RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 CCDC9Q9Y3X0 531 aaKnown RBP11.02□□□□□ -0.64
CLRN1-201ENST00000295911 RIPOR2Q9Y4F9 1068 aa11.02□□□□□ -0.64
CLRN1-201ENST00000295911 BCORQ6W2J9 1755 aa11.02□□□□□ -0.65
CLRN1-201ENST00000295911 LOC102724428A0A0B4J2F2 783 aa11.01□□□□□ -0.65
CLRN1-201ENST00000295911 PRPF40AO75400 957 aaKnown RBP11.01□□□□□ -0.65
CLRN1-201ENST00000295911 SIK1P57059 783 aa11.01□□□□□ -0.65
CLRN1-201ENST00000295911 ATP2B3Q16720 1220 aa11.01□□□□□ -0.65
CLRN1-201ENST00000295911 METTL24Q5JXM2 366 aa11.01□□□□□ -0.65
CLRN1-201ENST00000295911 INTS5Q6P9B9 1019 aaKnown RBP11.01□□□□□ -0.65
CLRN1-201ENST00000295911 ZNF512BQ96KM6 892 aaPredicted RBP11.01□□□□□ -0.65
CLRN1-201ENST00000295911 GPHNQ9NQX3 736 aaPredicted RBP11.01□□□□□ -0.65
CLRN1-201ENST00000295911 CNNM1Q9NRU3 951 aa11.01□□□□□ -0.65
CLRN1-201ENST00000295911 TBC1D2BQ9UPU7 963 aa11.01□□□□□ -0.65
CLRN1-201ENST00000295911 DDX60Q8IY21 1712 aaKnown RBP11.01□□□□□ -0.65
CLRN1-201ENST00000295911 ZSCAN22P10073 491 aaPredicted RBP11.01□□□□□ -0.65
CLRN1-201ENST00000295911 CPA1P15085 419 aa11.01□□□□□ -0.65
CLRN1-201ENST00000295911 NCLP19338 710 aaKnown RBP11.01□□□□□ -0.65
CLRN1-201ENST00000295911 CRKLP46109 303 aaKnown RBP11.01□□□□□ -0.65
CLRN1-201ENST00000295911 FOXK1P85037 733 aa11.01□□□□□ -0.65
CLRN1-201ENST00000295911 ZSCAN25Q6NSZ9 544 aa11.01□□□□□ -0.65
CLRN1-201ENST00000295911 CHMP4CQ96CF2 233 aa11.01□□□□□ -0.65
CLRN1-201ENST00000295911 NEK1Q96PY6 1258 aa11.01□□□□□ -0.65
CLRN1-201ENST00000295911 GREM2Q9H772 168 aa11.01□□□□□ -0.65
CLRN1-201ENST00000295911 RYDENQ9NUL5 291 aaKnown RBP11.01□□□□□ -0.65
CLRN1-201ENST00000295911 STX6O43752 255 aa11□□□□□ -0.65
CLRN1-201ENST00000295911 PDCP20941 246 aa11□□□□□ -0.65
CLRN1-201ENST00000295911 PIP4K2BP78356 416 aa11□□□□□ -0.65
CLRN1-201ENST00000295911 FKBP4Q02790 459 aaKnown RBP eCLIP11□□□□□ -0.65
CLRN1-201ENST00000295911 DSG2Q14126 1118 aa11□□□□□ -0.65
CLRN1-201ENST00000295911 TTF1Q15361 905 aaPredicted RBP11□□□□□ -0.65
CLRN1-201ENST00000295911 CSPP1Q1MSJ5 1256 aa11□□□□□ -0.65
CLRN1-201ENST00000295911 PLPP6Q8IY26 295 aa11□□□□□ -0.65
CLRN1-201ENST00000295911 ACSBG1Q96GR2 724 aa11□□□□□ -0.65
CLRN1-201ENST00000295911 UTP14AQ9BVJ6 771 aaKnown RBP11□□□□□ -0.65
CLRN1-201ENST00000295911 DDX24Q9GZR7 859 aaKnown RBP eCLIP11□□□□□ -0.65
CLRN1-201ENST00000295911 GRPEL1Q9HAV7 217 aa11□□□□□ -0.65
CLRN1-201ENST00000295911 CTNNA3Q9UI47 895 aa11□□□□□ -0.65
CLRN1-201ENST00000295911 ZNF652Q9Y2D9 606 aa11□□□□□ -0.65
CLRN1-201ENST00000295911 NDUFB9Q9Y6M9 179 aa11□□□□□ -0.65
CLRN1-201ENST00000295911 MROH5Q6ZUA9 1318 aa10.99□□□□□ -0.65
CLRN1-201ENST00000295911 RIC1Q4ADV7 1423 aa10.99□□□□□ -0.65
CLRN1-201ENST00000295911 A0A0G2JS52 829 aa10.99□□□□□ -0.65
CLRN1-201ENST00000295911 PDE8BO95263 885 aa10.99□□□□□ -0.65
CLRN1-201ENST00000295911 UQCRFS1P1P0C7P4 283 aa10.99□□□□□ -0.65
CLRN1-201ENST00000295911 XRCC6P12956 609 aaKnown RBP eCLIP10.99□□□□□ -0.65
CLRN1-201ENST00000295911 SYT1P21579 422 aa10.99□□□□□ -0.65
CLRN1-201ENST00000295911 GJB2P29033 226 aa10.99□□□□□ -0.65
CLRN1-201ENST00000295911 ZNF445P59923 1031 aa10.99□□□□□ -0.65
CLRN1-201ENST00000295911 VPS72Q15906 364 aa10.99□□□□□ -0.65
CLRN1-201ENST00000295911 ME3Q16798 604 aa10.99□□□□□ -0.65
CLRN1-201ENST00000295911 CCDC83Q8IWF9 413 aa10.99□□□□□ -0.65
CLRN1-201ENST00000295911 SEC62Q99442 399 aaKnown RBP10.99□□□□□ -0.65
CLRN1-201ENST00000295911 TPCN1Q9ULQ1 816 aa10.99□□□□□ -0.65
CLRN1-201ENST00000295911 LRP5O75197 1615 aa10.99□□□□□ -0.65
CLRN1-201ENST00000295911 UBN2Q6ZU65 1347 aa10.99□□□□□ -0.65
CLRN1-201ENST00000295911 RTL9Q8NET4 1388 aa10.98□□□□□ -0.65
CLRN1-201ENST00000295911 CASZ1Q86V15 1759 aa10.98□□□□□ -0.65
CLRN1-201ENST00000295911 MYO5AQ9Y4I1 1855 aaKnown RBP10.98□□□□□ -0.65
CLRN1-201ENST00000295911 CAMTA2O94983 1202 aa10.98□□□□□ -0.65
CLRN1-201ENST00000295911 ADORA1P30542 326 aa10.98□□□□□ -0.65
CLRN1-201ENST00000295911 TPRNQ4KMQ1 711 aa10.98□□□□□ -0.65
CLRN1-201ENST00000295911 FOXD4L5Q5VV16 416 aaPredicted RBP10.98□□□□□ -0.65
CLRN1-201ENST00000295911 CLEC4GQ6UXB4 293 aa10.98□□□□□ -0.65
CLRN1-201ENST00000295911 CCDC129Q6ZRS4 1044 aa10.98□□□□□ -0.65
CLRN1-201ENST00000295911 SYNE4Q8N205 404 aa10.98□□□□□ -0.65
CLRN1-201ENST00000295911 TMEM87AQ8NBN3 555 aa10.98□□□□□ -0.65
CLRN1-201ENST00000295911 FOXD4L4Q8WXT5 416 aaPredicted RBP10.98□□□□□ -0.65
CLRN1-201ENST00000295911 SYAP1Q96A49 352 aaPredicted RBP10.98□□□□□ -0.65
CLRN1-201ENST00000295911 CCDC85AQ96PX6 553 aaPredicted RBP10.98□□□□□ -0.65
CLRN1-201ENST00000295911 LHX6Q9UPM6 363 aa10.98□□□□□ -0.65
CLRN1-201ENST00000295911 DOCK2Q92608 1830 aa10.97□□□□□ -0.65
CLRN1-201ENST00000295911 LARGE1O95461 756 aa10.97□□□□□ -0.65
CLRN1-201ENST00000295911 F13A1P00488 732 aa10.97□□□□□ -0.65
CLRN1-201ENST00000295911 CYP21A2P08686 494 aa10.97□□□□□ -0.65
CLRN1-201ENST00000295911 HSPD1P10809 573 aaKnown RBP10.97□□□□□ -0.65
CLRN1-201ENST00000295911 ITPK1Q13572 414 aa10.97□□□□□ -0.65
CLRN1-201ENST00000295911 TOB2Q14106 344 aaPredicted RBP10.97□□□□□ -0.65
CLRN1-201ENST00000295911 PUM3Q15397 648 aaKnown RBP10.97□□□□□ -0.65
CLRN1-201ENST00000295911 CCDC152Q4G0S7 254 aa10.97□□□□□ -0.65
CLRN1-201ENST00000295911 SUSD4Q5VX71 490 aa10.97□□□□□ -0.65
CLRN1-201ENST00000295911 CAVIN1Q6NZI2 390 aaKnown RBP10.97□□□□□ -0.65
CLRN1-201ENST00000295911 DHX32Q7L7V1 743 aaKnown RBP10.97□□□□□ -0.65
CLRN1-201ENST00000295911 VGLL2Q8N8G2 317 aa10.97□□□□□ -0.65
CLRN1-201ENST00000295911 LPIN2Q92539 896 aa10.97□□□□□ -0.65
CLRN1-201ENST00000295911 APPBP2Q92624 585 aa10.97□□□□□ -0.65
CLRN1-201ENST00000295911 NGLY1Q96IV0 654 aa10.97□□□□□ -0.65
CLRN1-201ENST00000295911 LARP6Q9BRS8 491 aaKnown RBP10.97□□□□□ -0.65
CLRN1-201ENST00000295911 MAST3O60307 1309 aa10.97□□□□□ -0.65
CLRN1-201ENST00000295911 SLC5A1P13866 664 aa10.96□□□□□ -0.65
CLRN1-201ENST00000295911 ZSCAN23Q3MJ62 389 aa10.96□□□□□ -0.65
CLRN1-201ENST00000295911 GPT2Q8TD30 523 aa10.96□□□□□ -0.65
CLRN1-201ENST00000295911 MPHOSPH8Q99549 860 aa10.96□□□□□ -0.65
CLRN1-201ENST00000295911 BRPF3Q9ULD4 1205 aa10.96□□□□□ -0.65
CLRN1-201ENST00000295911 BTAF1O14981 1849 aa10.96□□□□□ -0.66
CLRN1-201ENST00000295911 CHD4Q14839 1912 aa10.96□□□□□ -0.66
CLRN1-201ENST00000295911 UBAP1LF5GYI3 381 aa10.95□□□□□ -0.66
CLRN1-201ENST00000295911 PHF14O94880 888 aa10.95□□□□□ -0.66
CLRN1-201ENST00000295911 ARID4AP29374 1257 aaPredicted RBP10.95□□□□□ -0.66
CLRN1-201ENST00000295911 ZAP70P43403 619 aa10.95□□□□□ -0.66
CLRN1-201ENST00000295911 FGD1P98174 961 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms