RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 BCAMP50895 628 aa18.16■□□□□ 0.5
SF3B4-201ENST00000271628 TOB2Q14106 344 aaPredicted RBP18.16■□□□□ 0.5
SF3B4-201ENST00000271628 CAVIN4Q5BKX8 364 aa18.16■□□□□ 0.5
SF3B4-201ENST00000271628 CCDC83Q8IWF9 413 aa18.16■□□□□ 0.5
SF3B4-201ENST00000271628 CELF1Q92879 486 aaKnown RBP18.16■□□□□ 0.5
SF3B4-201ENST00000271628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.16■□□□□ 0.5
SF3B4-201ENST00000271628 TRIM37O94972 964 aa18.16■□□□□ 0.5
SF3B4-201ENST00000271628 RBM6P78332 1123 aaKnown RBP18.16■□□□□ 0.5
SF3B4-201ENST00000271628 KLHL40Q2TBA0 621 aa18.16■□□□□ 0.5
SF3B4-201ENST00000271628 ANO8Q9HCE9 1232 aaPredicted RBP18.16■□□□□ 0.5
SF3B4-201ENST00000271628 ZNF532Q9HCE3 1301 aa18.15■□□□□ 0.5
SF3B4-201ENST00000271628 E7EWF7 191 aa18.15■□□□□ 0.5
SF3B4-201ENST00000271628 FGAP02671 866 aa18.15■□□□□ 0.5
SF3B4-201ENST00000271628 PDE6AP16499 860 aa18.15■□□□□ 0.5
SF3B4-201ENST00000271628 MCTP1Q6DN14 999 aa18.15■□□□□ 0.5
SF3B4-201ENST00000271628 ANKRD2Q9GZV1 360 aa18.15■□□□□ 0.5
SF3B4-201ENST00000271628 EP400Q96L91 3159 aa18.15■□□□□ 0.5
SF3B4-201ENST00000271628 ZNF804BA4D1E1 1349 aa18.15■□□□□ 0.5
SF3B4-201ENST00000271628 Q6ZUG5 572 aa18.14■□□□□ 0.5
SF3B4-201ENST00000271628 TCEANC2Q96MN5 208 aa18.14■□□□□ 0.5
SF3B4-201ENST00000271628 RRAGDQ9NQL2 400 aaPredicted RBP18.14■□□□□ 0.5
SF3B4-201ENST00000271628 UBR3Q6ZT12 1888 aa18.14■□□□□ 0.49
SF3B4-201ENST00000271628 DOCK2Q92608 1830 aa18.14■□□□□ 0.49
SF3B4-201ENST00000271628 A0A1B0GUL6 1792 aa18.14■□□□□ 0.49
SF3B4-201ENST00000271628 TCRBV5S4A2TA0A5A2 114 aa18.14■□□□□ 0.49
SF3B4-201ENST00000271628 FGD1P98174 961 aa18.14■□□□□ 0.49
SF3B4-201ENST00000271628 NFIXQ14938 502 aa18.14■□□□□ 0.49
SF3B4-201ENST00000271628 STOX1Q6ZVD7 989 aa18.14■□□□□ 0.49
SF3B4-201ENST00000271628 MYO5AQ9Y4I1 1855 aaKnown RBP18.13■□□□□ 0.49
SF3B4-201ENST00000271628 GJB2P29033 226 aa18.13■□□□□ 0.49
SF3B4-201ENST00000271628 COL9A3Q14050 684 aaPredicted RBP18.13■□□□□ 0.49
SF3B4-201ENST00000271628 AIDAQ96BJ3 306 aa18.13■□□□□ 0.49
SF3B4-201ENST00000271628 TAF1P21675 1872 aa18.13■□□□□ 0.49
SF3B4-201ENST00000271628 ZNF213O14771 459 aa18.13■□□□□ 0.49
SF3B4-201ENST00000271628 FOXP2O15409 715 aa18.13■□□□□ 0.49
SF3B4-201ENST00000271628 STX6O43752 255 aa18.13■□□□□ 0.49
SF3B4-201ENST00000271628 EXOSC10Q01780 885 aaKnown RBP18.13■□□□□ 0.49
SF3B4-201ENST00000271628 VPS37DQ86XT2 251 aa18.13■□□□□ 0.49
SF3B4-201ENST00000271628 CNBD1Q8NA66 436 aa18.13■□□□□ 0.49
SF3B4-201ENST00000271628 COL4A1P02462 1669 aa18.12■□□□□ 0.49
SF3B4-201ENST00000271628 LAMA4Q16363 1823 aa18.12■□□□□ 0.49
SF3B4-201ENST00000271628 SYT1P21579 422 aa18.12■□□□□ 0.49
SF3B4-201ENST00000271628 TM4SF1P30408 202 aa18.12■□□□□ 0.49
SF3B4-201ENST00000271628 AGXT2Q9BYV1 514 aa18.12■□□□□ 0.49
SF3B4-201ENST00000271628 WWC3Q9ULE0 1092 aa18.12■□□□□ 0.49
SF3B4-201ENST00000271628 TTLL5Q6EMB2 1281 aa18.11■□□□□ 0.49
SF3B4-201ENST00000271628 FBXL16Q8N461 479 aa18.11■□□□□ 0.49
SF3B4-201ENST00000271628 MAGEB6Q8N7X4 407 aa18.11■□□□□ 0.49
SF3B4-201ENST00000271628 NECAB1Q8N987 351 aa18.11■□□□□ 0.49
SF3B4-201ENST00000271628 CHMP4CQ96CF2 233 aa18.11■□□□□ 0.49
SF3B4-201ENST00000271628 DDX49Q9Y6V7 483 aaKnown RBP18.11■□□□□ 0.49
SF3B4-201ENST00000271628 SEMA3EO15041 775 aa18.11■□□□□ 0.49
SF3B4-201ENST00000271628 GYS1P13807 737 aa18.11■□□□□ 0.49
SF3B4-201ENST00000271628 PDCP20941 246 aa18.11■□□□□ 0.49
SF3B4-201ENST00000271628 LRP2BPQ9P2M1 347 aa18.11■□□□□ 0.49
SF3B4-201ENST00000271628 DENND2AQ9ULE3 1009 aa18.11■□□□□ 0.49
SF3B4-201ENST00000271628 ATP6V1DQ9Y5K8 247 aa18.11■□□□□ 0.49
SF3B4-201ENST00000271628 ZSCAN22P10073 491 aaPredicted RBP18.1■□□□□ 0.49
SF3B4-201ENST00000271628 ST3GAL1Q11201 340 aa18.1■□□□□ 0.49
SF3B4-201ENST00000271628 TXNRD1Q16881 649 aa18.1■□□□□ 0.49
SF3B4-201ENST00000271628 GAS2L3Q86XJ1 694 aa18.1■□□□□ 0.49
SF3B4-201ENST00000271628 BRF1Q92994 677 aa18.1■□□□□ 0.49
SF3B4-201ENST00000271628 STRBPQ96SI9 672 aaKnown RBP18.1■□□□□ 0.49
SF3B4-201ENST00000271628 LMBRD1Q9NUN5 540 aa18.1■□□□□ 0.49
SF3B4-201ENST00000271628 PATL2C9JE40 543 aaKnown RBP18.1■□□□□ 0.49
SF3B4-201ENST00000271628 APPP05067 770 aa18.1■□□□□ 0.49
SF3B4-201ENST00000271628 GNAT2P19087 354 aa18.1■□□□□ 0.49
SF3B4-201ENST00000271628 GYG1P46976 350 aa18.1■□□□□ 0.49
SF3B4-201ENST00000271628 ALX1Q15699 326 aa18.1■□□□□ 0.49
SF3B4-201ENST00000271628 FOXD4L5Q5VV16 416 aaPredicted RBP18.1■□□□□ 0.49
SF3B4-201ENST00000271628 CCDC24Q8N4L8 307 aa18.1■□□□□ 0.49
SF3B4-201ENST00000271628 FOXD4L4Q8WXT5 416 aaPredicted RBP18.1■□□□□ 0.49
SF3B4-201ENST00000271628 ZMYM6O95789 1325 aa18.09■□□□□ 0.49
SF3B4-201ENST00000271628 PLSCR1O15162 318 aa18.09■□□□□ 0.49
SF3B4-201ENST00000271628 CLCN1P35523 988 aa18.09■□□□□ 0.49
SF3B4-201ENST00000271628 NCOA7Q8NI08 942 aa18.09■□□□□ 0.49
SF3B4-201ENST00000271628 GTF3C6Q969F1 213 aa18.09■□□□□ 0.49
SF3B4-201ENST00000271628 FAM84BQ96KN1 310 aaPredicted RBP18.09■□□□□ 0.49
SF3B4-201ENST00000271628 ST5P78524 1137 aa18.08■□□□□ 0.49
SF3B4-201ENST00000271628 FBXO33Q7Z6M2 555 aa18.08■□□□□ 0.49
SF3B4-201ENST00000271628 ZBTB22O15209 634 aa18.08■□□□□ 0.48
SF3B4-201ENST00000271628 MCM5P33992 734 aa18.08■□□□□ 0.48
SF3B4-201ENST00000271628 TRDNQ13061 729 aa18.08■□□□□ 0.48
SF3B4-201ENST00000271628 GRAPQ13588 217 aa18.08■□□□□ 0.48
SF3B4-201ENST00000271628 PRR5LQ6MZQ0 368 aa18.08■□□□□ 0.48
SF3B4-201ENST00000271628 RALYLQ86SE5 291 aaKnown RBP18.08■□□□□ 0.48
SF3B4-201ENST00000271628 GRAPLQ8TC17 118 aaPredicted RBP18.08■□□□□ 0.48
SF3B4-201ENST00000271628 PDS5AQ29RF7 1337 aaKnown RBP18.08■□□□□ 0.48
SF3B4-201ENST00000271628 PNPLA7Q6ZV29 1317 aa18.08■□□□□ 0.48
SF3B4-201ENST00000271628 A0A0G2JLW4 131 aa18.07■□□□□ 0.48
SF3B4-201ENST00000271628 PRPF40AO75400 957 aaKnown RBP18.07■□□□□ 0.48
SF3B4-201ENST00000271628 HAND2P61296 217 aa18.07■□□□□ 0.48
SF3B4-201ENST00000271628 STK3Q13188 491 aa18.07■□□□□ 0.48
SF3B4-201ENST00000271628 LARP1BQ659C4 914 aaKnown RBP18.07■□□□□ 0.48
SF3B4-201ENST00000271628 ZNF274Q96GC6 653 aaPredicted RBP18.07■□□□□ 0.48
SF3B4-201ENST00000271628 LLPHQ9BRT6 129 aaKnown RBP18.07■□□□□ 0.48
SF3B4-201ENST00000271628 WDR19Q8NEZ3 1342 aa18.07■□□□□ 0.48
SF3B4-201ENST00000271628 PFKFB2O60825 505 aa18.07■□□□□ 0.48
SF3B4-201ENST00000271628 SERPINB2P05120 415 aa18.07■□□□□ 0.48
SF3B4-201ENST00000271628 PROM2Q8N271 834 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms