RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 WASHC4Q2M389 1173 aa17.73■□□□□ 0.43
CCDC116-201ENST00000292779 BICD2Q8TD16 824 aa17.73■□□□□ 0.43
CCDC116-201ENST00000292779 CLSTN2Q9H4D0 955 aa17.73■□□□□ 0.43
CCDC116-201ENST00000292779 TTC12Q9H892 705 aaPredicted RBP17.73■□□□□ 0.43
CCDC116-201ENST00000292779 MYH7P12883 1935 aa17.73■□□□□ 0.43
CCDC116-201ENST00000292779 FOXP2O15409 715 aa17.73■□□□□ 0.43
CCDC116-201ENST00000292779 PDIA3P30101 505 aaKnown RBP17.73■□□□□ 0.43
CCDC116-201ENST00000292779 HMGN5P82970 282 aaKnown RBP17.73■□□□□ 0.43
CCDC116-201ENST00000292779 LRRFIP1Q32MZ4 808 aaKnown RBP17.73■□□□□ 0.43
CCDC116-201ENST00000292779 NAA16Q6N069 864 aaPredicted RBP17.73■□□□□ 0.43
CCDC116-201ENST00000292779 NLRP10Q86W26 655 aa17.73■□□□□ 0.43
CCDC116-201ENST00000292779 FAM200AQ8TCP9 573 aa17.73■□□□□ 0.43
CCDC116-201ENST00000292779 CFAP45Q9UL16 551 aa17.73■□□□□ 0.43
CCDC116-201ENST00000292779 CYP19A1P11511 503 aaPredicted RBP17.72■□□□□ 0.43
CCDC116-201ENST00000292779 PPFIA3O75145 1194 aa17.72■□□□□ 0.43
CCDC116-201ENST00000292779 ZFYP08048 801 aaPredicted RBP17.72■□□□□ 0.43
CCDC116-201ENST00000292779 ADD1P35611 737 aaKnown RBP17.72■□□□□ 0.43
CCDC116-201ENST00000292779 ZAP70P43403 619 aa17.72■□□□□ 0.43
CCDC116-201ENST00000292779 CEBPZQ03701 1054 aaKnown RBP17.72■□□□□ 0.43
CCDC116-201ENST00000292779 ITPK1Q13572 414 aa17.72■□□□□ 0.43
CCDC116-201ENST00000292779 RBM43Q6ZSC3 357 aaKnown RBP17.72■□□□□ 0.43
CCDC116-201ENST00000292779 ZNF274Q96GC6 653 aaPredicted RBP17.72■□□□□ 0.43
CCDC116-201ENST00000292779 GREM2Q9H772 168 aa17.72■□□□□ 0.43
CCDC116-201ENST00000292779 RGS17Q9UGC6 210 aaPredicted RBP17.72■□□□□ 0.43
CCDC116-201ENST00000292779 ZBTB1Q9Y2K1 713 aa17.72■□□□□ 0.43
CCDC116-201ENST00000292779 SALL1Q9NSC2 1324 aa17.71■□□□□ 0.43
CCDC116-201ENST00000292779 ITGA6P23229 1130 aa17.71■□□□□ 0.43
CCDC116-201ENST00000292779 HAND2P61296 217 aa17.71■□□□□ 0.43
CCDC116-201ENST00000292779 HSP90AB3PQ58FF7 597 aa17.71■□□□□ 0.43
CCDC116-201ENST00000292779 PI16Q6UXB8 463 aa17.71■□□□□ 0.43
CCDC116-201ENST00000292779 TTLL11Q8NHH1 800 aa17.71■□□□□ 0.43
CCDC116-201ENST00000292779 RIC1Q4ADV7 1423 aa17.71■□□□□ 0.43
CCDC116-201ENST00000292779 CDHR2Q9BYE9 1310 aa17.7■□□□□ 0.42
CCDC116-201ENST00000292779 CTNNA3Q9UI47 895 aa17.7■□□□□ 0.42
CCDC116-201ENST00000292779 KIF3AQ9Y496 699 aa17.7■□□□□ 0.42
CCDC116-201ENST00000292779 RIPOR2Q9Y4F9 1068 aa17.7■□□□□ 0.42
CCDC116-201ENST00000292779 MYH3P11055 1940 aa17.7■□□□□ 0.42
CCDC116-201ENST00000292779 AKAP11Q9UKA4 1901 aa17.7■□□□□ 0.42
CCDC116-201ENST00000292779 ANO6Q4KMQ2 910 aa17.7■□□□□ 0.42
CCDC116-201ENST00000292779 LDHAL6AQ6ZMR3 332 aa17.7■□□□□ 0.42
CCDC116-201ENST00000292779 LUZP1Q86V48 1076 aa17.7■□□□□ 0.42
CCDC116-201ENST00000292779 PUS7LQ9H0K6 701 aaKnown RBP17.7■□□□□ 0.42
CCDC116-201ENST00000292779 GPHNQ9NQX3 736 aaPredicted RBP17.7■□□□□ 0.42
CCDC116-201ENST00000292779 NHSQ6T4R5 1651 aa17.7■□□□□ 0.42
CCDC116-201ENST00000292779 FGAP02671 866 aa17.69■□□□□ 0.42
CCDC116-201ENST00000292779 ATP2B3Q16720 1220 aa17.69■□□□□ 0.42
CCDC116-201ENST00000292779 IMMTQ16891 758 aaKnown RBP17.69■□□□□ 0.42
CCDC116-201ENST00000292779 METTL24Q5JXM2 366 aa17.69■□□□□ 0.42
CCDC116-201ENST00000292779 PIBF1Q8WXW3 757 aa17.69■□□□□ 0.42
CCDC116-201ENST00000292779 FTOQ9C0B1 505 aaKnown RBP eCLIP17.69■□□□□ 0.42
CCDC116-201ENST00000292779 ANKRD36CQ5JPF3 1778 aa17.69■□□□□ 0.42
CCDC116-201ENST00000292779 CTSWP56202 376 aa17.69■□□□□ 0.42
CCDC116-201ENST00000292779 APPBP2Q92624 585 aa17.69■□□□□ 0.42
CCDC116-201ENST00000292779 LOC102724428A0A0B4J2F2 783 aa17.68■□□□□ 0.42
CCDC116-201ENST00000292779 IRS4O14654 1257 aaPredicted RBP17.68■□□□□ 0.42
CCDC116-201ENST00000292779 SIK1P57059 783 aa17.68■□□□□ 0.42
CCDC116-201ENST00000292779 GUCY1B3Q02153 619 aa17.68■□□□□ 0.42
CCDC116-201ENST00000292779 SMIM5Q71RC9 77 aa17.68■□□□□ 0.42
CCDC116-201ENST00000292779 FBXL16Q8N461 479 aa17.68■□□□□ 0.42
CCDC116-201ENST00000292779 CBX8Q9HC52 389 aa17.68■□□□□ 0.42
CCDC116-201ENST00000292779 TRMT112Q9UI30 125 aaKnown RBP17.68■□□□□ 0.42
CCDC116-201ENST00000292779 ABCC12Q96J65 1359 aa17.68■□□□□ 0.42
CCDC116-201ENST00000292779 FBXO41Q8TF61 875 aa17.68■□□□□ 0.42
CCDC116-201ENST00000292779 RCOR1Q9UKL0 485 aa17.68■□□□□ 0.42
CCDC116-201ENST00000292779 TBC1D2BQ9UPU7 963 aa17.68■□□□□ 0.42
CCDC116-201ENST00000292779 CARMIL3Q8ND23 1372 aa17.67■□□□□ 0.42
CCDC116-201ENST00000292779 MYO5AQ9Y4I1 1855 aaKnown RBP17.67■□□□□ 0.42
CCDC116-201ENST00000292779 ANKRD18BA2A2Z9 1011 aa17.67■□□□□ 0.42
CCDC116-201ENST00000292779 MCAMP43121 646 aa17.67■□□□□ 0.42
CCDC116-201ENST00000292779 EVCP57679 992 aa17.67■□□□□ 0.42
CCDC116-201ENST00000292779 SASS6Q6UVJ0 657 aa17.67■□□□□ 0.42
CCDC116-201ENST00000292779 SPC24Q8NBT2 197 aa17.67■□□□□ 0.42
CCDC116-201ENST00000292779 USP28Q96RU2 1077 aa17.67■□□□□ 0.42
CCDC116-201ENST00000292779 CNNM1Q9NRU3 951 aa17.67■□□□□ 0.42
CCDC116-201ENST00000292779 NUP98P52948 1817 aa17.67■□□□□ 0.42
CCDC116-201ENST00000292779 FDPSP14324 419 aaKnown RBP17.67■□□□□ 0.42
CCDC116-201ENST00000292779 ATP6V1AP38606 617 aa17.67■□□□□ 0.42
CCDC116-201ENST00000292779 NOLC1Q14978 699 aaKnown RBP eCLIP17.67■□□□□ 0.42
CCDC116-201ENST00000292779 C17orf53Q8N3J3 647 aaPredicted RBP17.67■□□□□ 0.42
CCDC116-201ENST00000292779 GPAA1O43292 621 aa17.66■□□□□ 0.42
CCDC116-201ENST00000292779 PRC1O43663 620 aa17.66■□□□□ 0.42
CCDC116-201ENST00000292779 HSP90AA2PQ14568 343 aaPredicted RBP17.66■□□□□ 0.42
CCDC116-201ENST00000292779 ILDR1Q86SU0 546 aaPredicted RBP17.66■□□□□ 0.42
CCDC116-201ENST00000292779 COL5A3P25940 1745 aaPredicted RBP17.65■□□□□ 0.42
CCDC116-201ENST00000292779 DDX60Q8IY21 1712 aaKnown RBP17.65■□□□□ 0.42
CCDC116-201ENST00000292779 UQCRHLA0A096LP55 91 aa17.65■□□□□ 0.42
CCDC116-201ENST00000292779 UQCRHP07919 91 aa17.65■□□□□ 0.42
CCDC116-201ENST00000292779 INTS5Q6P9B9 1019 aaKnown RBP17.65■□□□□ 0.42
CCDC116-201ENST00000292779 DZIP3Q86Y13 1208 aaKnown RBP17.65■□□□□ 0.42
CCDC116-201ENST00000292779 CCAR1Q8IX12 1150 aaKnown RBP17.65■□□□□ 0.42
CCDC116-201ENST00000292779 MB21D2Q8IYB1 491 aaPredicted RBP17.65■□□□□ 0.42
CCDC116-201ENST00000292779 CHMP4CQ96CF2 233 aa17.65■□□□□ 0.42
CCDC116-201ENST00000292779 ZNF396Q96N95 335 aaPredicted RBP17.65■□□□□ 0.42
CCDC116-201ENST00000292779 UBN2Q6ZU65 1347 aa17.65■□□□□ 0.42
CCDC116-201ENST00000292779 RRP9O43818 475 aaKnown RBP17.65■□□□□ 0.42
CCDC116-201ENST00000292779 VGLL2Q8N8G2 317 aa17.65■□□□□ 0.42
CCDC116-201ENST00000292779 DNAJC25Q9H1X3 360 aa17.65■□□□□ 0.42
CCDC116-201ENST00000292779 KCNF1Q9H3M0 494 aa17.65■□□□□ 0.42
CCDC116-201ENST00000292779 DNTTIP2Q5QJE6 756 aaKnown RBP17.64■□□□□ 0.41
CCDC116-201ENST00000292779 ATL3Q6DD88 541 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms