RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 CHD2O14647 1828 aaKnown RBP14.4□□□□□ -0.1
CHMP3-201ENST00000263856 NEMFO60524 1076 aa14.4□□□□□ -0.1
CHMP3-201ENST00000263856 SLU7O95391 586 aaKnown RBP14.4□□□□□ -0.1
CHMP3-201ENST00000263856 ATP1A3P13637 1013 aa14.4□□□□□ -0.1
CHMP3-201ENST00000263856 FDPSP14324 419 aaKnown RBP14.4□□□□□ -0.1
CHMP3-201ENST00000263856 ADORA1P30542 326 aa14.4□□□□□ -0.1
CHMP3-201ENST00000263856 SARM1Q6SZW1 724 aa14.4□□□□□ -0.1
CHMP3-201ENST00000263856 ENGASEQ8NFI3 743 aa14.4□□□□□ -0.1
CHMP3-201ENST00000263856 KIAA1468Q9P260 1216 aa14.4□□□□□ -0.1
CHMP3-201ENST00000263856 ADGRL3Q9HAR2 1447 aa14.39□□□□□ -0.11
CHMP3-201ENST00000263856 NFAT5O94916 1531 aa14.39□□□□□ -0.11
CHMP3-201ENST00000263856 RNF113AO15541 343 aaKnown RBP14.39□□□□□ -0.11
CHMP3-201ENST00000263856 CFAP100Q494V2 611 aa14.39□□□□□ -0.11
CHMP3-201ENST00000263856 DNAI1Q9UI46 699 aa14.39□□□□□ -0.11
CHMP3-201ENST00000263856 ZNF202O95125 648 aa14.39□□□□□ -0.11
CHMP3-201ENST00000263856 ATP2B1P20020 1258 aa14.39□□□□□ -0.11
CHMP3-201ENST00000263856 IMMTQ16891 758 aaKnown RBP14.39□□□□□ -0.11
CHMP3-201ENST00000263856 FMR1NBQ8N0W7 255 aaPredicted RBP14.39□□□□□ -0.11
CHMP3-201ENST00000263856 ZNF397Q8NF99 534 aaPredicted RBP14.39□□□□□ -0.11
CHMP3-201ENST00000263856 DENND2AQ9ULE3 1009 aa14.39□□□□□ -0.11
CHMP3-201ENST00000263856 SLIT1O75093 1534 aa14.39□□□□□ -0.11
CHMP3-201ENST00000263856 SPECC1Q5M775 1068 aa14.38□□□□□ -0.11
CHMP3-201ENST00000263856 ZMYM1Q5SVZ6 1142 aa14.38□□□□□ -0.11
CHMP3-201ENST00000263856 PDILTQ8N807 584 aa14.38□□□□□ -0.11
CHMP3-201ENST00000263856 HELLSQ9NRZ9 838 aa14.38□□□□□ -0.11
CHMP3-201ENST00000263856 CEP126Q9P2H0 1117 aa14.38□□□□□ -0.11
CHMP3-201ENST00000263856 SH3TC1Q8TE82 1336 aa14.38□□□□□ -0.11
CHMP3-201ENST00000263856 EXOSC10Q01780 885 aaKnown RBP14.38□□□□□ -0.11
CHMP3-201ENST00000263856 NBPF11Q86T75 865 aa14.38□□□□□ -0.11
CHMP3-201ENST00000263856 MICU3Q86XE3 530 aa14.38□□□□□ -0.11
CHMP3-201ENST00000263856 CCDC82Q8N4S0 544 aa14.38□□□□□ -0.11
CHMP3-201ENST00000263856 LINC00301Q8NCQ3 95 aa14.38□□□□□ -0.11
CHMP3-201ENST00000263856 DSCC1Q9BVC3 393 aa14.38□□□□□ -0.11
CHMP3-201ENST00000263856 CWC25Q9NXE8 425 aaPredicted RBP14.38□□□□□ -0.11
CHMP3-201ENST00000263856 DDX41Q9UJV9 622 aaKnown RBP14.38□□□□□ -0.11
CHMP3-201ENST00000263856 HEG1Q9ULI3 1381 aa14.38□□□□□ -0.11
CHMP3-201ENST00000263856 KIF28PB7ZC32 967 aa14.38□□□□□ -0.11
CHMP3-201ENST00000263856 ADALQ6DHV7 355 aa14.38□□□□□ -0.11
CHMP3-201ENST00000263856 ATG9AQ7Z3C6 839 aa14.38□□□□□ -0.11
CHMP3-201ENST00000263856 PHKBQ93100 1093 aa14.38□□□□□ -0.11
CHMP3-201ENST00000263856 GSDMDP57764 484 aa14.37□□□□□ -0.11
CHMP3-201ENST00000263856 CCDC158Q5M9N0 1113 aa14.37□□□□□ -0.11
CHMP3-201ENST00000263856 MYSM1Q5VVJ2 828 aa14.37□□□□□ -0.11
CHMP3-201ENST00000263856 ARMCX5Q6P1M9 558 aa14.37□□□□□ -0.11
CHMP3-201ENST00000263856 KRT222Q8N1A0 295 aa14.37□□□□□ -0.11
CHMP3-201ENST00000263856 PPP1R13BQ96KQ4 1090 aa14.37□□□□□ -0.11
CHMP3-201ENST00000263856 MYL10Q9BUA6 226 aa14.37□□□□□ -0.11
CHMP3-201ENST00000263856 NCAPD2Q15021 1401 aa14.37□□□□□ -0.11
CHMP3-201ENST00000263856 URI1O94763 535 aaPredicted RBP14.37□□□□□ -0.11
CHMP3-201ENST00000263856 PFKFB1P16118 471 aa14.37□□□□□ -0.11
CHMP3-201ENST00000263856 RBM6P78332 1123 aaKnown RBP14.37□□□□□ -0.11
CHMP3-201ENST00000263856 CCDC57Q2TAC2 916 aa14.37□□□□□ -0.11
CHMP3-201ENST00000263856 NFXL1Q6ZNB6 911 aa14.37□□□□□ -0.11
CHMP3-201ENST00000263856 NYAP1Q6ZVC0 841 aa14.37□□□□□ -0.11
CHMP3-201ENST00000263856 PROSER2Q86WR7 435 aaPredicted RBP14.37□□□□□ -0.11
CHMP3-201ENST00000263856 TOMM22Q9NS69 142 aa14.37□□□□□ -0.11
CHMP3-201ENST00000263856 JCADQ9P266 1359 aa14.37□□□□□ -0.11
CHMP3-201ENST00000263856 CYP27B1O15528 508 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 FGAP02671 866 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 E4F1Q66K89 784 aaPredicted RBP14.36□□□□□ -0.11
CHMP3-201ENST00000263856 PLBD2Q8NHP8 589 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 ERO1AQ96HE7 468 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 KDM6AO15550 1401 aaPredicted RBP14.36□□□□□ -0.11
CHMP3-201ENST00000263856 KAT6BQ8WYB5 2073 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 LMO7Q8WWI1 1683 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 ZNF213O14771 459 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 ZAP70P43403 619 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 PNOCQ13519 176 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 CLIC6Q96NY7 704 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 TRERF1Q96PN7 1200 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 ARHGAP23Q9P227 1491 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 EYA2O00167 538 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 IL15P40933 162 aaPredicted RBP14.36□□□□□ -0.11
CHMP3-201ENST00000263856 FOXO4P98177 505 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 FANCCQ00597 558 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 SCARF1Q14162 830 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 RABL6Q3YEC7 729 aaPredicted RBP14.36□□□□□ -0.11
CHMP3-201ENST00000263856 MNS1Q8NEH6 495 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 KCNG4Q8TDN1 519 aa14.36□□□□□ -0.11
CHMP3-201ENST00000263856 ZNF274Q96GC6 653 aaPredicted RBP14.36□□□□□ -0.11
CHMP3-201ENST00000263856 UTP14AQ9BVJ6 771 aaKnown RBP14.36□□□□□ -0.11
CHMP3-201ENST00000263856 KIF20AO95235 890 aa14.35□□□□□ -0.11
CHMP3-201ENST00000263856 SYKP43405 635 aa14.35□□□□□ -0.11
CHMP3-201ENST00000263856 TRDNQ13061 729 aa14.35□□□□□ -0.11
CHMP3-201ENST00000263856 ARHGAP29Q52LW3 1261 aa14.35□□□□□ -0.11
CHMP3-201ENST00000263856 PUS7LQ9H0K6 701 aaKnown RBP14.35□□□□□ -0.11
CHMP3-201ENST00000263856 RTEL1Q9NZ71 1219 aa14.35□□□□□ -0.11
CHMP3-201ENST00000263856 IDH1O75874 414 aaKnown RBP14.35□□□□□ -0.11
CHMP3-201ENST00000263856 UBASH3AP57075 661 aa14.35□□□□□ -0.11
CHMP3-201ENST00000263856 ANO1Q5XXA6 986 aa14.35□□□□□ -0.11
CHMP3-201ENST00000263856 KLHL34Q8N239 644 aa14.35□□□□□ -0.11
CHMP3-201ENST00000263856 NBPF26B4DH59 902 aa14.34□□□□□ -0.11
CHMP3-201ENST00000263856 DHX16O60231 1041 aaKnown RBP14.34□□□□□ -0.11
CHMP3-201ENST00000263856 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
CHMP3-201ENST00000263856 NBPF14Q5TI25 921 aa14.34□□□□□ -0.11
CHMP3-201ENST00000263856 NBPF10Q6P3W6 841 aaKnown RBP14.34□□□□□ -0.11
CHMP3-201ENST00000263856 NBPF15Q8N660 670 aa14.34□□□□□ -0.11
CHMP3-201ENST00000263856 DPF2Q92785 391 aa14.34□□□□□ -0.11
CHMP3-201ENST00000263856 ALG1Q9BT22 464 aa14.34□□□□□ -0.11
CHMP3-201ENST00000263856 EPC1Q9H2F5 836 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms