RNA–Protein interactions for RNA: ENST00000288368.4

PREX2-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX2, Length 10,750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX2-201ENST00000288368 CTAGE4Q8IX94 777 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 FRMD4BQ9Y2L6 1034 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 CCDC121Q6ZUS5 278 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 USP48Q86UV5 1035 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 XAGE3Q8WTP9 111 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 PLCG2P16885 1265 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 ZNF830Q96NB3 372 aaPredicted RBP12.51□□□□□ -0.41
PREX2-201ENST00000288368 OPA1O60313 960 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 ANXA1P04083 346 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 CCDC77Q9BR77 488 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 NYXQ9GZU5 481 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 DNMT1P26358 1616 aaKnown RBP12.51□□□□□ -0.41
PREX2-201ENST00000288368 PLCB3Q01970 1234 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 DCAF17Q5H9S7 520 aaPredicted RBP12.51□□□□□ -0.41
PREX2-201ENST00000288368 SP4Q02446 784 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 ADGRF5Q8IZF2 1346 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 DHX58Q96C10 678 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 PKD2L1Q9P0L9 805 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 JAG2Q9Y219 1238 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 SDSP20132 328 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 TMTC2Q8N394 836 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.5□□□□□ -0.41
PREX2-201ENST00000288368 DAAM2Q86T65 1068 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 BRF1Q92994 677 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 PPANQ9NQ55 473 aaKnown RBP12.5□□□□□ -0.41
PREX2-201ENST00000288368 TBC1D32Q96NH3 1257 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 TPD52P55327 224 aaPredicted RBP12.5□□□□□ -0.41
PREX2-201ENST00000288368 JAKMIP2Q96AA8 810 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 RSPH14Q9UHP6 348 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 TCHPQ9BT92 498 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 TXNDC16Q9P2K2 825 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 ATP6V0A2Q9Y487 856 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 UGGT2Q9NYU1 1516 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 KIAA0556O60303 1618 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 GNAT2P19087 354 aa12.5□□□□□ -0.41
PREX2-201ENST00000288368 IFT81Q8WYA0 676 aa12.49□□□□□ -0.41
PREX2-201ENST00000288368 GUCA1BQ9UMX6 200 aa12.49□□□□□ -0.41
PREX2-201ENST00000288368 IL16Q14005 1332 aa12.49□□□□□ -0.41
PREX2-201ENST00000288368 TNRQ92752 1358 aa12.49□□□□□ -0.41
PREX2-201ENST00000288368 IVLP07476 585 aa12.49□□□□□ -0.41
PREX2-201ENST00000288368 MYO10Q9HD67 2058 aa12.49□□□□□ -0.41
PREX2-201ENST00000288368 GNAQP50148 359 aa12.49□□□□□ -0.41
PREX2-201ENST00000288368 NMIQ13287 307 aaPredicted RBP12.49□□□□□ -0.41
PREX2-201ENST00000288368 FBXO31Q5XUX0 539 aaPredicted RBP12.49□□□□□ -0.41
PREX2-201ENST00000288368 TCEANC2Q96MN5 208 aa12.49□□□□□ -0.41
PREX2-201ENST00000288368 CALML3P27482 149 aa12.49□□□□□ -0.41
PREX2-201ENST00000288368 KIF5AQ12840 1032 aa12.49□□□□□ -0.41
PREX2-201ENST00000288368 UVSSAQ2YD98 709 aa12.49□□□□□ -0.41
PREX2-201ENST00000288368 TMX3Q96JJ7 454 aa12.49□□□□□ -0.41
PREX2-201ENST00000288368 PRIMPOLQ96LW4 560 aa12.49□□□□□ -0.41
PREX2-201ENST00000288368 NOL3O60936 208 aaKnown RBP12.49□□□□□ -0.41
PREX2-201ENST00000288368 SLC9C2Q5TAH2 1124 aa12.49□□□□□ -0.41
PREX2-201ENST00000288368 GRM8O00222 908 aa12.49□□□□□ -0.41
PREX2-201ENST00000288368 ACEP12821 1306 aa12.48□□□□□ -0.41
PREX2-201ENST00000288368 TRIM75PA6NK02 468 aa12.48□□□□□ -0.41
PREX2-201ENST00000288368 SEL1L2Q5TEA6 688 aa12.48□□□□□ -0.41
PREX2-201ENST00000288368 MAP3K5Q99683 1374 aa12.48□□□□□ -0.41
PREX2-201ENST00000288368 SLU7O95391 586 aaKnown RBP12.48□□□□□ -0.41
PREX2-201ENST00000288368 PARP1P09874 1014 aaKnown RBP12.48□□□□□ -0.41
PREX2-201ENST00000288368 DNAJC21Q5F1R6 531 aaKnown RBP12.48□□□□□ -0.41
PREX2-201ENST00000288368 DNAI1Q9UI46 699 aa12.48□□□□□ -0.41
PREX2-201ENST00000288368 ZBTB9Q96C00 473 aa12.48□□□□□ -0.41
PREX2-201ENST00000288368 NIP7Q9Y221 180 aaKnown RBP eCLIP12.48□□□□□ -0.41
PREX2-201ENST00000288368 RBM8AQ9Y5S9 174 aaKnown RBP12.48□□□□□ -0.41
PREX2-201ENST00000288368 KRT86O43790 486 aa12.48□□□□□ -0.41
PREX2-201ENST00000288368 MIGA1Q8NAN2 632 aa12.48□□□□□ -0.41
PREX2-201ENST00000288368 LMOD1P29536 600 aaPredicted RBP12.48□□□□□ -0.41
PREX2-201ENST00000288368 CCDC65Q8IXS2 484 aa12.48□□□□□ -0.41
PREX2-201ENST00000288368 UBLCP1Q8WVY7 318 aaPredicted RBP12.48□□□□□ -0.41
PREX2-201ENST00000288368 CCDC117Q8IWD4 279 aaPredicted RBP12.48□□□□□ -0.41
PREX2-201ENST00000288368 TRAF1Q13077 416 aa12.48□□□□□ -0.41
PREX2-201ENST00000288368 HAUS7Q99871 368 aa12.48□□□□□ -0.41
PREX2-201ENST00000288368 PARP3Q9Y6F1 533 aa12.48□□□□□ -0.41
PREX2-201ENST00000288368 RIMS2Q9UQ26 1411 aa12.48□□□□□ -0.41
PREX2-201ENST00000288368 SPAG1Q07617 926 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 UAP1Q16222 522 aaPredicted RBP12.47□□□□□ -0.41
PREX2-201ENST00000288368 CHST3Q7LGC8 479 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 MCM9Q9NXL9 1143 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 DNM1Q05193 864 aaKnown RBP12.47□□□□□ -0.41
PREX2-201ENST00000288368 RASA3Q14644 834 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 FAM200AQ8TCP9 573 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 PODXL2Q9NZ53 605 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 ATRIPQ8WXE1 791 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 KIFC2Q96AC6 838 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 DNAJC25Q9H1X3 360 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 GMNNO75496 209 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 PLIN2Q99541 437 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 CHMP2AO43633 222 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 RHPN1Q8TCX5 695 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 ABCA5Q8WWZ7 1642 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 TYRO3Q06418 890 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 RAB3GAP1Q15042 981 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 SEC62Q99442 399 aaKnown RBP12.47□□□□□ -0.41
PREX2-201ENST00000288368 TRIM7Q9C029 511 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 AGTPBP1Q9UPW5 1226 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 SBNO2Q9Y2G9 1366 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 ZFYVE9O95405 1425 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 BACH1O14867 736 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 SPTLC2O15270 562 aa12.47□□□□□ -0.41
PREX2-201ENST00000288368 TBC1D31Q96DN5 1066 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms