RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 Q9H521 79 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 PRDM11Q9NQV5 511 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 GOLGA6CA6NDK9 693 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 GOLGA6DP0CG33 693 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 ISM2Q6H9L7 571 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 GOLGA6AQ9NYA3 693 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 PPFIA1Q13136 1202 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 C6orf50Q9HD87 102 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 CABP1Q9NZU7 370 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 THEGQ9P2T0 379 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 ATAD2BQ9ULI0 1458 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 ERCC5P28715 1186 aaPredicted RBP13.59□□□□□ -0.23
SRRM4-201ENST00000267260 TRIM14Q14142 442 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 UBXN1Q04323 297 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 ITIH3Q06033 890 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 MUM1Q2TAK8 710 aa13.59□□□□□ -0.23
SRRM4-201ENST00000267260 VWA3BQ502W6 1294 aa13.58□□□□□ -0.23
SRRM4-201ENST00000267260 GTF3C6Q969F1 213 aa13.58□□□□□ -0.23
SRRM4-201ENST00000267260 FAN1Q9Y2M0 1017 aa13.58□□□□□ -0.23
SRRM4-201ENST00000267260 PTGS1P23219 599 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 DACT3Q96B18 629 aaPredicted RBP13.58□□□□□ -0.24
SRRM4-201ENST00000267260 AGTPBP1Q9UPW5 1226 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 FRMD4BQ9Y2L6 1034 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 TMEM110-MUSTN1A8MSY1 372 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 RHOXF2BP0C7M4 288 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 HPDP32754 393 aaPredicted RBP13.58□□□□□ -0.24
SRRM4-201ENST00000267260 POGZQ7Z3K3 1410 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 BANK1Q8NDB2 785 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 RHOXF2Q9BQY4 288 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 HAUS8Q9BT25 410 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 TRIM4Q9C037 500 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 TBC1D9Q6ZT07 1266 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 MRPS27Q92552 414 aaKnown RBP13.58□□□□□ -0.24
SRRM4-201ENST00000267260 TFIP11Q9UBB9 837 aaKnown RBP13.58□□□□□ -0.24
SRRM4-201ENST00000267260 ZBTB43O43298 467 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 TXNDC9O14530 226 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 TSPY3P0CV98 308 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 TSPY8P0CW00 308 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 RTN1Q16799 776 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 ATL3Q6DD88 541 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 UBL4BQ8N7F7 174 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 MYD88Q99836 296 aa13.58□□□□□ -0.24
SRRM4-201ENST00000267260 XAB2Q9HCS7 855 aaKnown RBP13.58□□□□□ -0.24
SRRM4-201ENST00000267260 INPP1P49441 399 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 RTL9Q8NET4 1388 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 TLDC2A0PJX2 215 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 E7EVH7 732 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 HS2ST1Q7LGA3 356 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 RAD54L2Q9Y4B4 1467 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 I3L4J1 428 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 MAP3K7CLP57077 242 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 CC2D2AQ9P2K1 1620 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 PFDN1O60925 122 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 NAA16Q6N069 864 aaPredicted RBP13.57□□□□□ -0.24
SRRM4-201ENST00000267260 GIMAP6Q6P9H5 292 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 IFT20Q8IY31 132 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 ECHDC1Q9NTX5 307 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 DBF4Q9UBU7 674 aaPredicted RBP13.57□□□□□ -0.24
SRRM4-201ENST00000267260 CFAP70Q5T0N1 1121 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 ESR2Q92731 530 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 SLC12A5Q9H2X9 1139 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 MYCNP04198 464 aaPredicted RBP13.57□□□□□ -0.24
SRRM4-201ENST00000267260 FAM69CQ0P6D2 419 aa13.57□□□□□ -0.24
SRRM4-201ENST00000267260 TEX13AQ9BXU3 409 aaPredicted RBP13.56□□□□□ -0.24
SRRM4-201ENST00000267260 RPL13P26373 211 aaKnown RBP13.56□□□□□ -0.24
SRRM4-201ENST00000267260 AFMP43652 599 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 RUFY4Q6ZNE9 571 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 SLC8A3P57103 927 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 SLC4A8Q2Y0W8 1093 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 RILPL1Q5EBL4 403 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 ZNF830Q96NB3 372 aaPredicted RBP13.56□□□□□ -0.24
SRRM4-201ENST00000267260 EIF2AQ9BY44 585 aaKnown RBP13.56□□□□□ -0.24
SRRM4-201ENST00000267260 GUCA1BQ9UMX6 200 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 SPDYE3A6NKU9 549 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 SMIM24O75264 130 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 TERF1P54274 439 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 CUL4BQ13620 913 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 SMARCC2Q8TAQ2 1214 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 CFTRP13569 1480 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 ATP6V1AP38606 617 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 ASIC1P78348 528 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 PPP2R3AQ06190 1150 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 PSMD6Q15008 389 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 RPAINQ86UA6 219 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 MICAL1Q8TDZ2 1067 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 ATP2A3Q93084 1043 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 ALG1Q9BT22 464 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 PIK3R4Q99570 1358 aa13.56□□□□□ -0.24
SRRM4-201ENST00000267260 SMARCA5O60264 1052 aaPredicted RBP13.55□□□□□ -0.24
SRRM4-201ENST00000267260 CALM1P0DP23 149 aa13.55□□□□□ -0.24
SRRM4-201ENST00000267260 CALM2P0DP24 149 aa13.55□□□□□ -0.24
SRRM4-201ENST00000267260 CALM3P0DP25 149 aa13.55□□□□□ -0.24
SRRM4-201ENST00000267260 HAUS7Q99871 368 aa13.55□□□□□ -0.24
SRRM4-201ENST00000267260 SLC8A1P32418 973 aa13.55□□□□□ -0.24
SRRM4-201ENST00000267260 DIXDC1Q155Q3 683 aa13.55□□□□□ -0.24
SRRM4-201ENST00000267260 PDCD2Q16342 344 aaPredicted RBP13.55□□□□□ -0.24
SRRM4-201ENST00000267260 ZNF569Q5MCW4 686 aa13.55□□□□□ -0.24
SRRM4-201ENST00000267260 CCDC186Q7Z3E2 898 aa13.55□□□□□ -0.24
SRRM4-201ENST00000267260 FAF1Q9UNN5 650 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms