RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 ORAI2Q96SN7 254 aa17.05■□□□□ 0.32
CCNF-201ENST00000293968 FMN2Q9NZ56 1722 aa17.04■□□□□ 0.32
CCNF-201ENST00000293968 NBPF11Q86T75 865 aa17.04■□□□□ 0.32
CCNF-201ENST00000293968 PRC1O43663 620 aa17.04■□□□□ 0.32
CCNF-201ENST00000293968 TAF7LQ5H9L4 462 aa17.04■□□□□ 0.32
CCNF-201ENST00000293968 DHX16O60231 1041 aaKnown RBP17.04■□□□□ 0.32
CCNF-201ENST00000293968 IMMTQ16891 758 aaKnown RBP17.04■□□□□ 0.32
CCNF-201ENST00000293968 LINC00301Q8NCQ3 95 aa17.04■□□□□ 0.32
CCNF-201ENST00000293968 AXIN2Q9Y2T1 843 aa17.04■□□□□ 0.32
CCNF-201ENST00000293968 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.04■□□□□ 0.323e-7■□□□□ 10.1
CCNF-201ENST00000293968 ADGRL3Q9HAR2 1447 aa17.04■□□□□ 0.32
CCNF-201ENST00000293968 ILDR1Q86SU0 546 aaPredicted RBP17.03■□□□□ 0.32
CCNF-201ENST00000293968 PXDNQ92626 1479 aa17.03■□□□□ 0.32
CCNF-201ENST00000293968 ZBTB3Q9H5J0 574 aa17.03■□□□□ 0.32
CCNF-201ENST00000293968 RNF113AO15541 343 aaKnown RBP17.03■□□□□ 0.32
CCNF-201ENST00000293968 ATP2B1P20020 1258 aa17.03■□□□□ 0.32
CCNF-201ENST00000293968 NWD1Q149M9 1564 aa17.03■□□□□ 0.32
CCNF-201ENST00000293968 TTC39AQ5SRH9 613 aa17.03■□□□□ 0.32
CCNF-201ENST00000293968 TAF3Q5VWG9 929 aa17.03■□□□□ 0.32
CCNF-201ENST00000293968 OLFM4Q6UX06 510 aa17.03■□□□□ 0.32
CCNF-201ENST00000293968 HELLSQ9NRZ9 838 aa17.03■□□□□ 0.32
CCNF-201ENST00000293968 TOP1P11387 765 aaKnown RBP17.03■□□□□ 0.32
CCNF-201ENST00000293968 PFKFB1P16118 471 aa17.03■□□□□ 0.32
CCNF-201ENST00000293968 SYKP43405 635 aa17.03■□□□□ 0.32
CCNF-201ENST00000293968 RTEL1Q9NZ71 1219 aa17.03■□□□□ 0.32
CCNF-201ENST00000293968 IMPACTQ9P2X3 320 aa17.03■□□□□ 0.32
CCNF-201ENST00000293968 NALCNQ8IZF0 1738 aa17.02■□□□□ 0.32
CCNF-201ENST00000293968 UTYO14607 1347 aa17.02■□□□□ 0.32
CCNF-201ENST00000293968 PIK3C2AO00443 1686 aa17.02■□□□□ 0.32
CCNF-201ENST00000293968 TATP17735 454 aaPredicted RBP17.02■□□□□ 0.32
CCNF-201ENST00000293968 CLCN6P51797 869 aa17.02■□□□□ 0.32
CCNF-201ENST00000293968 MYSM1Q5VVJ2 828 aa17.02■□□□□ 0.32
CCNF-201ENST00000293968 CARD6Q9BX69 1037 aa17.02■□□□□ 0.32
CCNF-201ENST00000293968 MAST3O60307 1309 aa17.02■□□□□ 0.32
CCNF-201ENST00000293968 M0R2C6 588 aa17.02■□□□□ 0.32
CCNF-201ENST00000293968 SNRPA1P09661 255 aaKnown RBP17.02■□□□□ 0.32
CCNF-201ENST00000293968 LRRC24Q50LG9 513 aa17.02■□□□□ 0.32
CCNF-201ENST00000293968 TEX35Q5T0J7 233 aa17.02■□□□□ 0.32
CCNF-201ENST00000293968 ATL3Q6DD88 541 aa17.02■□□□□ 0.32
CCNF-201ENST00000293968 CHMP4CQ96CF2 233 aa17.02■□□□□ 0.32
CCNF-201ENST00000293968 EPC1Q9H2F5 836 aa17.02■□□□□ 0.32
CCNF-201ENST00000293968 FDPSP14324 419 aaKnown RBP17.02■□□□□ 0.31
CCNF-201ENST00000293968 DSCC1Q9BVC3 393 aa17.02■□□□□ 0.31
CCNF-201ENST00000293968 ZSWIM4Q9H7M6 989 aa17.02■□□□□ 0.31
CCNF-201ENST00000293968 NLRP12P59046 1061 aa17.01■□□□□ 0.31
CCNF-201ENST00000293968 NFXL1Q6ZNB6 911 aa17.01■□□□□ 0.31
CCNF-201ENST00000293968 AIFM3Q96NN9 605 aa17.01■□□□□ 0.31
CCNF-201ENST00000293968 SLC52A2Q9HAB3 445 aa17.01■□□□□ 0.31
CCNF-201ENST00000293968 SEC31AO94979 1220 aaKnown RBP17.01■□□□□ 0.31
CCNF-201ENST00000293968 RFX5P48382 616 aaPredicted RBP17.01■□□□□ 0.31
CCNF-201ENST00000293968 EXOSC10Q01780 885 aaKnown RBP17.01■□□□□ 0.31
CCNF-201ENST00000293968 TRDNQ13061 729 aa17.01■□□□□ 0.31
CCNF-201ENST00000293968 ANO1Q5XXA6 986 aa17.01■□□□□ 0.31
CCNF-201ENST00000293968 SPECC1Q5M775 1068 aa17.01■□□□□ 0.31
CCNF-201ENST00000293968 BBXQ8WY36 941 aaPredicted RBP17.01■□□□□ 0.31
CCNF-201ENST00000293968 ZNF274Q96GC6 653 aaPredicted RBP17.01■□□□□ 0.31
CCNF-201ENST00000293968 OSBPL5Q9H0X9 879 aaPredicted RBP17.01■□□□□ 0.31
CCNF-201ENST00000293968 A0A1B0GUL7 405 aa17■□□□□ 0.31
CCNF-201ENST00000293968 CABP4P57796 275 aa17■□□□□ 0.31
CCNF-201ENST00000293968 PNOCQ13519 176 aa17■□□□□ 0.31
CCNF-201ENST00000293968 CEP126Q9P2H0 1117 aa17■□□□□ 0.31
CCNF-201ENST00000293968 CCDC158Q5M9N0 1113 aa17■□□□□ 0.31
CCNF-201ENST00000293968 ZMYM1Q5SVZ6 1142 aa17■□□□□ 0.31
CCNF-201ENST00000293968 CCDC34Q96HJ3 373 aa17■□□□□ 0.31
CCNF-201ENST00000293968 ZNF446Q9NWS9 450 aa17■□□□□ 0.31
CCNF-201ENST00000293968 CACNA1FO60840 1977 aa17■□□□□ 0.31
CCNF-201ENST00000293968 GNG11P61952 73 aa16.99■□□□□ 0.31
CCNF-201ENST00000293968 ARHGEF25Q86VW2 580 aa16.99■□□□□ 0.31
CCNF-201ENST00000293968 MICU3Q86XE3 530 aa16.99■□□□□ 0.31
CCNF-201ENST00000293968 TOMM22Q9NS69 142 aa16.99■□□□□ 0.31
CCNF-201ENST00000293968 LRRC37A3O60309 1634 aa16.99■□□□□ 0.31
CCNF-201ENST00000293968 OSBP2Q969R2 916 aa16.99■□□□□ 0.31
CCNF-201ENST00000293968 ETF1P62495 437 aaKnown RBP16.99■□□□□ 0.31
CCNF-201ENST00000293968 FBXO18Q8NFZ0 1043 aa16.99■□□□□ 0.31
CCNF-201ENST00000293968 DPF2Q92785 391 aa16.99■□□□□ 0.31
CCNF-201ENST00000293968 TIGD1Q96MW7 591 aa16.99■□□□□ 0.31
CCNF-201ENST00000293968 PUS3Q9BZE2 481 aaKnown RBP16.99■□□□□ 0.31
CCNF-201ENST00000293968 SH3TC1Q8TE82 1336 aa16.99■□□□□ 0.31
CCNF-201ENST00000293968 KIF28PB7ZC32 967 aa16.99■□□□□ 0.31
CCNF-201ENST00000293968 TRIM29Q14134 588 aa16.99■□□□□ 0.31
CCNF-201ENST00000293968 CLIC6Q96NY7 704 aa16.99■□□□□ 0.31
CCNF-201ENST00000293968 ALG1Q9BT22 464 aa16.99■□□□□ 0.31
CCNF-201ENST00000293968 RGPD8O14715 1765 aaPredicted RBP16.99■□□□□ 0.31
CCNF-201ENST00000293968 A0A1W2PQ27 194 aa16.98■□□□□ 0.31
CCNF-201ENST00000293968 A0A1W2PQ64 194 aa16.98■□□□□ 0.31
CCNF-201ENST00000293968 A0A1W2PQD8 194 aa16.98■□□□□ 0.31
CCNF-201ENST00000293968 ZNF213O14771 459 aa16.98■□□□□ 0.31
CCNF-201ENST00000293968 CCP110O43303 1012 aa16.98■□□□□ 0.31
CCNF-201ENST00000293968 CBFA2T2O43439 604 aa16.98■□□□□ 0.31
CCNF-201ENST00000293968 TOPAZ1Q8N9V7 1692 aa16.98■□□□□ 0.31
CCNF-201ENST00000293968 CCDC82Q8N4S0 544 aa16.98■□□□□ 0.31
CCNF-201ENST00000293968 CNNM3Q8NE01 707 aa16.98■□□□□ 0.31
CCNF-201ENST00000293968 PHKBQ93100 1093 aa16.98■□□□□ 0.31
CCNF-201ENST00000293968 CREBRFQ8IUR6 639 aa16.98■□□□□ 0.31
CCNF-201ENST00000293968 EVCP57679 992 aa16.97■□□□□ 0.31
CCNF-201ENST00000293968 PSDA5PKW4 1024 aaPredicted RBP16.97■□□□□ 0.31
CCNF-201ENST00000293968 TMEM232C9JQI7 657 aa16.97■□□□□ 0.31
CCNF-201ENST00000293968 NCOA7Q8NI08 942 aa16.97■□□□□ 0.31
CCNF-201ENST00000293968 YEATS4O95619 227 aa16.97■□□□□ 0.31
CCNF-201ENST00000293968 CPLX2Q6PUV4 134 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms