RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 ZNF646O15015 1829 aaPredicted RBP11.42□□□□□ -0.58
LCN1-201ENST00000263598 F8W031 263 aaPredicted RBP11.41□□□□□ -0.58
LCN1-201ENST00000263598 CASP7P55210 303 aa11.41□□□□□ -0.58
LCN1-201ENST00000263598 FKBP1AP62942 108 aaKnown RBP11.41□□□□□ -0.58
LCN1-201ENST00000263598 IFIT5Q13325 482 aaKnown RBP11.41□□□□□ -0.58
LCN1-201ENST00000263598 INTS3Q68E01 1043 aaKnown RBP11.41□□□□□ -0.58
LCN1-201ENST00000263598 OTUD7BQ6GQQ9 843 aa11.41□□□□□ -0.58
LCN1-201ENST00000263598 C15orf52Q6ZUT6 534 aaKnown RBP11.41□□□□□ -0.58
LCN1-201ENST00000263598 WWC1Q8IX03 1113 aa11.41□□□□□ -0.58
LCN1-201ENST00000263598 GCC1Q96CN9 775 aa11.41□□□□□ -0.58
LCN1-201ENST00000263598 WNK4Q96J92 1243 aa11.41□□□□□ -0.58
LCN1-201ENST00000263598 FZD1Q9UP38 647 aa11.41□□□□□ -0.58
LCN1-201ENST00000263598 CLRN2A0PK11 232 aa11.4□□□□□ -0.58
LCN1-201ENST00000263598 SPDYE2BA6NHP3 402 aa11.4□□□□□ -0.58
LCN1-201ENST00000263598 TAF5LO75529 589 aa11.4□□□□□ -0.58
LCN1-201ENST00000263598 SPDYE6P0CI01 402 aa11.4□□□□□ -0.58
LCN1-201ENST00000263598 IL1R1P14778 569 aa11.4□□□□□ -0.58
LCN1-201ENST00000263598 IREB2P48200 963 aaKnown RBP11.4□□□□□ -0.58
LCN1-201ENST00000263598 RBM5P52756 815 aaKnown RBP eCLIP11.4□□□□□ -0.58
LCN1-201ENST00000263598 CFAP100Q494V2 611 aa11.4□□□□□ -0.58
LCN1-201ENST00000263598 OTOP1Q7RTM1 612 aa11.4□□□□□ -0.58
LCN1-201ENST00000263598 CERS5Q8N5B7 392 aa11.4□□□□□ -0.58
LCN1-201ENST00000263598 HELBQ8NG08 1087 aaPredicted RBP11.4□□□□□ -0.58
LCN1-201ENST00000263598 ERO1AQ96HE7 468 aa11.4□□□□□ -0.58
LCN1-201ENST00000263598 CLMNQ96JQ2 1002 aa11.4□□□□□ -0.58
LCN1-201ENST00000263598 VEZTQ9HBM0 779 aa11.4□□□□□ -0.58
LCN1-201ENST00000263598 CHMP3Q9Y3E7 222 aa11.4□□□□□ -0.58
LCN1-201ENST00000263598 PDE4DIPQ5VU43 2346 aa11.4□□□□□ -0.59
LCN1-201ENST00000263598 IL16Q14005 1332 aa11.39□□□□□ -0.59
LCN1-201ENST00000263598 SNAP23O00161 211 aa11.39□□□□□ -0.59
LCN1-201ENST00000263598 TAF7LQ5H9L4 462 aa11.39□□□□□ -0.59
LCN1-201ENST00000263598 ANKRD13AQ8IZ07 590 aa11.39□□□□□ -0.59
LCN1-201ENST00000263598 PRMT6Q96LA8 375 aaPredicted RBP11.39□□□□□ -0.59
LCN1-201ENST00000263598 IRS2Q9Y4H2 1338 aa11.38□□□□□ -0.59
LCN1-201ENST00000263598 SSC5DA1L4H1 1573 aa11.38□□□□□ -0.59
LCN1-201ENST00000263598 IGF2BP3O00425 579 aaKnown RBP eCLIP11.38□□□□□ -0.59
LCN1-201ENST00000263598 FOXO4P98177 505 aa11.38□□□□□ -0.59
LCN1-201ENST00000263598 TNFAIP1Q13829 316 aa11.38□□□□□ -0.59
LCN1-201ENST00000263598 RASA3Q14644 834 aa11.38□□□□□ -0.59
LCN1-201ENST00000263598 CCDC57Q2TAC2 916 aa11.38□□□□□ -0.59
LCN1-201ENST00000263598 NBPF12Q5TAG4 269 aaPredicted RBP11.38□□□□□ -0.59
LCN1-201ENST00000263598 PTPN22Q9Y2R2 807 aa11.38□□□□□ -0.59
LCN1-201ENST00000263598 PCDHAC2Q9Y5I4 1007 aa11.38□□□□□ -0.59
LCN1-201ENST00000263598 PLIN1O60240 522 aa11.37□□□□□ -0.59
LCN1-201ENST00000263598 USP2O75604 605 aaPredicted RBP11.37□□□□□ -0.59
LCN1-201ENST00000263598 CRHR2Q13324 411 aa11.37□□□□□ -0.59
LCN1-201ENST00000263598 NCBP3Q53F19 620 aaKnown RBP11.37□□□□□ -0.59
LCN1-201ENST00000263598 LDHAL6AQ6ZMR3 332 aa11.37□□□□□ -0.59
LCN1-201ENST00000263598 EFCC1Q9HA90 598 aa11.37□□□□□ -0.59
LCN1-201ENST00000263598 CNNM1Q9NRU3 951 aa11.37□□□□□ -0.59
LCN1-201ENST00000263598 FANCIQ9NVI1 1328 aa11.36□□□□□ -0.59
LCN1-201ENST00000263598 TESPA1A2RU30 521 aaPredicted RBP11.36□□□□□ -0.59
LCN1-201ENST00000263598 POTEFA5A3E0 1075 aa11.36□□□□□ -0.59
LCN1-201ENST00000263598 SP3Q02447 781 aa11.36□□□□□ -0.59
LCN1-201ENST00000263598 ARHGEF6Q15052 776 aa11.36□□□□□ -0.59
LCN1-201ENST00000263598 LMBR1LQ6UX01 489 aa11.36□□□□□ -0.59
LCN1-201ENST00000263598 CD99L2Q8TCZ2 262 aa11.36□□□□□ -0.59
LCN1-201ENST00000263598 OPTNQ96CV9 577 aa11.36□□□□□ -0.59
LCN1-201ENST00000263598 SERPINA10Q9UK55 444 aa11.36□□□□□ -0.59
LCN1-201ENST00000263598 JAG2Q9Y219 1238 aa11.36□□□□□ -0.59
LCN1-201ENST00000263598 VAMP4O75379 141 aa11.35□□□□□ -0.59
LCN1-201ENST00000263598 GJA5P36382 358 aa11.35□□□□□ -0.59
LCN1-201ENST00000263598 SPDYE2Q495Y8 402 aa11.35□□□□□ -0.59
LCN1-201ENST00000263598 MFSD14BQ5SR56 506 aa11.35□□□□□ -0.59
LCN1-201ENST00000263598 BEND3Q5T5X7 828 aa11.35□□□□□ -0.59
LCN1-201ENST00000263598 ZNF594Q96JF6 807 aaPredicted RBP11.35□□□□□ -0.59
LCN1-201ENST00000263598 ZNF70Q9UC06 446 aaPredicted RBP11.35□□□□□ -0.59
LCN1-201ENST00000263598 TTF2Q9UNY4 1162 aaKnown RBP11.35□□□□□ -0.59
LCN1-201ENST00000263598 FAM205AQ6ZU69 1335 aa11.35□□□□□ -0.59
LCN1-201ENST00000263598 F6X3S4 739 aa11.34□□□□□ -0.59
LCN1-201ENST00000263598 GRM8O00222 908 aa11.34□□□□□ -0.59
LCN1-201ENST00000263598 WDHD1O75717 1129 aaPredicted RBP11.34□□□□□ -0.59
LCN1-201ENST00000263598 HIBADHP31937 336 aaKnown RBP11.34□□□□□ -0.59
LCN1-201ENST00000263598 TNNI2P48788 182 aa11.34□□□□□ -0.59
LCN1-201ENST00000263598 UBE4AQ14139 1066 aa11.34□□□□□ -0.59
LCN1-201ENST00000263598 WDR63Q8IWG1 891 aa11.34□□□□□ -0.59
LCN1-201ENST00000263598 TDRD7Q8NHU6 1098 aaKnown RBP11.34□□□□□ -0.59
LCN1-201ENST00000263598 ARMC5Q96C12 935 aa11.34□□□□□ -0.59
LCN1-201ENST00000263598 PTPN18Q99952 460 aa11.34□□□□□ -0.59
LCN1-201ENST00000263598 TMEM106CQ9BVX2 250 aa11.34□□□□□ -0.59
LCN1-201ENST00000263598 TDRD3Q9H7E2 651 aaKnown RBP11.34□□□□□ -0.59
LCN1-201ENST00000263598 ELP3Q9H9T3 547 aa11.34□□□□□ -0.59
LCN1-201ENST00000263598 C9orf78Q9NZ63 289 aaPredicted RBP11.34□□□□□ -0.59
LCN1-201ENST00000263598 ECM29Q5VYK3 1845 aa11.34□□□□□ -0.59
LCN1-201ENST00000263598 AOX1Q06278 1338 aa11.34□□□□□ -0.59
LCN1-201ENST00000263598 GTF2A2P52657 109 aa11.33□□□□□ -0.6
LCN1-201ENST00000263598 EXOSC9Q06265 439 aaKnown RBP11.33□□□□□ -0.6
LCN1-201ENST00000263598 CCDC184Q52MB2 194 aa11.33□□□□□ -0.6
LCN1-201ENST00000263598 HABP4Q5JVS0 413 aaKnown RBP11.33□□□□□ -0.6
LCN1-201ENST00000263598 NBPF11Q86T75 865 aa11.33□□□□□ -0.6
LCN1-201ENST00000263598 DZIP1LQ8IYY4 767 aaKnown RBP11.33□□□□□ -0.6
LCN1-201ENST00000263598 MS4A4AQ96JQ5 239 aa11.33□□□□□ -0.6
LCN1-201ENST00000263598 ZFYVE28Q9HCC9 887 aa11.33□□□□□ -0.6
LCN1-201ENST00000263598 CSADQ9Y600 493 aa11.33□□□□□ -0.6
LCN1-201ENST00000263598 LAMB1P07942 1786 aa11.33□□□□□ -0.6
LCN1-201ENST00000263598 HTTP42858 3142 aa11.33□□□□□ -0.6
LCN1-201ENST00000263598 CCL15-CCL14A0A0B4J2E2 113 aa11.32□□□□□ -0.6
LCN1-201ENST00000263598 TCP10L2B9ZVM9 353 aa11.32□□□□□ -0.6
LCN1-201ENST00000263598 EN2P19622 333 aaPredicted RBP11.32□□□□□ -0.6
LCN1-201ENST00000263598 CRKP46108 304 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms