RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 RAB3GAP1Q15042 981 aa21.13■□□□□ 0.97
PCDH1-201ENST00000287008 CERS3Q8IU89 383 aa21.13■□□□□ 0.97
PCDH1-201ENST00000287008 LPIN2Q92539 896 aa21.13■□□□□ 0.97
PCDH1-201ENST00000287008 XAGE2Q96GT9 111 aa21.13■□□□□ 0.97
PCDH1-201ENST00000287008 KLHDC4Q8TBB5 520 aa21.13■□□□□ 0.97
PCDH1-201ENST00000287008 PHACTR2O75167 634 aa21.13■□□□□ 0.97
PCDH1-201ENST00000287008 CCDC24Q8N4L8 307 aa21.13■□□□□ 0.97
PCDH1-201ENST00000287008 PICK1Q9NRD5 415 aa21.13■□□□□ 0.97
PCDH1-201ENST00000287008 AKR1B10O60218 316 aa21.13■□□□□ 0.97
PCDH1-201ENST00000287008 HOOK3Q86VS8 718 aa21.13■□□□□ 0.97
PCDH1-201ENST00000287008 ZNF594Q96JF6 807 aaPredicted RBP21.13■□□□□ 0.97
PCDH1-201ENST00000287008 CRACR2AQ9BSW2 395 aa21.13■□□□□ 0.97
PCDH1-201ENST00000287008 PARP1P09874 1014 aaKnown RBP21.12■□□□□ 0.97
PCDH1-201ENST00000287008 NOP2P46087 812 aaKnown RBP21.12■□□□□ 0.97
PCDH1-201ENST00000287008 VSIG10Q8N0Z9 540 aa21.12■□□□□ 0.97
PCDH1-201ENST00000287008 APPBP2Q92624 585 aa21.12■□□□□ 0.97
PCDH1-201ENST00000287008 TMEM94Q12767 1356 aa21.12■□□□□ 0.97
PCDH1-201ENST00000287008 TMCO5BA8MYB1 307 aa21.12■□□□□ 0.97
PCDH1-201ENST00000287008 NCBP1Q09161 790 aaKnown RBP21.12■□□□□ 0.97
PCDH1-201ENST00000287008 SPTLC2O15270 562 aa21.12■□□□□ 0.97
PCDH1-201ENST00000287008 FLAD1Q8NFF5 587 aa21.11■□□□□ 0.97
PCDH1-201ENST00000287008 SAP30BPQ9UHR5 308 aaKnown RBP21.11■□□□□ 0.97
PCDH1-201ENST00000287008 TNNT1P13805 278 aa21.11■□□□□ 0.97
PCDH1-201ENST00000287008 EIF4A1P60842 406 aaKnown RBP21.11■□□□□ 0.97
PCDH1-201ENST00000287008 KLHL40Q2TBA0 621 aa21.11■□□□□ 0.97
PCDH1-201ENST00000287008 ALS2CR12Q96Q35 445 aa21.11■□□□□ 0.97
PCDH1-201ENST00000287008 MMRN2Q9H8L6 949 aa21.11■□□□□ 0.97
PCDH1-201ENST00000287008 USP19O94966 1318 aa21.11■□□□□ 0.97
PCDH1-201ENST00000287008 KRT2P35908 639 aa21.1■□□□□ 0.97
PCDH1-201ENST00000287008 CCDC102AQ96A19 550 aa21.1■□□□□ 0.97
PCDH1-201ENST00000287008 YEATS2Q9ULM3 1422 aa21.1■□□□□ 0.97
PCDH1-201ENST00000287008 ALDH1B1P30837 517 aa21.1■□□□□ 0.97
PCDH1-201ENST00000287008 TAF5LO75529 589 aa21.1■□□□□ 0.97
PCDH1-201ENST00000287008 AK2P54819 239 aa21.1■□□□□ 0.97
PCDH1-201ENST00000287008 RPS8P62241 208 aaKnown RBP21.1■□□□□ 0.97
PCDH1-201ENST00000287008 HS2ST1Q7LGA3 356 aa21.1■□□□□ 0.97
PCDH1-201ENST00000287008 HOOK2Q96ED9 719 aa21.1■□□□□ 0.97
PCDH1-201ENST00000287008 IMPG2Q9BZV3 1241 aa21.1■□□□□ 0.97
PCDH1-201ENST00000287008 RBM28Q9NW13 759 aaKnown RBP21.1■□□□□ 0.97
PCDH1-201ENST00000287008 BACH1O14867 736 aa21.1■□□□□ 0.97
PCDH1-201ENST00000287008 ECM2O94769 699 aaPredicted RBP21.1■□□□□ 0.97
PCDH1-201ENST00000287008 PTPDC1A2A3K4 754 aa21.09■□□□□ 0.97
PCDH1-201ENST00000287008 TCIRG1Q13488 830 aa21.09■□□□□ 0.97
PCDH1-201ENST00000287008 ARHGEF10LQ9HCE6 1279 aa21.09■□□□□ 0.97
PCDH1-201ENST00000287008 TRIM35Q9UPQ4 493 aa21.09■□□□□ 0.97
PCDH1-201ENST00000287008 ZKSCAN3Q9BRR0 538 aa21.09■□□□□ 0.97
PCDH1-201ENST00000287008 F13A1P00488 732 aa21.09■□□□□ 0.97
PCDH1-201ENST00000287008 RXRAP19793 462 aa21.09■□□□□ 0.97
PCDH1-201ENST00000287008 SUCLG2Q96I99 432 aa21.09■□□□□ 0.97
PCDH1-201ENST00000287008 ZNF408Q9H9D4 720 aa21.09■□□□□ 0.97
PCDH1-201ENST00000287008 PTPRTO14522 1441 aa21.08■□□□□ 0.97
PCDH1-201ENST00000287008 GIMAP6Q6P9H5 292 aa21.08■□□□□ 0.97
PCDH1-201ENST00000287008 TBC1D22AQ8WUA7 517 aa21.08■□□□□ 0.97
PCDH1-201ENST00000287008 DHX58Q96C10 678 aa21.08■□□□□ 0.97
PCDH1-201ENST00000287008 CFAP43Q8NDM7 1665 aa21.08■□□□□ 0.96
PCDH1-201ENST00000287008 CASQ1P31415 396 aa21.08■□□□□ 0.96
PCDH1-201ENST00000287008 CCDC97Q96F63 343 aaPredicted RBP21.08■□□□□ 0.96
PCDH1-201ENST00000287008 TMOD4Q9NZQ9 345 aa21.08■□□□□ 0.96
PCDH1-201ENST00000287008 PHKG2P15735 406 aa21.08■□□□□ 0.96
PCDH1-201ENST00000287008 TMEM87BQ96K49 555 aa21.08■□□□□ 0.96
PCDH1-201ENST00000287008 ARMT1Q9H993 441 aa21.08■□□□□ 0.96
PCDH1-201ENST00000287008 DTHD1Q6ZMT9 781 aa21.07■□□□□ 0.96
PCDH1-201ENST00000287008 NIM1KQ8IY84 436 aa21.07■□□□□ 0.96
PCDH1-201ENST00000287008 TBC1D5Q92609 795 aa21.07■□□□□ 0.96
PCDH1-201ENST00000287008 TRMT1Q9NXH9 659 aaKnown RBP21.07■□□□□ 0.96
PCDH1-201ENST00000287008 CNPY2Q9Y2B0 182 aa21.07■□□□□ 0.96
PCDH1-201ENST00000287008 B4E1Z4 1266 aa21.07■□□□□ 0.96
PCDH1-201ENST00000287008 DACT1Q9NYF0 836 aa21.07■□□□□ 0.96
PCDH1-201ENST00000287008 PRPF4BQ13523 1007 aaKnown RBP21.07■□□□□ 0.96
PCDH1-201ENST00000287008 MAP9Q49MG5 647 aa21.07■□□□□ 0.96
PCDH1-201ENST00000287008 RUFY3Q7L099 469 aa21.07■□□□□ 0.96
PCDH1-201ENST00000287008 BRAPQ7Z569 592 aa21.07■□□□□ 0.96
PCDH1-201ENST00000287008 GPAA1O43292 621 aa21.06■□□□□ 0.96
PCDH1-201ENST00000287008 FAM13AO94988 1023 aa21.06■□□□□ 0.96
PCDH1-201ENST00000287008 CTAGE1Q96RT6 745 aa21.06■□□□□ 0.96
PCDH1-201ENST00000287008 GOLGA6L7A0A1B0GV03 622 aa21.06■□□□□ 0.96
PCDH1-201ENST00000287008 DNM1Q05193 864 aaKnown RBP21.06■□□□□ 0.96
PCDH1-201ENST00000287008 FERMT1Q9BQL6 677 aa21.06■□□□□ 0.96
PCDH1-201ENST00000287008 SYNCQ9H7C4 482 aa21.06■□□□□ 0.96
PCDH1-201ENST00000287008 BIN2Q9UBW5 565 aaPredicted RBP21.06■□□□□ 0.96
PCDH1-201ENST00000287008 TRPC5Q9UL62 973 aaPredicted RBP21.06■□□□□ 0.96
PCDH1-201ENST00000287008 MROH5Q6ZUA9 1318 aa21.06■□□□□ 0.96
PCDH1-201ENST00000287008 GOLGA6L9A6NEM1 432 aa21.06■□□□□ 0.96
PCDH1-201ENST00000287008 KIAA0754O94854 1291 aa21.06■□□□□ 0.96
PCDH1-201ENST00000287008 SP4Q02446 784 aa21.06■□□□□ 0.96
PCDH1-201ENST00000287008 KBTBD3Q8NAB2 608 aa21.06■□□□□ 0.96
PCDH1-201ENST00000287008 SNX21Q969T3 373 aa21.06■□□□□ 0.96
PCDH1-201ENST00000287008 NAP1L4Q99733 375 aaKnown RBP21.06■□□□□ 0.96
PCDH1-201ENST00000287008 ACTN2P35609 894 aa21.05■□□□□ 0.96
PCDH1-201ENST00000287008 NAA15Q9BXJ9 866 aaKnown RBP21.05■□□□□ 0.96
PCDH1-201ENST00000287008 TAOK3Q9H2K8 898 aa21.05■□□□□ 0.96
PCDH1-201ENST00000287008 MCM7P33993 719 aa21.05■□□□□ 0.96
PCDH1-201ENST00000287008 UBASH3AP57075 661 aa21.05■□□□□ 0.96
PCDH1-201ENST00000287008 GPCPD1Q9NPB8 672 aa21.05■□□□□ 0.96
PCDH1-201ENST00000287008 GIGYF1O75420 1035 aaPredicted RBP21.05■□□□□ 0.96
PCDH1-201ENST00000287008 RBM10P98175 930 aaKnown RBP21.05■□□□□ 0.96
PCDH1-201ENST00000287008 TMCO3Q6UWJ1 677 aa21.05■□□□□ 0.96
PCDH1-201ENST00000287008 MAP3K9P80192 1104 aa21.05■□□□□ 0.96
PCDH1-201ENST00000287008 GTPBP4Q9BZE4 634 aaKnown RBP21.05■□□□□ 0.96
PCDH1-201ENST00000287008 CFAP65Q6ZU64 1925 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms