RNA–Protein interactions for RNA: ENST00000262316.10

RHBDF1-201, Transcript of rhomboid 5 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDF1, Length 2,992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-201ENST00000262316 SMIM22K7EJ46 135 aa20.18■□□□□ 0.82
RHBDF1-201ENST00000262316 CAMTA2O94983 1202 aa20.18■□□□□ 0.82
RHBDF1-201ENST00000262316 POLR3DP05423 398 aaPredicted RBP20.18■□□□□ 0.82
RHBDF1-201ENST00000262316 CTDSPL2Q05D32 466 aa20.18■□□□□ 0.82
RHBDF1-201ENST00000262316 RASGRF1Q13972 1273 aa20.18■□□□□ 0.82
RHBDF1-201ENST00000262316 SRP68Q9UHB9 627 aaKnown RBP20.18■□□□□ 0.82
RHBDF1-201ENST00000262316 JCADQ9P266 1359 aa20.18■□□□□ 0.82
RHBDF1-201ENST00000262316 RALYLQ86SE5 291 aaKnown RBP20.18■□□□□ 0.82
RHBDF1-201ENST00000262316 CCDC82Q8N4S0 544 aa20.18■□□□□ 0.82
RHBDF1-201ENST00000262316 ZKSCAN3Q9BRR0 538 aa20.18■□□□□ 0.82
RHBDF1-201ENST00000262316 ROBO1Q9Y6N7 1651 aa20.18■□□□□ 0.82
RHBDF1-201ENST00000262316 B4E1Z4 1266 aa20.17■□□□□ 0.82
RHBDF1-201ENST00000262316 PDE6AP16499 860 aa20.17■□□□□ 0.82
RHBDF1-201ENST00000262316 ERFEQ4G0M1 354 aa20.17■□□□□ 0.82
RHBDF1-201ENST00000262316 NUP188Q5SRE5 1749 aa20.17■□□□□ 0.82
RHBDF1-201ENST00000262316 CDHR2Q9BYE9 1310 aa20.17■□□□□ 0.82
RHBDF1-201ENST00000262316 UBAP1LF5GYI3 381 aa20.17■□□□□ 0.82
RHBDF1-201ENST00000262316 CHMP4CQ96CF2 233 aa20.17■□□□□ 0.82
RHBDF1-201ENST00000262316 AIFM3Q96NN9 605 aa20.17■□□□□ 0.82
RHBDF1-201ENST00000262316 GOLGA8BA8MQT2 603 aa20.16■□□□□ 0.82
RHBDF1-201ENST00000262316 GYG1P46976 350 aa20.16■□□□□ 0.82
RHBDF1-201ENST00000262316 LEO1Q8WVC0 666 aaPredicted RBP20.16■□□□□ 0.82
RHBDF1-201ENST00000262316 AIDAQ96BJ3 306 aa20.16■□□□□ 0.82
RHBDF1-201ENST00000262316 PPP1R9BQ96SB3 815 aa20.16■□□□□ 0.82
RHBDF1-201ENST00000262316 EP400Q96L91 3159 aa20.16■□□□□ 0.82
RHBDF1-201ENST00000262316 UBE2Q2LH0YL09 131 aa20.16■□□□□ 0.82
RHBDF1-201ENST00000262316 PFKFB2O60825 505 aa20.16■□□□□ 0.82
RHBDF1-201ENST00000262316 ADD2P35612 726 aa20.16■□□□□ 0.82
RHBDF1-201ENST00000262316 TBC1D10CQ8IV04 446 aa20.16■□□□□ 0.82
RHBDF1-201ENST00000262316 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.16■□□□□ 0.821e-6■■■■□ 23.6
RHBDF1-201ENST00000262316 ITGB4P16144 1822 aa20.16■□□□□ 0.82
RHBDF1-201ENST00000262316 ERVV-1B6SEH8 477 aa20.16■□□□□ 0.82
RHBDF1-201ENST00000262316 SLC4A8Q2Y0W8 1093 aa20.16■□□□□ 0.82
RHBDF1-201ENST00000262316 LINC00116Q8NCU8 138 aa20.16■□□□□ 0.82
RHBDF1-201ENST00000262316 PGBD1Q96JS3 809 aa20.16■□□□□ 0.82
RHBDF1-201ENST00000262316 MBD4O95243 580 aa20.15■□□□□ 0.82
RHBDF1-201ENST00000262316 ANTXR2P58335 489 aa20.15■□□□□ 0.82
RHBDF1-201ENST00000262316 PUM3Q15397 648 aaKnown RBP20.15■□□□□ 0.82
RHBDF1-201ENST00000262316 SPATA5Q8NB90 893 aa20.15■□□□□ 0.82
RHBDF1-201ENST00000262316 NR1I2O75469 434 aa20.15■□□□□ 0.82
RHBDF1-201ENST00000262316 PHF14O94880 888 aa20.15■□□□□ 0.82
RHBDF1-201ENST00000262316 ADD1P35611 737 aaKnown RBP20.15■□□□□ 0.82
RHBDF1-201ENST00000262316 TMEM87AQ8NBN3 555 aa20.15■□□□□ 0.82
RHBDF1-201ENST00000262316 PLEKHG2Q9H7P9 1386 aa20.14■□□□□ 0.82
RHBDF1-201ENST00000262316 IGHMBP2P38935 993 aaKnown RBP20.14■□□□□ 0.82
RHBDF1-201ENST00000262316 CYB5R4Q7L1T6 521 aa20.14■□□□□ 0.82
RHBDF1-201ENST00000262316 LPIN2Q92539 896 aa20.14■□□□□ 0.82
RHBDF1-201ENST00000262316 HMGB1P09429 215 aaKnown RBP20.14■□□□□ 0.81
RHBDF1-201ENST00000262316 NBPF3Q9H094 633 aa20.14■□□□□ 0.81
RHBDF1-201ENST00000262316 SPATA31A5Q5VU36 1347 aa20.14■□□□□ 0.81
RHBDF1-201ENST00000262316 SPATA31A7Q8IWB4 1347 aa20.14■□□□□ 0.81
RHBDF1-201ENST00000262316 CHRNDQ07001 517 aa20.13■□□□□ 0.81
RHBDF1-201ENST00000262316 RESTQ13127 1097 aa20.13■□□□□ 0.81
RHBDF1-201ENST00000262316 MICU3Q86XE3 530 aa20.13■□□□□ 0.81
RHBDF1-201ENST00000262316 LRP2BPQ9P2M1 347 aa20.13■□□□□ 0.81
RHBDF1-201ENST00000262316 CTNNA3Q9UI47 895 aa20.13■□□□□ 0.81
RHBDF1-201ENST00000262316 NPHP1O15259 732 aa20.13■□□□□ 0.81
RHBDF1-201ENST00000262316 SLC5A1P13866 664 aa20.13■□□□□ 0.81
RHBDF1-201ENST00000262316 MSNP26038 577 aaKnown RBP20.13■□□□□ 0.81
RHBDF1-201ENST00000262316 CPLX1O14810 134 aa20.13■□□□□ 0.81
RHBDF1-201ENST00000262316 ZFYP08048 801 aaPredicted RBP20.13■□□□□ 0.81
RHBDF1-201ENST00000262316 FDPSP14324 419 aaKnown RBP20.13■□□□□ 0.81
RHBDF1-201ENST00000262316 CMTR1Q8N1G2 835 aaKnown RBP20.13■□□□□ 0.81
RHBDF1-201ENST00000262316 PHKBQ93100 1093 aa20.13■□□□□ 0.81
RHBDF1-201ENST00000262316 NHSL1Q5SYE7 1610 aa20.13■□□□□ 0.81
RHBDF1-201ENST00000262316 MCM5P33992 734 aa20.12■□□□□ 0.81
RHBDF1-201ENST00000262316 LRRFIP1Q32MZ4 808 aaKnown RBP20.12■□□□□ 0.81
RHBDF1-201ENST00000262316 AMIGO3Q86WK7 504 aa20.12■□□□□ 0.81
RHBDF1-201ENST00000262316 NCOA7Q8NI08 942 aa20.12■□□□□ 0.81
RHBDF1-201ENST00000262316 USP28Q96RU2 1077 aa20.12■□□□□ 0.81
RHBDF1-201ENST00000262316 ALDH8A1Q9H2A2 487 aaPredicted RBP20.12■□□□□ 0.81
RHBDF1-201ENST00000262316 TRDNQ13061 729 aa20.12■□□□□ 0.81
RHBDF1-201ENST00000262316 CCDC152Q4G0S7 254 aa20.12■□□□□ 0.81
RHBDF1-201ENST00000262316 SPC24Q8NBT2 197 aa20.12■□□□□ 0.81
RHBDF1-201ENST00000262316 SLIT2O94813 1529 aa20.12■□□□□ 0.81
RHBDF1-201ENST00000262316 NTSR2O95665 410 aa20.11■□□□□ 0.81
RHBDF1-201ENST00000262316 NFXL1Q6ZNB6 911 aa20.11■□□□□ 0.81
RHBDF1-201ENST00000262316 NUP62CLQ9H1M0 184 aa20.11■□□□□ 0.81
RHBDF1-201ENST00000262316 CLCN1P35523 988 aa20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 CSPP1Q1MSJ5 1256 aa20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 TBC1D9BQ66K14 1250 aa20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 SDR42E1Q8WUS8 393 aa20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 TNMDQ9H2S6 317 aa20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 ORC3Q9UBD5 711 aaPredicted RBP20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 FBXO3Q9UK99 471 aa20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 MINDY4BA8MYZ0 360 aa20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 KLRK1P26718 216 aa20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 MB21D2Q8IYB1 491 aaPredicted RBP20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 C17orf53Q8N3J3 647 aaPredicted RBP20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 ADCY5O95622 1261 aa20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 LUZP1Q86V48 1076 aa20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 LCORLQ8N3X6 602 aa20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 SMARCC2Q8TAQ2 1214 aa20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 CELF1Q92879 486 aaKnown RBP20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 TFCP2L1Q9NZI6 479 aa20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 RAI14Q9P0K7 980 aa20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 TACC3Q9Y6A5 838 aa20.1■□□□□ 0.81
RHBDF1-201ENST00000262316 RFX7Q2KHR2 1363 aa20.09■□□□□ 0.81
RHBDF1-201ENST00000262316 PAPPAQ13219 1627 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms