RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 FBXO18Q8NFZ0 1043 aa18.25■□□□□ 0.51
PRPF40B-201ENST00000261897 RCOR1Q9UKL0 485 aa18.25■□□□□ 0.51
PRPF40B-201ENST00000261897 NFE2L3Q9Y4A8 694 aa18.25■□□□□ 0.51
PRPF40B-201ENST00000261897 COL3A1P02461 1466 aaPredicted RBP18.25■□□□□ 0.51
PRPF40B-201ENST00000261897 POGZQ7Z3K3 1410 aa18.25■□□□□ 0.51
PRPF40B-201ENST00000261897 ATP7AQ04656 1500 aa18.25■□□□□ 0.51
PRPF40B-201ENST00000261897 TIMM10P62072 90 aa18.25■□□□□ 0.51
PRPF40B-201ENST00000261897 SF3A3Q12874 501 aaKnown RBP eCLIP18.25■□□□□ 0.51
PRPF40B-201ENST00000261897 SLC39A6Q13433 755 aa18.25■□□□□ 0.51
PRPF40B-201ENST00000261897 HDXQ7Z353 690 aa18.25■□□□□ 0.51
PRPF40B-201ENST00000261897 GUCA1BQ9UMX6 200 aa18.25■□□□□ 0.51
PRPF40B-201ENST00000261897 EIF3CLB5ME19 914 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-201ENST00000261897 EIF3CQ99613 913 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-201ENST00000261897 CCT6AP40227 531 aaKnown RBP18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 NLRP12P59046 1061 aa18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 STAMQ92783 540 aa18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 FAM204AQ9H8W3 233 aa18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 ABCB6Q9NP58 842 aa18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 GRAMD1CQ8IYS0 662 aa18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 CTAGE15A4D2H0 777 aa18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 SOWAHDA6NJG2 315 aa18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 GRM8O00222 908 aa18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 ATP2C2O75185 946 aa18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 CCDC175P0C221 793 aa18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 CTAGE8P0CG41 777 aa18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 BEND3Q5T5X7 828 aa18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 CTAGE6Q86UF2 777 aa18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 CTAGE4Q8IX94 777 aa18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 KCNG4Q8TDN1 519 aa18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 RUFY1Q96T51 708 aa18.24■□□□□ 0.51
PRPF40B-201ENST00000261897 SASH1O94885 1247 aa18.23■□□□□ 0.51
PRPF40B-201ENST00000261897 MCMDC2Q4G0Z9 681 aa18.23■□□□□ 0.51
PRPF40B-201ENST00000261897 RIN2Q8WYP3 895 aaPredicted RBP18.23■□□□□ 0.51
PRPF40B-201ENST00000261897 PHKBQ93100 1093 aa18.23■□□□□ 0.51
PRPF40B-201ENST00000261897 ARHGAP6O43182 974 aa18.23■□□□□ 0.51
PRPF40B-201ENST00000261897 CCDC102BQ68D86 513 aa18.23■□□□□ 0.51
PRPF40B-201ENST00000261897 CPLX2Q6PUV4 134 aaKnown RBP18.23■□□□□ 0.51
PRPF40B-201ENST00000261897 L2HGDHQ9H9P8 463 aa18.23■□□□□ 0.51
PRPF40B-201ENST00000261897 PARP3Q9Y6F1 533 aa18.23■□□□□ 0.51
PRPF40B-201ENST00000261897 CDC5LQ99459 802 aaKnown RBP18.23■□□□□ 0.51
PRPF40B-201ENST00000261897 MYL10Q9BUA6 226 aa18.23■□□□□ 0.51
PRPF40B-201ENST00000261897 ABCC3O15438 1527 aa18.22■□□□□ 0.51
PRPF40B-201ENST00000261897 KIF1BO60333 1816 aa18.22■□□□□ 0.51
PRPF40B-201ENST00000261897 RNF187Q5TA31 235 aaPredicted RBP18.22■□□□□ 0.51
PRPF40B-201ENST00000261897 MPHOSPH8Q99549 860 aa18.22■□□□□ 0.51
PRPF40B-201ENST00000261897 NUP88Q99567 741 aaPredicted RBP18.22■□□□□ 0.51
PRPF40B-201ENST00000261897 ENC1O14682 589 aa18.22■□□□□ 0.51
PRPF40B-201ENST00000261897 ZEB2O60315 1214 aa18.22■□□□□ 0.51
PRPF40B-201ENST00000261897 DBF4Q9UBU7 674 aaPredicted RBP18.22■□□□□ 0.51
PRPF40B-201ENST00000261897 SSBP05455 408 aaKnown RBP eCLIP18.22■□□□□ 0.51
PRPF40B-201ENST00000261897 ADALQ6DHV7 355 aa18.22■□□□□ 0.51
PRPF40B-201ENST00000261897 LRRC59Q96AG4 307 aaKnown RBP18.22■□□□□ 0.51
PRPF40B-201ENST00000261897 OSBPL5Q9H0X9 879 aaPredicted RBP18.22■□□□□ 0.51
PRPF40B-201ENST00000261897 TULP2O00295 520 aa18.21■□□□□ 0.51
PRPF40B-201ENST00000261897 TXLNAP40222 546 aa18.21■□□□□ 0.51
PRPF40B-201ENST00000261897 CCT5P48643 541 aa18.21■□□□□ 0.51
PRPF40B-201ENST00000261897 TSR1Q2NL82 804 aaKnown RBP18.21■□□□□ 0.51
PRPF40B-201ENST00000261897 JMYQ8N9B5 988 aa18.21■□□□□ 0.51
PRPF40B-201ENST00000261897 EEF2KMTQ96G04 330 aa18.21■□□□□ 0.51
PRPF40B-201ENST00000261897 PSMB7Q99436 277 aa18.21■□□□□ 0.51
PRPF40B-201ENST00000261897 EP400NLQ6ZTU2 488 aa18.21■□□□□ 0.51
PRPF40B-201ENST00000261897 GSPT2Q8IYD1 628 aaKnown RBP18.21■□□□□ 0.51
PRPF40B-201ENST00000261897 MAPK8IP1Q9UQF2 711 aa18.21■□□□□ 0.51
PRPF40B-201ENST00000261897 ERBB3P21860 1342 aa18.21■□□□□ 0.51
PRPF40B-201ENST00000261897 ANO1Q5XXA6 986 aa18.21■□□□□ 0.5
PRPF40B-201ENST00000261897 ALG1Q9BT22 464 aa18.21■□□□□ 0.5
PRPF40B-201ENST00000261897 SAMM50Q9Y512 469 aa18.21■□□□□ 0.5
PRPF40B-201ENST00000261897 CTAGE9A4FU28 777 aa18.2■□□□□ 0.5
PRPF40B-201ENST00000261897 FOXN1O15353 648 aa18.2■□□□□ 0.5
PRPF40B-201ENST00000261897 NAP1L1P55209 391 aaKnown RBP18.2■□□□□ 0.5
PRPF40B-201ENST00000261897 POLA2Q14181 598 aa18.2■□□□□ 0.5
PRPF40B-201ENST00000261897 FMR1NBQ8N0W7 255 aaPredicted RBP18.2■□□□□ 0.5
PRPF40B-201ENST00000261897 PCDHA5Q9Y5H7 936 aa18.2■□□□□ 0.5
PRPF40B-201ENST00000261897 RDXP35241 583 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-201ENST00000261897 MYSM1Q5VVJ2 828 aa18.19■□□□□ 0.5
PRPF40B-201ENST00000261897 EXOC4Q96A65 974 aa18.19■□□□□ 0.5
PRPF40B-201ENST00000261897 PHLPP2Q6ZVD8 1323 aa18.19■□□□□ 0.5
PRPF40B-201ENST00000261897 NUP133Q8WUM0 1156 aa18.19■□□□□ 0.5
PRPF40B-201ENST00000261897 KNDC1Q76NI1 1749 aa18.19■□□□□ 0.5
PRPF40B-201ENST00000261897 NCAPH2Q6IBW4 605 aa18.19■□□□□ 0.5
PRPF40B-201ENST00000261897 EFCC1Q9HA90 598 aa18.19■□□□□ 0.5
PRPF40B-201ENST00000261897 UHRF1BP1LA0JNW5 1464 aa18.19■□□□□ 0.5
PRPF40B-201ENST00000261897 A0A0U1RQJ8 604 aa18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 FILIP1LQ4L180 1135 aa18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 LINC00301Q8NCQ3 95 aa18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 ATRIPQ8WXE1 791 aa18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 PPM1EQ8WY54 764 aa18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 RABGGTAQ92696 567 aa18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 SLF1Q9BQI6 1058 aa18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 VWA3AA6NCI4 1184 aa18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 PRC1O43663 620 aa18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 KIAA0754O94854 1291 aa18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 FAM212AQ96EL1 285 aa18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 FUT8Q9BYC5 575 aa18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 SAMSN1Q9NSI8 373 aaKnown RBP18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 ZRANB2O95218 330 aaKnown RBP eCLIP18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 IFIT1P09914 478 aaKnown RBP18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 NAA16Q6N069 864 aaPredicted RBP18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 STOX1Q6ZVD7 989 aa18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 PACS2Q86VP3 889 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms