RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 ONECUT3O60422 494 aaPredicted RBP18.69■□□□□ 0.58
MAP1LC3B-201ENST00000268607 IL6STP40189 918 aaPredicted RBP18.69■□□□□ 0.58
MAP1LC3B-201ENST00000268607 ZNF75DP51815 510 aa18.69■□□□□ 0.58
MAP1LC3B-201ENST00000268607 FERMT3Q86UX7 667 aa18.69■□□□□ 0.58
MAP1LC3B-201ENST00000268607 CACTINQ8WUQ7 758 aaKnown RBP18.69■□□□□ 0.58
MAP1LC3B-201ENST00000268607 ISCA1Q9BUE6 129 aa18.69■□□□□ 0.58
MAP1LC3B-201ENST00000268607 TRMT112Q9UI30 125 aaKnown RBP18.69■□□□□ 0.58
MAP1LC3B-201ENST00000268607 GNPATO15228 680 aa18.69■□□□□ 0.58
MAP1LC3B-201ENST00000268607 NLRP10Q86W26 655 aa18.69■□□□□ 0.58
MAP1LC3B-201ENST00000268607 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.69■□□□□ 0.58
MAP1LC3B-201ENST00000268607 V9GYY5 206 aaPredicted RBP18.69■□□□□ 0.58
MAP1LC3B-201ENST00000268607 TIMM10P62072 90 aa18.68■□□□□ 0.58
MAP1LC3B-201ENST00000268607 CCDC191Q8NCU4 936 aa18.68■□□□□ 0.58
MAP1LC3B-201ENST00000268607 PUS3Q9BZE2 481 aaKnown RBP18.68■□□□□ 0.58
MAP1LC3B-201ENST00000268607 TNMDQ9H2S6 317 aa18.68■□□□□ 0.58
MAP1LC3B-201ENST00000268607 NECTIN1Q15223 517 aa18.68■□□□□ 0.58
MAP1LC3B-201ENST00000268607 SLFNL1Q499Z3 407 aa18.68■□□□□ 0.58
MAP1LC3B-201ENST00000268607 PLA2G4DQ86XP0 818 aa18.68■□□□□ 0.58
MAP1LC3B-201ENST00000268607 SMARCC1Q92922 1105 aaPredicted RBP18.68■□□□□ 0.58
MAP1LC3B-201ENST00000268607 DACT1Q9NYF0 836 aa18.68■□□□□ 0.58
MAP1LC3B-201ENST00000268607 TJP1Q07157 1748 aa18.68■□□□□ 0.58
MAP1LC3B-201ENST00000268607 CCDC144BQ3MJ40 725 aa18.67■□□□□ 0.58
MAP1LC3B-201ENST00000268607 CEP135Q66GS9 1140 aa18.67■□□□□ 0.58
MAP1LC3B-201ENST00000268607 CREB3L3Q68CJ9 461 aa18.67■□□□□ 0.58
MAP1LC3B-201ENST00000268607 DDX46Q7L014 1031 aaKnown RBP18.67■□□□□ 0.58
MAP1LC3B-201ENST00000268607 CCDC144CPQ8IYA2 1237 aa18.67■□□□□ 0.58
MAP1LC3B-201ENST00000268607 NECAB1Q8N987 351 aa18.67■□□□□ 0.58
MAP1LC3B-201ENST00000268607 ST3GAL1Q11201 340 aa18.67■□□□□ 0.58
MAP1LC3B-201ENST00000268607 LRRC24Q50LG9 513 aa18.67■□□□□ 0.58
MAP1LC3B-201ENST00000268607 SEC62Q99442 399 aaKnown RBP18.67■□□□□ 0.58
MAP1LC3B-201ENST00000268607 PDRG1Q9NUG6 133 aa18.67■□□□□ 0.58
MAP1LC3B-201ENST00000268607 CLIP2Q9UDT6 1046 aa18.67■□□□□ 0.58
MAP1LC3B-201ENST00000268607 KRT85P78386 507 aa18.67■□□□□ 0.58
MAP1LC3B-201ENST00000268607 SUSD4Q5VX71 490 aa18.67■□□□□ 0.58
MAP1LC3B-201ENST00000268607 CCDC129Q6ZRS4 1044 aa18.67■□□□□ 0.58
MAP1LC3B-201ENST00000268607 RGS17Q9UGC6 210 aaPredicted RBP18.66■□□□□ 0.58
MAP1LC3B-201ENST00000268607 NIP7Q9Y221 180 aaKnown RBP eCLIP18.66■□□□□ 0.58
MAP1LC3B-201ENST00000268607 USP27XA6NNY8 438 aa18.66■□□□□ 0.58
MAP1LC3B-201ENST00000268607 IRX3P78415 501 aaPredicted RBP18.66■□□□□ 0.58
MAP1LC3B-201ENST00000268607 MAP4K1Q92918 833 aa18.66■□□□□ 0.58
MAP1LC3B-201ENST00000268607 ZNF215Q9UL58 517 aaPredicted RBP18.66■□□□□ 0.58
MAP1LC3B-201ENST00000268607 CAMTA2O94983 1202 aa18.65■□□□□ 0.58
MAP1LC3B-201ENST00000268607 ZKSCAN1P17029 563 aaPredicted RBP18.65■□□□□ 0.58
MAP1LC3B-201ENST00000268607 RBM6P78332 1123 aaKnown RBP18.65■□□□□ 0.58
MAP1LC3B-201ENST00000268607 ME3Q16798 604 aa18.65■□□□□ 0.58
MAP1LC3B-201ENST00000268607 LARP1BQ659C4 914 aaKnown RBP18.65■□□□□ 0.58
MAP1LC3B-201ENST00000268607 CDC37L1Q7L3B6 337 aa18.65■□□□□ 0.58
MAP1LC3B-201ENST00000268607 CYP46A1Q9Y6A2 500 aa18.65■□□□□ 0.58
MAP1LC3B-201ENST00000268607 POTEAQ6S8J7 498 aa18.65■□□□□ 0.58
MAP1LC3B-201ENST00000268607 ATG9AQ7Z3C6 839 aa18.65■□□□□ 0.58
MAP1LC3B-201ENST00000268607 ZNF397Q8NF99 534 aaPredicted RBP18.65■□□□□ 0.58
MAP1LC3B-201ENST00000268607 THSD7AQ9UPZ6 1657 aa18.64■□□□□ 0.58
MAP1LC3B-201ENST00000268607 SLC27A2O14975 620 aa18.64■□□□□ 0.57
MAP1LC3B-201ENST00000268607 ATP5JP18859 108 aa18.64■□□□□ 0.57
MAP1LC3B-201ENST00000268607 ARID5BQ14865 1188 aa18.64■□□□□ 0.57
MAP1LC3B-201ENST00000268607 USPL1Q5W0Q7 1092 aa18.64■□□□□ 0.57
MAP1LC3B-201ENST00000268607 DNAJC25Q9H1X3 360 aa18.64■□□□□ 0.57
MAP1LC3B-201ENST00000268607 HNRNPH2P55795 449 aaKnown RBP18.64■□□□□ 0.57
MAP1LC3B-201ENST00000268607 FAM196AQ6ZSG2 479 aa18.64■□□□□ 0.57
MAP1LC3B-201ENST00000268607 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.64■□□□□ 0.57
MAP1LC3B-201ENST00000268607 TFIP11Q9UBB9 837 aaKnown RBP18.64■□□□□ 0.57
MAP1LC3B-201ENST00000268607 BTAF1O14981 1849 aa18.63■□□□□ 0.57
MAP1LC3B-201ENST00000268607 COL15A1P39059 1388 aa18.63■□□□□ 0.57
MAP1LC3B-201ENST00000268607 HIP1O00291 1037 aa18.63■□□□□ 0.57
MAP1LC3B-201ENST00000268607 ZNF165P49910 485 aa18.63■□□□□ 0.57
MAP1LC3B-201ENST00000268607 FBXO38Q6PIJ6 1188 aa18.63■□□□□ 0.57
MAP1LC3B-201ENST00000268607 ZBTB9Q96C00 473 aa18.63■□□□□ 0.57
MAP1LC3B-201ENST00000268607 GREM2Q9H772 168 aa18.63■□□□□ 0.57
MAP1LC3B-201ENST00000268607 ZSWIM6Q9HCJ5 1215 aa18.63■□□□□ 0.57
MAP1LC3B-201ENST00000268607 NUP188Q5SRE5 1749 aa18.63■□□□□ 0.57
MAP1LC3B-201ENST00000268607 GOLGA6L4A6NEF3 574 aa18.63■□□□□ 0.57
MAP1LC3B-201ENST00000268607 IRS4O14654 1257 aaPredicted RBP18.63■□□□□ 0.57
MAP1LC3B-201ENST00000268607 VPS53Q5VIR6 699 aa18.63■□□□□ 0.57
MAP1LC3B-201ENST00000268607 TDRD7Q8NHU6 1098 aaKnown RBP18.63■□□□□ 0.57
MAP1LC3B-201ENST00000268607 FAM53CQ9NYF3 392 aa18.63■□□□□ 0.57
MAP1LC3B-201ENST00000268607 ZBTB38Q8NAP3 1195 aaPredicted RBP18.62■□□□□ 0.57
MAP1LC3B-201ENST00000268607 ZSCAN31Q96LW9 406 aaPredicted RBP18.62■□□□□ 0.57
MAP1LC3B-201ENST00000268607 FEZ2Q9UHY8 353 aaPredicted RBP18.62■□□□□ 0.57
MAP1LC3B-201ENST00000268607 SNAP23O00161 211 aa18.62■□□□□ 0.57
MAP1LC3B-201ENST00000268607 SH2B1Q9NRF2 756 aaPredicted RBP18.62■□□□□ 0.57
MAP1LC3B-201ENST00000268607 BRWD3Q6RI45 1802 aa18.61■□□□□ 0.57
MAP1LC3B-201ENST00000268607 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.61■□□□□ 0.57
MAP1LC3B-201ENST00000268607 GOLIM4O00461 696 aa18.61■□□□□ 0.57
MAP1LC3B-201ENST00000268607 ELF2Q15723 593 aa18.61■□□□□ 0.57
MAP1LC3B-201ENST00000268607 ZFP91Q96JP5 570 aaPredicted RBP18.61■□□□□ 0.57
MAP1LC3B-201ENST00000268607 TAF5LO75529 589 aa18.61■□□□□ 0.57
MAP1LC3B-201ENST00000268607 LRRC8AQ8IWT6 810 aa18.61■□□□□ 0.57
MAP1LC3B-201ENST00000268607 ARHGEF1Q92888 912 aaKnown RBP18.61■□□□□ 0.57
MAP1LC3B-201ENST00000268607 TPCN1Q9ULQ1 816 aa18.61■□□□□ 0.57
MAP1LC3B-201ENST00000268607 PTPN14Q15678 1187 aa18.6■□□□□ 0.57
MAP1LC3B-201ENST00000268607 TBC1D9BQ66K14 1250 aa18.6■□□□□ 0.57
MAP1LC3B-201ENST00000268607 ZNF34Q8IZ26 560 aa18.6■□□□□ 0.57
MAP1LC3B-201ENST00000268607 PROM2Q8N271 834 aa18.6■□□□□ 0.57
MAP1LC3B-201ENST00000268607 SPATA32Q96LK8 384 aa18.6■□□□□ 0.57
MAP1LC3B-201ENST00000268607 ELP1O95163 1332 aa18.6■□□□□ 0.57
MAP1LC3B-201ENST00000268607 NPHP1O15259 732 aa18.6■□□□□ 0.57
MAP1LC3B-201ENST00000268607 NR1I2O75469 434 aa18.6■□□□□ 0.57
MAP1LC3B-201ENST00000268607 NUP98P52948 1817 aa18.59■□□□□ 0.57
MAP1LC3B-201ENST00000268607 PCCAP05165 728 aaPredicted RBP18.59■□□□□ 0.57
MAP1LC3B-201ENST00000268607 RXRBP28702 533 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms