RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 SNX14Q9Y5W7 946 aa18.43■□□□□ 0.54
COPS3-201ENST00000268717 TIAM2Q8IVF5 1701 aa18.43■□□□□ 0.54
COPS3-201ENST00000268717 LTBP3Q9NS15 1303 aa18.43■□□□□ 0.54
COPS3-201ENST00000268717 ZBTB22O15209 634 aa18.42■□□□□ 0.54
COPS3-201ENST00000268717 MCAMP43121 646 aa18.42■□□□□ 0.54
COPS3-201ENST00000268717 RNF20Q5VTR2 975 aa18.42■□□□□ 0.54
COPS3-201ENST00000268717 RBM17Q96I25 401 aaKnown RBP18.42■□□□□ 0.54
COPS3-201ENST00000268717 CRAMP1Q96RY5 1269 aa18.42■□□□□ 0.54
COPS3-201ENST00000268717 GPBP1L1Q9HC44 474 aaPredicted RBP18.42■□□□□ 0.54
COPS3-201ENST00000268717 HMG20BQ9P0W2 317 aa18.42■□□□□ 0.54
COPS3-201ENST00000268717 ZKSCAN1P17029 563 aaPredicted RBP18.41■□□□□ 0.54
COPS3-201ENST00000268717 RPS8P62241 208 aaKnown RBP18.41■□□□□ 0.54
COPS3-201ENST00000268717 FKBP4Q02790 459 aaKnown RBP eCLIP18.41■□□□□ 0.54
COPS3-201ENST00000268717 SCARF1Q14162 830 aa18.41■□□□□ 0.54
COPS3-201ENST00000268717 CCDC93Q567U6 631 aa18.41■□□□□ 0.54
COPS3-201ENST00000268717 ZSCAN25Q6NSZ9 544 aa18.41■□□□□ 0.54
COPS3-201ENST00000268717 ZNF589Q86UQ0 364 aaPredicted RBP18.41■□□□□ 0.54
COPS3-201ENST00000268717 HELBQ8NG08 1087 aaPredicted RBP18.41■□□□□ 0.54
COPS3-201ENST00000268717 ZNF526Q8TF50 670 aaPredicted RBP18.41■□□□□ 0.54
COPS3-201ENST00000268717 TAOK3Q9H2K8 898 aa18.41■□□□□ 0.54
COPS3-201ENST00000268717 CIZ1Q9ULV3 898 aaPredicted RBP18.41■□□□□ 0.54
COPS3-201ENST00000268717 RBM8AQ9Y5S9 174 aaKnown RBP18.41■□□□□ 0.54
COPS3-201ENST00000268717 DDIT3P35638 169 aa18.41■□□□□ 0.54
COPS3-201ENST00000268717 ZAP70P43403 619 aa18.41■□□□□ 0.54
COPS3-201ENST00000268717 NEK4P51957 841 aa18.41■□□□□ 0.54
COPS3-201ENST00000268717 TSGA10IPQ3SY00 556 aa18.41■□□□□ 0.54
COPS3-201ENST00000268717 OLFM4Q6UX06 510 aa18.41■□□□□ 0.54
COPS3-201ENST00000268717 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.41■□□□□ 0.54
COPS3-201ENST00000268717 ZC3H4Q9UPT8 1303 aaKnown RBP18.4■□□□□ 0.54
COPS3-201ENST00000268717 PHKA1P46020 1223 aa18.4■□□□□ 0.54
COPS3-201ENST00000268717 CELF1Q92879 486 aaKnown RBP18.4■□□□□ 0.54
COPS3-201ENST00000268717 ANKRD2Q9GZV1 360 aa18.4■□□□□ 0.54
COPS3-201ENST00000268717 MINPP1Q9UNW1 487 aa18.4■□□□□ 0.54
COPS3-201ENST00000268717 U3KPZ7 1027 aaPredicted RBP18.4■□□□□ 0.54
COPS3-201ENST00000268717 SNED1Q8TER0 1413 aa18.39■□□□□ 0.53
COPS3-201ENST00000268717 ZNF804BA4D1E1 1349 aa18.39■□□□□ 0.53
COPS3-201ENST00000268717 CREB3L3Q68CJ9 461 aa18.39■□□□□ 0.53
COPS3-201ENST00000268717 RASEFQ8IZ41 740 aa18.39■□□□□ 0.53
COPS3-201ENST00000268717 DSCC1Q9BVC3 393 aa18.39■□□□□ 0.53
COPS3-201ENST00000268717 SLKQ9H2G2 1235 aaPredicted RBP18.39■□□□□ 0.53
COPS3-201ENST00000268717 CHMP5Q9NZZ3 219 aa18.39■□□□□ 0.53
COPS3-201ENST00000268717 KCNJ4P48050 445 aa18.38■□□□□ 0.53
COPS3-201ENST00000268717 RTKN2Q8IZC4 609 aa18.38■□□□□ 0.53
COPS3-201ENST00000268717 A0A1B0GUL6 1792 aa18.38■□□□□ 0.53
COPS3-201ENST00000268717 AKAP11Q9UKA4 1901 aa18.38■□□□□ 0.53
COPS3-201ENST00000268717 SNAP23O00161 211 aa18.38■□□□□ 0.53
COPS3-201ENST00000268717 PPEF1O14829 653 aaPredicted RBP18.38■□□□□ 0.53
COPS3-201ENST00000268717 CC2D2BQ6DHV5 1058 aa18.38■□□□□ 0.53
COPS3-201ENST00000268717 APPBP2Q92624 585 aa18.38■□□□□ 0.53
COPS3-201ENST00000268717 RPAP1Q9BWH6 1393 aaPredicted RBP18.37■□□□□ 0.53
COPS3-201ENST00000268717 MAST3O60307 1309 aa18.37■□□□□ 0.53
COPS3-201ENST00000268717 SLC27A2O14975 620 aa18.37■□□□□ 0.53
COPS3-201ENST00000268717 CYP2E1P05181 493 aaPredicted RBP18.37■□□□□ 0.53
COPS3-201ENST00000268717 PSMA5P28066 241 aa18.37■□□□□ 0.53
COPS3-201ENST00000268717 GRAPQ13588 217 aa18.37■□□□□ 0.53
COPS3-201ENST00000268717 KRT32Q14532 448 aa18.37■□□□□ 0.53
COPS3-201ENST00000268717 UBE3CQ15386 1083 aa18.37■□□□□ 0.53
COPS3-201ENST00000268717 SPATA5Q8NB90 893 aa18.37■□□□□ 0.53
COPS3-201ENST00000268717 GRAPLQ8TC17 118 aaPredicted RBP18.37■□□□□ 0.53
COPS3-201ENST00000268717 CHGBP05060 677 aa18.36■□□□□ 0.53
COPS3-201ENST00000268717 HSP90AA1P07900 732 aaKnown RBP18.36■□□□□ 0.53
COPS3-201ENST00000268717 TTC14Q96N46 770 aa18.36■□□□□ 0.53
COPS3-201ENST00000268717 ZSWIM6Q9HCJ5 1215 aa18.36■□□□□ 0.53
COPS3-201ENST00000268717 GNL3LQ9NVN8 582 aaKnown RBP18.36■□□□□ 0.53
COPS3-201ENST00000268717 ADD2P35612 726 aa18.35■□□□□ 0.53
COPS3-201ENST00000268717 RASGRF1Q13972 1273 aa18.35■□□□□ 0.53
COPS3-201ENST00000268717 SEC62Q99442 399 aaKnown RBP18.35■□□□□ 0.53
COPS3-201ENST00000268717 PDS5AQ29RF7 1337 aaKnown RBP18.35■□□□□ 0.53
COPS3-201ENST00000268717 SEMA3EO15041 775 aa18.34■□□□□ 0.53
COPS3-201ENST00000268717 BBOX1O75936 387 aa18.34■□□□□ 0.53
COPS3-201ENST00000268717 GRIPAP1Q4V328 841 aa18.34■□□□□ 0.53
COPS3-201ENST00000268717 VPS53Q5VIR6 699 aa18.34■□□□□ 0.53
COPS3-201ENST00000268717 PI16Q6UXB8 463 aa18.34■□□□□ 0.53
COPS3-201ENST00000268717 SLC51AQ86UW1 340 aa18.34■□□□□ 0.53
COPS3-201ENST00000268717 OSBP2Q969R2 916 aa18.34■□□□□ 0.53
COPS3-201ENST00000268717 PSMD1Q99460 953 aa18.34■□□□□ 0.53
COPS3-201ENST00000268717 CWC22Q9HCG8 908 aaKnown RBP18.34■□□□□ 0.53
COPS3-201ENST00000268717 CUL4AQ13619 759 aa18.34■□□□□ 0.53
COPS3-201ENST00000268717 CAVIN4Q5BKX8 364 aa18.34■□□□□ 0.53
COPS3-201ENST00000268717 CCDC129Q6ZRS4 1044 aa18.34■□□□□ 0.53
COPS3-201ENST00000268717 UPF3BQ9BZI7 483 aaKnown RBP18.34■□□□□ 0.53
COPS3-201ENST00000268717 ALDH8A1Q9H2A2 487 aaPredicted RBP18.34■□□□□ 0.53
COPS3-201ENST00000268717 ATP6V0A2Q9Y487 856 aa18.34■□□□□ 0.53
COPS3-201ENST00000268717 CYP46A1Q9Y6A2 500 aa18.34■□□□□ 0.53
COPS3-201ENST00000268717 LRRC37AA6NMS7 1700 aa18.33■□□□□ 0.53
COPS3-201ENST00000268717 BCAMP50895 628 aa18.33■□□□□ 0.52
COPS3-201ENST00000268717 INTS4Q96HW7 963 aaKnown RBP18.33■□□□□ 0.52
COPS3-201ENST00000268717 PIH1D3Q9NQM4 214 aaKnown RBP18.33■□□□□ 0.52
COPS3-201ENST00000268717 ZNF277Q9NRM2 450 aaPredicted RBP18.33■□□□□ 0.52
COPS3-201ENST00000268717 GLTPD2A6NH11 291 aa18.32■□□□□ 0.52
COPS3-201ENST00000268717 KIF3CO14782 793 aa18.32■□□□□ 0.52
COPS3-201ENST00000268717 IGSF3O75054 1194 aa18.32■□□□□ 0.52
COPS3-201ENST00000268717 HSPD1P10809 573 aaKnown RBP18.32■□□□□ 0.52
COPS3-201ENST00000268717 CASTP20810 708 aaKnown RBP18.32■□□□□ 0.52
COPS3-201ENST00000268717 MAP3K12Q12852 859 aa18.32■□□□□ 0.52
COPS3-201ENST00000268717 RUFY3Q7L099 469 aa18.32■□□□□ 0.52
COPS3-201ENST00000268717 FBXO33Q7Z6M2 555 aa18.32■□□□□ 0.52
COPS3-201ENST00000268717 TMX3Q96JJ7 454 aa18.32■□□□□ 0.52
COPS3-201ENST00000268717 JAKMIP1Q96N16 626 aaKnown RBP18.32■□□□□ 0.52
COPS3-201ENST00000268717 NMRK2Q9NPI5 230 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms