RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 CERS5Q8N5B7 392 aa31.16■■■□□ 2.58
PDF-201ENST00000288022 TFCP2Q12800 502 aa31.15■■■□□ 2.58
PDF-201ENST00000288022 POLA2Q14181 598 aa31.15■■■□□ 2.58
PDF-201ENST00000288022 C20orf194Q5TEA3 1177 aa31.15■■■□□ 2.58
PDF-201ENST00000288022 GLIS2Q9BZE0 524 aaPredicted RBP31.15■■■□□ 2.58
PDF-201ENST00000288022 FAM205AQ6ZU69 1335 aa31.15■■■□□ 2.58
PDF-201ENST00000288022 F8W031 263 aaPredicted RBP31.14■■■□□ 2.58
PDF-201ENST00000288022 TRAF5O00463 557 aa31.14■■■□□ 2.58
PDF-201ENST00000288022 CHAF1AQ13111 956 aaPredicted RBP31.14■■■□□ 2.58
PDF-201ENST00000288022 PDE3AQ14432 1141 aa31.14■■■□□ 2.58
PDF-201ENST00000288022 SSH3Q8TE77 659 aa31.14■■■□□ 2.58
PDF-201ENST00000288022 DCPSQ96C86 337 aaKnown RBP31.14■■■□□ 2.58
PDF-201ENST00000288022 FKBP1AP62942 108 aaKnown RBP31.13■■■□□ 2.57
PDF-201ENST00000288022 SCARF1Q14162 830 aa31.13■■■□□ 2.57
PDF-201ENST00000288022 CDC37L1Q7L3B6 337 aa31.13■■■□□ 2.57
PDF-201ENST00000288022 CHMP4BQ9H444 224 aaKnown RBP31.13■■■□□ 2.57
PDF-201ENST00000288022 GGA3Q9NZ52 723 aa31.13■■■□□ 2.57
PDF-201ENST00000288022 MMP14P50281 582 aa31.12■■■□□ 2.57
PDF-201ENST00000288022 FMR1Q06787 632 aaKnown RBP eCLIP31.12■■■□□ 2.57
PDF-201ENST00000288022 OS9Q13438 667 aaPredicted RBP31.12■■■□□ 2.57
PDF-201ENST00000288022 MFSD14BQ5SR56 506 aa31.12■■■□□ 2.57
PDF-201ENST00000288022 CREBZFQ9NS37 354 aa31.12■■■□□ 2.57
PDF-201ENST00000288022 AKAP2Q9Y2D5 859 aa31.12■■■□□ 2.57
PDF-201ENST00000288022 TMEM88BA6NKF7 163 aa31.11■■■□□ 2.57
PDF-201ENST00000288022 ASTN2O75129 1339 aaPredicted RBP31.11■■■□□ 2.57
PDF-201ENST00000288022 CEP85Q6P2H3 762 aa31.11■■■□□ 2.57
PDF-201ENST00000288022 USP48Q86UV5 1035 aa31.11■■■□□ 2.57
PDF-201ENST00000288022 SURF6O75683 361 aaKnown RBP31.1■■■□□ 2.57
PDF-201ENST00000288022 ANGEL2Q5VTE6 544 aaKnown RBP31.1■■■□□ 2.57
PDF-201ENST00000288022 KRT26Q7Z3Y9 468 aa31.1■■■□□ 2.57
PDF-201ENST00000288022 TIMM10P62072 90 aa31.09■■■□□ 2.57
PDF-201ENST00000288022 GNL3LQ9NVN8 582 aaKnown RBP31.09■■■□□ 2.57
PDF-201ENST00000288022 ADORA1P30542 326 aa31.08■■■□□ 2.57
PDF-201ENST00000288022 NBPF9Q3BBW0 867 aa31.08■■■□□ 2.57
PDF-201ENST00000288022 SULF1Q8IWU6 871 aa31.08■■■□□ 2.57
PDF-201ENST00000288022 ZBTB40Q9NUA8 1239 aa31.08■■■□□ 2.57
PDF-201ENST00000288022 ARAP2Q8WZ64 1704 aa31.07■■■□□ 2.56
PDF-201ENST00000288022 A0A1B0GUL7 405 aa31.07■■■□□ 2.56
PDF-201ENST00000288022 TBC1D22AQ8WUA7 517 aa31.07■■■□□ 2.56
PDF-201ENST00000288022 NEUROD6Q96NK8 337 aa31.07■■■□□ 2.56
PDF-201ENST00000288022 ZNF408Q9H9D4 720 aa31.07■■■□□ 2.56
PDF-201ENST00000288022 MYH13Q9UKX3 1938 aa31.06■■■□□ 2.56
PDF-201ENST00000288022 ADM5C9JUS6 153 aa31.06■■■□□ 2.56
PDF-201ENST00000288022 WNT10BO00744 389 aa31.06■■■□□ 2.56
PDF-201ENST00000288022 DLGAP5Q15398 846 aa31.06■■■□□ 2.56
PDF-201ENST00000288022 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.06■■■□□ 2.56
PDF-201ENST00000288022 TRPM7Q96QT4 1865 aa31.06■■■□□ 2.56
PDF-201ENST00000288022 DNAJC5GQ8N7S2 189 aa31.05■■■□□ 2.56
PDF-201ENST00000288022 TTF2Q9UNY4 1162 aaKnown RBP31.05■■■□□ 2.56
PDF-201ENST00000288022 CELF2O95319 508 aaKnown RBP31.04■■■□□ 2.56
PDF-201ENST00000288022 PHKA1P46020 1223 aa31.04■■■□□ 2.56
PDF-201ENST00000288022 RBM5P52756 815 aaKnown RBP eCLIP31.04■■■□□ 2.56
PDF-201ENST00000288022 XAGE2Q96GT9 111 aa31.04■■■□□ 2.56
PDF-201ENST00000288022 ABT1Q9ULW3 272 aaKnown RBP31.04■■■□□ 2.56
PDF-201ENST00000288022 POLR2AP24928 1970 aaKnown RBP31.03■■■□□ 2.56
PDF-201ENST00000288022 CFAP100Q494V2 611 aa31.03■■■□□ 2.56
PDF-201ENST00000288022 CCDC102BQ68D86 513 aa31.03■■■□□ 2.56
PDF-201ENST00000288022 DLK2Q6UY11 383 aa31.03■■■□□ 2.56
PDF-201ENST00000288022 KLRG1Q96E93 195 aa31.03■■■□□ 2.56
PDF-201ENST00000288022 NOP58Q9Y2X3 529 aaKnown RBP31.03■■■□□ 2.56
PDF-201ENST00000288022 PITPNM2Q9BZ72 1349 aa31.02■■■□□ 2.56
PDF-201ENST00000288022 RRP1P56182 461 aaKnown RBP31.02■■■□□ 2.56
PDF-201ENST00000288022 GORABQ5T7V8 394 aa31.02■■■□□ 2.56
PDF-201ENST00000288022 CST9Q5W186 159 aa31.02■■■□□ 2.56
PDF-201ENST00000288022 RPAP2Q8IXW5 612 aaPredicted RBP31.02■■■□□ 2.56
PDF-201ENST00000288022 WDR66Q8TBY9 1149 aa31.01■■■□□ 2.55
PDF-201ENST00000288022 MKRN1Q9UHC7 482 aaKnown RBP31.01■■■□□ 2.55
PDF-201ENST00000288022 HMMRO75330 724 aa31■■■□□ 2.55
PDF-201ENST00000288022 GRIK5Q16478 980 aa31■■■□□ 2.55
PDF-201ENST00000288022 ZBED3Q96IU2 234 aaPredicted RBP31■■■□□ 2.55
PDF-201ENST00000288022 DENND2AQ9ULE3 1009 aa31■■■□□ 2.55
PDF-201ENST00000288022 SCAF8Q9UPN6 1271 aaKnown RBP31■■■□□ 2.55
PDF-201ENST00000288022 PCDHAC2Q9Y5I4 1007 aa31■■■□□ 2.55
PDF-201ENST00000288022 COL1A1P02452 1464 aaPredicted RBP31■■■□□ 2.55
PDF-201ENST00000288022 SEMA3EO15041 775 aa30.99■■■□□ 2.55
PDF-201ENST00000288022 MTMR14Q8NCE2 650 aa30.99■■■□□ 2.55
PDF-201ENST00000288022 EXOC6BQ9Y2D4 811 aa30.99■■■□□ 2.55
PDF-201ENST00000288022 MYO1BO43795 1136 aa30.98■■■□□ 2.55
PDF-201ENST00000288022 TNNI3KQ59H18 835 aa30.98■■■□□ 2.55
PDF-201ENST00000288022 SERPINA10Q9UK55 444 aa30.98■■■□□ 2.55
PDF-201ENST00000288022 FPGT-TNNI3KV9GXZ4 949 aa30.98■■■□□ 2.55
PDF-201ENST00000288022 SPDYE2BA6NHP3 402 aa30.97■■■□□ 2.55
PDF-201ENST00000288022 SPDYE6P0CI01 402 aa30.97■■■□□ 2.55
PDF-201ENST00000288022 GPR108Q9NPR9 543 aa30.97■■■□□ 2.55
PDF-201ENST00000288022 APOBEC3FQ8IUX4 373 aaKnown RBP30.96■■■□□ 2.55
PDF-201ENST00000288022 CDCA5Q96FF9 252 aa30.96■■■□□ 2.55
PDF-201ENST00000288022 PRMT6Q96LA8 375 aaPredicted RBP30.96■■■□□ 2.55
PDF-201ENST00000288022 SUGT1Q9Y2Z0 365 aa30.96■■■□□ 2.55
PDF-201ENST00000288022 CNTNAP1P78357 1384 aa30.95■■■□□ 2.55
PDF-201ENST00000288022 CRKP46108 304 aa30.95■■■□□ 2.55
PDF-201ENST00000288022 HSP90AB4PQ58FF6 505 aa30.95■■■□□ 2.55
PDF-201ENST00000288022 ERC1Q8IUD2 1116 aa30.95■■■□□ 2.55
PDF-201ENST00000288022 MAST3O60307 1309 aa30.95■■■□□ 2.54
PDF-201ENST00000288022 CLRN2A0PK11 232 aa30.94■■■□□ 2.54
PDF-201ENST00000288022 RASGRF1Q13972 1273 aa30.94■■■□□ 2.54
PDF-201ENST00000288022 DEFB115Q30KQ5 88 aa30.94■■■□□ 2.54
PDF-201ENST00000288022 SIRT2Q8IXJ6 389 aa30.94■■■□□ 2.54
PDF-201ENST00000288022 CEP350Q5VT06 3117 aa30.94■■■□□ 2.54
PDF-201ENST00000288022 ECM29Q5VYK3 1845 aa30.94■■■□□ 2.54
PDF-201ENST00000288022 PAXIP1Q6ZW49 1069 aaPredicted RBP30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms