RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 ICE2Q659A1 982 aa13.24□□□□□ -0.29
DNMT3A-201ENST00000264709 PHF23Q9BUL5 403 aaPredicted RBP13.24□□□□□ -0.29
DNMT3A-201ENST00000264709 SARNPP82979 210 aaKnown RBP13.24□□□□□ -0.29
DNMT3A-201ENST00000264709 TAX1BP1Q86VP1 789 aa13.24□□□□□ -0.29
DNMT3A-201ENST00000264709 PPP2R5EQ16537 467 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 SAMD15Q9P1V8 674 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 F6X3S4 739 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 C6orf163Q5TEZ5 329 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 CCDC155Q8N6L0 562 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 NAPBQ9H115 298 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 SLC20A2Q08357 652 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 ERCC6LQ2NKX8 1250 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 LMBR1Q8WVP7 490 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 USP32Q8NFA0 1604 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 MED14O60244 1454 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 IKBKBO14920 756 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 CTIFO43310 598 aaKnown RBP13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 ADALQ6DHV7 355 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 C17orf53Q8N3J3 647 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 NAP1L3Q99457 506 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 FKBP4Q02790 459 aaKnown RBP eCLIP13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 PPP2R5BQ15173 497 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 RRP15Q9Y3B9 282 aaKnown RBP13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 CEP57Q86XR8 500 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 IFT20Q8IY31 132 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 LRRC45Q96CN5 670 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 KRT23Q9C075 422 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 GADD45BO75293 160 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 FANCCQ00597 558 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 C8orf58Q8NAV2 365 aa13.23□□□□□ -0.29
DNMT3A-201ENST00000264709 KIAA1468Q9P260 1216 aa13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 A0A087WUV0 522 aaPredicted RBP13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 CHL1O00533 1208 aa13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 LUC7L3O95232 432 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 CEP128Q6ZU80 1094 aa13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 RPAINQ86UA6 219 aa13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 TCP11L1Q9NUJ3 509 aa13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 LINS1Q8NG48 757 aa13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 ATRIPQ8WXE1 791 aa13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 SPATA24Q86W54 205 aa13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 CCDC42Q96M95 316 aa13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 TANGO6Q9C0B7 1094 aa13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 MAGEA9P43362 315 aa13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 MMS22LQ6ZRQ5 1243 aa13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 IQCA1Q86XH1 822 aa13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 JRKLQ9Y4A0 524 aa13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 KRT18P05783 430 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 Q6ZUG5 572 aa13.22□□□□□ -0.29
DNMT3A-201ENST00000264709 ARAP3Q8WWN8 1544 aa13.21□□□□□ -0.29
DNMT3A-201ENST00000264709 PNMA6AP0CW24 399 aaPredicted RBP13.21□□□□□ -0.29
DNMT3A-201ENST00000264709 GSPT1P15170 499 aaKnown RBP13.21□□□□□ -0.29
DNMT3A-201ENST00000264709 NLRP12P59046 1061 aa13.21□□□□□ -0.29
DNMT3A-201ENST00000264709 GIGYF1O75420 1035 aaPredicted RBP13.21□□□□□ -0.29
DNMT3A-201ENST00000264709 MAP3K9P80192 1104 aa13.21□□□□□ -0.29
DNMT3A-201ENST00000264709 ZSWIM4Q9H7M6 989 aa13.21□□□□□ -0.29
DNMT3A-201ENST00000264709 PTPDC1A2A3K4 754 aa13.21□□□□□ -0.29
DNMT3A-201ENST00000264709 MTMR3Q13615 1198 aa13.21□□□□□ -0.29
DNMT3A-201ENST00000264709 TMEM266Q2M3C6 531 aa13.21□□□□□ -0.29
DNMT3A-201ENST00000264709 LACTBP83111 547 aaPredicted RBP13.21□□□□□ -0.29
DNMT3A-201ENST00000264709 CATIPQ7Z7H3 387 aa13.21□□□□□ -0.3
DNMT3A-201ENST00000264709 YTHDC2Q9H6S0 1430 aaKnown RBP13.21□□□□□ -0.3
DNMT3A-201ENST00000264709 ERCC3P19447 782 aa13.21□□□□□ -0.3
DNMT3A-201ENST00000264709 MAP3K12Q12852 859 aa13.21□□□□□ -0.3
DNMT3A-201ENST00000264709 IQUBQ8NA54 791 aa13.21□□□□□ -0.3
DNMT3A-201ENST00000264709 MYO10Q9HD67 2058 aa13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 ZSCAN20P17040 1043 aaPredicted RBP13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 IGSF22Q8N9C0 903 aa13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 ANKRD7Q92527 254 aa13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 GRM8O00222 908 aa13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 CUTAO60888 179 aa13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 POLKQ9UBT6 870 aa13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 IGSF3O75054 1194 aa13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 ATP5DP30049 168 aa13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 NUP58Q9BVL2 599 aa13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 SETSIPP0DME0 302 aa13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 MTMR6Q9Y217 621 aa13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 TRIM75PA6NK02 468 aa13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 IFIT1P09914 478 aaKnown RBP13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 CPLX4Q7Z7G2 160 aa13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 SNX14Q9Y5W7 946 aa13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 NECAB1Q8N987 351 aa13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 ZNF622Q969S3 477 aaKnown RBP eCLIP13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 AATKQ6ZMQ8 1374 aa13.2□□□□□ -0.3
DNMT3A-201ENST00000264709 ZNF202O95125 648 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 MTIF2P46199 727 aaKnown RBP13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 TSHZ3Q63HK5 1081 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 BPIFA3Q9BQP9 254 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 TMCO5BA8MYB1 307 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 ZNF569Q5MCW4 686 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 DENND4BO75064 1496 aaPredicted RBP13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 GOLGA8AA7E2F4 631 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 CETN1Q12798 172 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 SYNRGQ9UMZ2 1314 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 BAZ2BQ9UIF8 2168 aaKnown RBP13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 CCDC194A0A1B0GVG4 234 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 ZBTB43O43298 467 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 PAK2Q13177 524 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 SOGA3Q5TF21 947 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 CABS1Q96KC9 395 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 LZTFL1Q9NQ48 299 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms