RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 PHLPP2Q6ZVD8 1323 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 NPHP3Q7Z494 1330 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 SGSM2O43147 1006 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 RPS6KA5O75582 802 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 ADAMTS2O95450 1211 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 STK3Q13188 491 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 TOM1L2Q6ZVM7 507 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 FMNL2Q96PY5 1086 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 CEP89Q96ST8 783 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 IRX2Q9BZI1 471 aaPredicted RBP10.15□□□□□ -0.78
VAPB-201ENST00000265619 EHD4Q9H223 541 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 SLAIN2Q9P270 581 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 A0A0U1RQJ8 604 aa10.15□□□□□ -0.79
VAPB-201ENST00000265619 KCNQ3O43525 872 aa10.15□□□□□ -0.79
VAPB-201ENST00000265619 FOSBP53539 338 aa10.15□□□□□ -0.79
VAPB-201ENST00000265619 PPP2R3AQ06190 1150 aa10.15□□□□□ -0.79
VAPB-201ENST00000265619 MAP9Q49MG5 647 aa10.15□□□□□ -0.79
VAPB-201ENST00000265619 PRPF40BQ6NWY9 871 aaKnown RBP10.15□□□□□ -0.79
VAPB-201ENST00000265619 ATRIPQ8WXE1 791 aa10.15□□□□□ -0.79
VAPB-201ENST00000265619 IP6K1Q92551 441 aa10.15□□□□□ -0.79
VAPB-201ENST00000265619 UTP14AQ9BVJ6 771 aaKnown RBP10.15□□□□□ -0.79
VAPB-201ENST00000265619 LRRCC1Q9C099 1032 aa10.15□□□□□ -0.79
VAPB-201ENST00000265619 NALCNQ8IZF0 1738 aa10.14□□□□□ -0.79
VAPB-201ENST00000265619 EXOC5O00471 708 aa10.14□□□□□ -0.79
VAPB-201ENST00000265619 IBSPP21815 317 aaPredicted RBP10.14□□□□□ -0.79
VAPB-201ENST00000265619 SLC39A6Q13433 755 aa10.14□□□□□ -0.79
VAPB-201ENST00000265619 BEND6Q5SZJ8 279 aaPredicted RBP10.14□□□□□ -0.79
VAPB-201ENST00000265619 GPR161Q8N6U8 529 aaKnown RBP10.14□□□□□ -0.79
VAPB-201ENST00000265619 DHX58Q96C10 678 aa10.14□□□□□ -0.79
VAPB-201ENST00000265619 ANKZF1Q9H8Y5 726 aa10.14□□□□□ -0.79
VAPB-201ENST00000265619 AIMP1Q12904 312 aaKnown RBP10.14□□□□□ -0.79
VAPB-201ENST00000265619 DNAAF4Q8WXU2 420 aa10.14□□□□□ -0.79
VAPB-201ENST00000265619 DPF2Q92785 391 aa10.14□□□□□ -0.79
VAPB-201ENST00000265619 STK31Q9BXU1 1019 aa10.14□□□□□ -0.79
VAPB-201ENST00000265619 SLC24A3Q9HC58 644 aa10.14□□□□□ -0.79
VAPB-201ENST00000265619 RAI14Q9P0K7 980 aa10.14□□□□□ -0.79
VAPB-201ENST00000265619 JAK2O60674 1132 aa10.14□□□□□ -0.79
VAPB-201ENST00000265619 PPFIA3O75145 1194 aa10.14□□□□□ -0.79
VAPB-201ENST00000265619 SFPQP23246 707 aaKnown RBP eCLIP10.14□□□□□ -0.792e-8■□□□□ 10.1
VAPB-201ENST00000265619 TTC19Q6DKK2 380 aaPredicted RBP10.14□□□□□ -0.79
VAPB-201ENST00000265619 TTC41PQ6P2S7 1318 aa10.13□□□□□ -0.79
VAPB-201ENST00000265619 KIF24Q5T7B8 1368 aa10.13□□□□□ -0.79
VAPB-201ENST00000265619 ATP1A3P13637 1013 aa10.13□□□□□ -0.79
VAPB-201ENST00000265619 STX1AQ16623 288 aa10.13□□□□□ -0.79
VAPB-201ENST00000265619 DPCR1Q3MIW9 517 aa10.13□□□□□ -0.79
VAPB-201ENST00000265619 JPH2Q9BR39 696 aaPredicted RBP10.13□□□□□ -0.79
VAPB-201ENST00000265619 MRFAP1Q9Y605 127 aa10.13□□□□□ -0.79
VAPB-201ENST00000265619 GOLIM4O00461 696 aa10.13□□□□□ -0.79
VAPB-201ENST00000265619 MAP3K9P80192 1104 aa10.13□□□□□ -0.79
VAPB-201ENST00000265619 BRINP3Q76B58 766 aa10.13□□□□□ -0.79
VAPB-201ENST00000265619 RPAINQ86UA6 219 aa10.13□□□□□ -0.79
VAPB-201ENST00000265619 ABCB6Q9NP58 842 aa10.13□□□□□ -0.79
VAPB-201ENST00000265619 C1orf167Q5SNV9 1468 aa10.13□□□□□ -0.79
VAPB-201ENST00000265619 SRGAP3O43295 1099 aa10.13□□□□□ -0.79
VAPB-201ENST00000265619 MON2Q7Z3U7 1717 aa10.13□□□□□ -0.79
VAPB-201ENST00000265619 EFCAB13Q8IY85 973 aa10.13□□□□□ -0.79
VAPB-201ENST00000265619 IL17REQ8NFR9 667 aa10.13□□□□□ -0.79
VAPB-201ENST00000265619 PUF60Q9UHX1 559 aaKnown RBP10.13□□□□□ -0.79
VAPB-201ENST00000265619 PAX7P23759 505 aa10.12□□□□□ -0.79
VAPB-201ENST00000265619 GSDMDP57764 484 aa10.12□□□□□ -0.79
VAPB-201ENST00000265619 RIN2Q8WYP3 895 aaPredicted RBP10.12□□□□□ -0.79
VAPB-201ENST00000265619 KIFC2Q96AC6 838 aa10.12□□□□□ -0.79
VAPB-201ENST00000265619 FAXDC2Q96IV6 333 aa10.12□□□□□ -0.79
VAPB-201ENST00000265619 FAM204AQ9H8W3 233 aa10.12□□□□□ -0.79
VAPB-201ENST00000265619 ANKARQ7Z5J8 1434 aa10.12□□□□□ -0.79
VAPB-201ENST00000265619 LRRIQ3A6PVS8 624 aaPredicted RBP10.12□□□□□ -0.79
VAPB-201ENST00000265619 BIN1O00499 593 aa10.12□□□□□ -0.79
VAPB-201ENST00000265619 KIF1CO43896 1103 aaKnown RBP10.12□□□□□ -0.79
VAPB-201ENST00000265619 ATP2B2Q01814 1243 aa10.12□□□□□ -0.79
VAPB-201ENST00000265619 SCAND2PQ9GZW5 306 aaPredicted RBP10.12□□□□□ -0.79
VAPB-201ENST00000265619 ANKRD26Q9UPS8 1709 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 TMEM232C9JQI7 657 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 CCAR1Q8IX12 1150 aaKnown RBP10.11□□□□□ -0.79
VAPB-201ENST00000265619 PI4K2BQ8TCG2 481 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 CD248Q9HCU0 757 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 STAP2Q9UGK3 403 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 XRN1Q8IZH2 1706 aaKnown RBP10.11□□□□□ -0.79
VAPB-201ENST00000265619 AKAP12Q02952 1782 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 CHD2O14647 1828 aaKnown RBP10.11□□□□□ -0.79
VAPB-201ENST00000265619 ERLIN2O94905 339 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 PDE6BP35913 854 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 GNG11P61952 73 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 BIRC2Q13490 618 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 HDGFL1Q5TGJ6 251 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 NAIF1Q69YI7 327 aaPredicted RBP10.11□□□□□ -0.79
VAPB-201ENST00000265619 ARHGEF25Q86VW2 580 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 IGSF1Q8N6C5 1336 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 A0A087WUV0 522 aaPredicted RBP10.11□□□□□ -0.79
VAPB-201ENST00000265619 BTBD11A6QL63 1104 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 TXLNAP40222 546 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 TOGARAM2Q6ZUX3 1019 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 KIRREL3Q8IZU9 778 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 PRPF38AQ8NAV1 312 aaKnown RBP10.11□□□□□ -0.79
VAPB-201ENST00000265619 CCDC102AQ96A19 550 aa10.11□□□□□ -0.79
VAPB-201ENST00000265619 PRAMEF22A3QJZ6 481 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 LMOD1P29536 600 aaPredicted RBP10.1□□□□□ -0.79
VAPB-201ENST00000265619 KARSQ15046 597 aaKnown RBP10.1□□□□□ -0.79
VAPB-201ENST00000265619 LRCH2Q5VUJ6 765 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 DESI2Q9BSY9 194 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 HSD3B7Q9H2F3 369 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms