RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 CELF1Q92879 486 aaKnown RBP27.51■■□□□ 1.99
RAB40B-201ENST00000269347 NBPF3Q9H094 633 aa27.51■■□□□ 1.99
RAB40B-201ENST00000269347 ZNF532Q9HCE3 1301 aa27.51■■□□□ 1.99
RAB40B-201ENST00000269347 COL24A1Q17RW2 1714 aa27.51■■□□□ 1.99
RAB40B-201ENST00000269347 ANKRD1Q15327 319 aa27.5■■□□□ 1.99
RAB40B-201ENST00000269347 L1TD1Q5T7N2 865 aaKnown RBP27.5■■□□□ 1.99
RAB40B-201ENST00000269347 SPATA5Q8NB90 893 aa27.5■■□□□ 1.99
RAB40B-201ENST00000269347 LRRC4BQ9NT99 713 aa27.5■■□□□ 1.99
RAB40B-201ENST00000269347 SLC5A1P13866 664 aa27.5■■□□□ 1.99
RAB40B-201ENST00000269347 PDE6AP16499 860 aa27.5■■□□□ 1.99
RAB40B-201ENST00000269347 IGHMBP2P38935 993 aaKnown RBP27.5■■□□□ 1.99
RAB40B-201ENST00000269347 APOBRQ0VD83 1088 aa27.5■■□□□ 1.99
RAB40B-201ENST00000269347 RC3H1Q5TC82 1133 aaKnown RBP27.5■■□□□ 1.99
RAB40B-201ENST00000269347 DHX32Q7L7V1 743 aaKnown RBP27.5■■□□□ 1.99
RAB40B-201ENST00000269347 USP48Q86UV5 1035 aa27.5■■□□□ 1.99
RAB40B-201ENST00000269347 ARHGEF1Q92888 912 aaKnown RBP27.5■■□□□ 1.99
RAB40B-201ENST00000269347 IQSEC3Q9UPP2 1182 aaPredicted RBP27.5■■□□□ 1.99
RAB40B-201ENST00000269347 SCRN1Q12765 414 aa27.49■■□□□ 1.99
RAB40B-201ENST00000269347 CDC37L1Q7L3B6 337 aa27.49■■□□□ 1.99
RAB40B-201ENST00000269347 SEPT12Q8IYM1 358 aa27.49■■□□□ 1.99
RAB40B-201ENST00000269347 GTF3C6Q969F1 213 aa27.49■■□□□ 1.99
RAB40B-201ENST00000269347 ATRNO75882 1429 aa27.49■■□□□ 1.99
RAB40B-201ENST00000269347 SF3B3Q15393 1217 aaKnown RBP27.48■■□□□ 1.99
RAB40B-201ENST00000269347 ONECUT3O60422 494 aaPredicted RBP27.48■■□□□ 1.99
RAB40B-201ENST00000269347 ZSCAN23Q3MJ62 389 aa27.48■■□□□ 1.99
RAB40B-201ENST00000269347 FAM173BQ6P4H8 233 aa27.48■■□□□ 1.99
RAB40B-201ENST00000269347 AGXT2Q9BYV1 514 aa27.48■■□□□ 1.99
RAB40B-201ENST00000269347 VPS37CA5D8V6 355 aaPredicted RBP27.47■■□□□ 1.99
RAB40B-201ENST00000269347 PPFIA3O75145 1194 aa27.47■■□□□ 1.99
RAB40B-201ENST00000269347 COL1A1P02452 1464 aaPredicted RBP27.46■■□□□ 1.99
RAB40B-201ENST00000269347 UQCRFS1P1P0C7P4 283 aa27.46■■□□□ 1.99
RAB40B-201ENST00000269347 GRPEL1Q9HAV7 217 aa27.46■■□□□ 1.99
RAB40B-201ENST00000269347 PHF14O94880 888 aa27.46■■□□□ 1.99
RAB40B-201ENST00000269347 CTDNEP1O95476 244 aa27.46■■□□□ 1.99
RAB40B-201ENST00000269347 FERMT3Q86UX7 667 aa27.46■■□□□ 1.99
RAB40B-201ENST00000269347 TNRC6CQ9HCJ0 1690 aaKnown RBP27.46■■□□□ 1.99
RAB40B-201ENST00000269347 DNM1Q05193 864 aaKnown RBP27.45■■□□□ 1.99
RAB40B-201ENST00000269347 LARP1BQ659C4 914 aaKnown RBP27.45■■□□□ 1.99
RAB40B-201ENST00000269347 HSP90B1P14625 803 aaKnown RBP27.45■■□□□ 1.98
RAB40B-201ENST00000269347 KLRK1P26718 216 aa27.45■■□□□ 1.98
RAB40B-201ENST00000269347 GYG1P46976 350 aa27.45■■□□□ 1.98
RAB40B-201ENST00000269347 UBE3CQ15386 1083 aa27.45■■□□□ 1.98
RAB40B-201ENST00000269347 SLC10A5Q5PT55 438 aa27.45■■□□□ 1.98
RAB40B-201ENST00000269347 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.45■■□□□ 1.98
RAB40B-201ENST00000269347 ANTXR2P58335 489 aa27.44■■□□□ 1.98
RAB40B-201ENST00000269347 TTF1Q15361 905 aaPredicted RBP27.44■■□□□ 1.98
RAB40B-201ENST00000269347 TPRNQ4KMQ1 711 aa27.44■■□□□ 1.98
RAB40B-201ENST00000269347 NCOA5Q9HCD5 579 aaKnown RBP27.44■■□□□ 1.98
RAB40B-201ENST00000269347 MAGEB6Q8N7X4 407 aa27.43■■□□□ 1.98
RAB40B-201ENST00000269347 RTCBQ9Y3I0 505 aaKnown RBP27.43■■□□□ 1.98
RAB40B-201ENST00000269347 LRRFIP1Q32MZ4 808 aaKnown RBP27.43■■□□□ 1.98
RAB40B-201ENST00000269347 INCENPQ9NQS7 918 aa27.43■■□□□ 1.98
RAB40B-201ENST00000269347 MINPP1Q9UNW1 487 aa27.43■■□□□ 1.98
RAB40B-201ENST00000269347 TACC3Q9Y6A5 838 aa27.43■■□□□ 1.98
RAB40B-201ENST00000269347 BRWD3Q6RI45 1802 aa27.42■■□□□ 1.98
RAB40B-201ENST00000269347 CCT2P78371 535 aaKnown RBP27.42■■□□□ 1.98
RAB40B-201ENST00000269347 TBC1D10CQ8IV04 446 aa27.42■■□□□ 1.98
RAB40B-201ENST00000269347 ANKRD18AQ8IVF6 992 aa27.42■■□□□ 1.98
RAB40B-201ENST00000269347 DDX11Q96FC9 970 aa27.42■■□□□ 1.98
RAB40B-201ENST00000269347 CDC5LQ99459 802 aaKnown RBP27.42■■□□□ 1.98
RAB40B-201ENST00000269347 FAM196AQ6ZSG2 479 aa27.42■■□□□ 1.98
RAB40B-201ENST00000269347 MB21D2Q8IYB1 491 aaPredicted RBP27.42■■□□□ 1.98
RAB40B-201ENST00000269347 STRBPQ96SI9 672 aaKnown RBP27.42■■□□□ 1.98
RAB40B-201ENST00000269347 SETDB2Q96T68 719 aa27.42■■□□□ 1.98
RAB40B-201ENST00000269347 EPB41L4AQ9HCS5 686 aaPredicted RBP27.42■■□□□ 1.98
RAB40B-201ENST00000269347 PFKFB2O60825 505 aa27.41■■□□□ 1.98
RAB40B-201ENST00000269347 ZPR1O75312 459 aa27.41■■□□□ 1.98
RAB40B-201ENST00000269347 HMGB1P09429 215 aaKnown RBP27.41■■□□□ 1.98
RAB40B-201ENST00000269347 GTF2E1P29083 439 aaPredicted RBP27.41■■□□□ 1.98
RAB40B-201ENST00000269347 NBPF5PQ86XG9 351 aaPredicted RBP27.41■■□□□ 1.98
RAB40B-201ENST00000269347 BSDC1Q9NW68 430 aaPredicted RBP27.41■■□□□ 1.98
RAB40B-201ENST00000269347 FIBPO43427 364 aa27.4■■□□□ 1.98
RAB40B-201ENST00000269347 ZNF445P59923 1031 aa27.4■■□□□ 1.98
RAB40B-201ENST00000269347 IMMTQ16891 758 aaKnown RBP27.4■■□□□ 1.98
RAB40B-201ENST00000269347 ADGRA1Q86SQ6 560 aa27.4■■□□□ 1.98
RAB40B-201ENST00000269347 TMEM87AQ8NBN3 555 aa27.4■■□□□ 1.98
RAB40B-201ENST00000269347 RTN4Q9NQC3 1192 aaKnown RBP27.4■■□□□ 1.98
RAB40B-201ENST00000269347 PRKAB2O43741 272 aa27.39■■□□□ 1.98
RAB40B-201ENST00000269347 TM4SF1P30408 202 aa27.39■■□□□ 1.98
RAB40B-201ENST00000269347 MRE11P49959 708 aa27.39■■□□□ 1.98
RAB40B-201ENST00000269347 FGD1P98174 961 aa27.39■■□□□ 1.98
RAB40B-201ENST00000269347 NSUN7Q8NE18 718 aaKnown RBP27.39■■□□□ 1.98
RAB40B-201ENST00000269347 ARMT1Q9H993 441 aa27.39■■□□□ 1.98
RAB40B-201ENST00000269347 TRPC5Q9UL62 973 aaPredicted RBP27.39■■□□□ 1.98
RAB40B-201ENST00000269347 PDIA3P30101 505 aaKnown RBP27.39■■□□□ 1.97
RAB40B-201ENST00000269347 ZSCAN25Q6NSZ9 544 aa27.39■■□□□ 1.97
RAB40B-201ENST00000269347 ZNF804BA4D1E1 1349 aa27.39■■□□□ 1.97
RAB40B-201ENST00000269347 RAB11FIP4Q86YS3 637 aa27.38■■□□□ 1.97
RAB40B-201ENST00000269347 SMARCC2Q8TAQ2 1214 aa27.38■■□□□ 1.97
RAB40B-201ENST00000269347 CTNNA3Q9UI47 895 aa27.38■■□□□ 1.97
RAB40B-201ENST00000269347 MBD4O95243 580 aa27.38■■□□□ 1.97
RAB40B-201ENST00000269347 QTRT2Q9H974 415 aaKnown RBP27.38■■□□□ 1.97
RAB40B-201ENST00000269347 UBR3Q6ZT12 1888 aa27.37■■□□□ 1.97
RAB40B-201ENST00000269347 SYCE3A1L190 88 aa27.36■■□□□ 1.97
RAB40B-201ENST00000269347 ZNF213O14771 459 aa27.36■■□□□ 1.97
RAB40B-201ENST00000269347 LCORLQ8N3X6 602 aa27.36■■□□□ 1.97
RAB40B-201ENST00000269347 FOSBP53539 338 aa27.36■■□□□ 1.97
RAB40B-201ENST00000269347 CYB5R4Q7L1T6 521 aa27.36■■□□□ 1.97
RAB40B-201ENST00000269347 SENP2Q9HC62 589 aa27.36■■□□□ 1.97
RAB40B-201ENST00000269347 RGL2O15211 777 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms