -0.26
RFC4-201ENST00000296273 IREB2P48200 963 aaKnown RBP13.4□□□□□ -0.26
RFC4-201ENST00000296273 IFIT5Q13325 482 aaKnown RBP13.4□□□□□ -0.26
RFC4-201ENST00000296273 CFAP100Q494V2 611 aa13.4□□□□□ -0.26
RFC4-201ENST00000296273 OTOP1Q7RTM1 612 aa13.4□□□□□ -0.26
RFC4-201ENST00000296273 WWC1Q8IX03 1113 aa13.4□□□□□ -0.26
RFC4-201ENST00000296273 CERS5Q8N5B7 392 aa13.4□□□□□ -0.26
RFC4-201ENST00000296273 ECM29Q5VYK3 1845 aa13.4□□□□□ -0.26
RFC4-201ENST00000296273 TNFAIP1Q13829 316 aa13.39□□□□□ -0.27
RFC4-201ENST00000296273 ANKRD13AQ8IZ07 590 aa13.39□□□□□ -0.27
RFC4-201ENST00000296273 FZD1Q9UP38 647 aa13.39□□□□□ -0.27
RFC4-201ENST00000296273 SSC5DA1L4H1 1573 aa13.38□□□□□ -0.27
RFC4-201ENST00000296273 IGF2BP3O00425 579 aaKnown RBP eCLIP13.38□□□□□ -0.27
RFC4-201ENST00000296273 TAF5LO75529 589 aa13.38□□□□□ -0.27
RFC4-201ENST00000296273 PRMT6Q96LA8 375 aaPredicted RBP13.38□□□□□ -0.27
RFC4-201ENST00000296273 VEZTQ9HBM0 779 aa13.38□□□□□ -0.27
RFC4-201ENST00000296273 CLRN2A0PK11 232 aa13.37□□□□□ -0.27
RFC4-201ENST00000296273 TESPA1A2RU30 521 aaPredicted RBP13.37□□□□□ -0.27
RFC4-201ENST00000296273 F8W031 263 aaPredicted RBP13.37□□□□□ -0.27
RFC4-201ENST00000296273 RBM5P52756 815 aaKnown RBP eCLIP13.37□□□□□ -0.27
RFC4-201ENST00000296273 NBPF12Q5TAG4 269 aaPredicted RBP13.37□□□□□ -0.27
RFC4-201ENST00000296273 CLMNQ96JQ2 1002 aa13.37□□□□□ -0.27
RFC4-201ENST00000296273 PTPN22Q9Y2R2 807 aa13.37□□□□□ -0.27
RFC4-201ENST00000296273 CHMP3Q9Y3E7 222 aa13.37□□□□□ -0.27
RFC4-201ENST00000296273 SNAP23O00161 211 aa13.36□□□□□ -0.27
RFC4-201ENST00000296273 USP2O75604 605 aaPredicted RBP13.36□□□□□ -0.27
RFC4-201ENST00000296273 FOXO4P98177 505 aa13.36□□□□□ -0.27
RFC4-201ENST00000296273 SP3Q02447 781 aa13.36□□□□□ -0.27
RFC4-201ENST00000296273 RASA3Q14644 834 aa13.36□□□□□ -0.27
RFC4-201ENST00000296273 ARHGEF6Q15052 776 aa13.36□□□□□ -0.27
RFC4-201ENST00000296273 CCDC57Q2TAC2 916 aa13.36□□□□□ -0.27
RFC4-201ENST00000296273 HELBQ8NG08 1087 aaPredicted RBP13.36□□□□□ -0.27
RFC4-201ENST00000296273 EFCC1Q9HA90 598 aa13.36□□□□□ -0.27
RFC4-201ENST00000296273 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.36□□□□□ -0.27
RFC4-201ENST00000296273 CRHR2Q13324 411 aa13.35□□□□□ -0.27
RFC4-201ENST00000296273 TAF7LQ5H9L4 462 aa13.35□□□□□ -0.27
RFC4-201ENST00000296273 LDHAL6AQ6ZMR3 332 aa13.35□□□□□ -0.27
RFC4-201ENST00000296273 ARMC5Q96C12 935 aa13.35□□□□□ -0.27
RFC4-201ENST00000296273 SERPINA10Q9UK55 444 aa13.35□□□□□ -0.27
RFC4-201ENST00000296273 PCDHAC2Q9Y5I4 1007 aa13.35□□□□□ -0.27
RFC4-201ENST00000296273 FAM205AQ6ZU69 1335 aa13.35□□□□□ -0.27
RFC4-201ENST00000296273 POTEFA5A3E0 1075 aa13.34□□□□□ -0.27
RFC4-201ENST00000296273 VAMP4O75379 141 aa13.34□□□□□ -0.27
RFC4-201ENST00000296273 UBE4AQ14139 1066 aa13.34□□□□□ -0.27
RFC4-201ENST00000296273 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
RFC4-201ENST00000296273 BEND3Q5T5X7 828 aa13.34□□□□□ -0.27
RFC4-201ENST00000296273 LMBR1LQ6UX01 489 aa13.34□□□□□ -0.27
RFC4-201ENST00000296273 CD99L2Q8TCZ2 262 aa13.34□□□□□ -0.27
RFC4-201ENST00000296273 CNNM1Q9NRU3 951 aa13.34□□□□□ -0.27
RFC4-201ENST00000296273 CACNA1FO60840 1977 aa13.34□□□□□ -0.27
RFC4-201ENST00000296273 A0A1B0GUL6 1792 aa13.34□□□□□ -0.27
RFC4-201ENST00000296273 RBBP6Q7Z6E9 1792 aaKnown RBP13.34□□□□□ -0.27
RFC4-201ENST00000296273 FANCIQ9NVI1 1328 aa13.34□□□□□ -0.27
RFC4-201ENST00000296273 GJA5P36382 358 aa13.33□□□□□ -0.27
RFC4-201ENST00000296273 TNNI2P48788 182 aa13.33□□□□□ -0.27
RFC4-201ENST00000296273 MFSD14BQ5SR56 506 aa13.33□□□□□ -0.27
RFC4-201ENST00000296273 TDRD7Q8NHU6 1098 aaKnown RBP13.33□□□□□ -0.27
RFC4-201ENST00000296273 OPTNQ96CV9 577 aa13.33□□□□□ -0.27
RFC4-201ENST00000296273 PTPN18Q99952 460 aa13.33□□□□□ -0.27
RFC4-201ENST00000296273 GRM8O00222 908 aa13.32□□□□□ -0.28
RFC4-201ENST00000296273 PLIN1O60240 522 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms