RNA–Protein interactions for RNA: ENST00000261692.6

CDK2AP1-201, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK2AP1, Length 1,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-201ENST00000261692 ZNRF3Q9ULT6 936 aa29.21■■■□□ 2.27
CDK2AP1-201ENST00000261692 HMG20BQ9P0W2 317 aa29.2■■■□□ 2.27
CDK2AP1-201ENST00000261692 SCARF1Q14162 830 aa29.2■■■□□ 2.26
CDK2AP1-201ENST00000261692 PRELPP51888 382 aa29.19■■■□□ 2.26
CDK2AP1-201ENST00000261692 WDR66Q8TBY9 1149 aa29.18■■■□□ 2.26
CDK2AP1-201ENST00000261692 DNAJC2Q99543 621 aaKnown RBP29.18■■■□□ 2.26
CDK2AP1-201ENST00000261692 ANP32EQ9BTT0 268 aa29.18■■■□□ 2.26
CDK2AP1-201ENST00000261692 FAM205AQ6ZU69 1335 aa29.17■■■□□ 2.26
CDK2AP1-201ENST00000261692 TTC22Q5TAA0 569 aa29.17■■■□□ 2.26
CDK2AP1-201ENST00000261692 CHAF1AQ13111 956 aaPredicted RBP29.16■■■□□ 2.26
CDK2AP1-201ENST00000261692 TTF1Q15361 905 aaPredicted RBP29.16■■■□□ 2.26
CDK2AP1-201ENST00000261692 TTLL5Q6EMB2 1281 aa29.16■■■□□ 2.26
CDK2AP1-201ENST00000261692 ZGPATQ8N5A5 531 aaKnown RBP29.16■■■□□ 2.26
CDK2AP1-201ENST00000261692 TBC1D22AQ8WUA7 517 aa29.16■■■□□ 2.26
CDK2AP1-201ENST00000261692 COL4A5P29400 1685 aa29.16■■■□□ 2.26
CDK2AP1-201ENST00000261692 YDJCA8MPS7 323 aa29.16■■■□□ 2.26
CDK2AP1-201ENST00000261692 ZAP70P43403 619 aa29.16■■■□□ 2.26
CDK2AP1-201ENST00000261692 GTF2IP78347 998 aa29.16■■■□□ 2.26
CDK2AP1-201ENST00000261692 STRIP1Q5VSL9 837 aa29.16■■■□□ 2.26
CDK2AP1-201ENST00000261692 PI16Q6UXB8 463 aa29.16■■■□□ 2.26
CDK2AP1-201ENST00000261692 SNRKQ9NRH2 765 aa29.16■■■□□ 2.26
CDK2AP1-201ENST00000261692 RNF181Q9P0P0 153 aa29.16■■■□□ 2.26
CDK2AP1-201ENST00000261692 COL1A1P02452 1464 aaPredicted RBP29.15■■■□□ 2.26
CDK2AP1-201ENST00000261692 USP17L3A6NCW0 530 aa29.15■■■□□ 2.26
CDK2AP1-201ENST00000261692 USP17L4A6NCW7 530 aa29.15■■■□□ 2.26
CDK2AP1-201ENST00000261692 USP17L1Q7RTZ2 530 aa29.15■■■□□ 2.26
CDK2AP1-201ENST00000261692 PAG1Q9NWQ8 432 aa29.15■■■□□ 2.26
CDK2AP1-201ENST00000261692 SALL1Q9NSC2 1324 aa29.14■■■□□ 2.26
CDK2AP1-201ENST00000261692 FZD9O00144 591 aa29.14■■■□□ 2.26
CDK2AP1-201ENST00000261692 EIF6P56537 245 aaKnown RBP29.13■■■□□ 2.25
CDK2AP1-201ENST00000261692 C9orf131Q5VYM1 1079 aa29.13■■■□□ 2.25
CDK2AP1-201ENST00000261692 FBXW7Q969H0 707 aa29.13■■■□□ 2.25
CDK2AP1-201ENST00000261692 GOLIM4O00461 696 aa29.12■■■□□ 2.25
CDK2AP1-201ENST00000261692 CYP2E1P05181 493 aaPredicted RBP29.12■■■□□ 2.25
CDK2AP1-201ENST00000261692 FKBP1AP62942 108 aaKnown RBP29.12■■■□□ 2.25
CDK2AP1-201ENST00000261692 BMP2KLQ5H9B9 411 aa29.12■■■□□ 2.25
CDK2AP1-201ENST00000261692 CNTROBQ8N137 903 aa29.12■■■□□ 2.25
CDK2AP1-201ENST00000261692 TRIM6-TRIM34B2RNG4 842 aa29.12■■■□□ 2.25
CDK2AP1-201ENST00000261692 IGSF3O75054 1194 aa29.12■■■□□ 2.25
CDK2AP1-201ENST00000261692 GSPT1P15170 499 aaKnown RBP29.12■■■□□ 2.25
CDK2AP1-201ENST00000261692 EVI5LQ96CN4 794 aa29.12■■■□□ 2.25
CDK2AP1-201ENST00000261692 NDUFB9Q9Y6M9 179 aa29.12■■■□□ 2.25
CDK2AP1-201ENST00000261692 TNIP1Q15025 636 aa29.11■■■□□ 2.25
CDK2AP1-201ENST00000261692 MFSD14BQ5SR56 506 aa29.11■■■□□ 2.25
CDK2AP1-201ENST00000261692 JAG2Q9Y219 1238 aa29.11■■■□□ 2.25
CDK2AP1-201ENST00000261692 ZC3H4Q9UPT8 1303 aaKnown RBP29.11■■■□□ 2.25
CDK2AP1-201ENST00000261692 AKAP11Q9UKA4 1901 aa29.1■■■□□ 2.25
CDK2AP1-201ENST00000261692 RAD17O75943 681 aa29.1■■■□□ 2.25
CDK2AP1-201ENST00000261692 SPTY2D1Q68D10 685 aaPredicted RBP29.1■■■□□ 2.25
CDK2AP1-201ENST00000261692 CIAPIN1Q6FI81 312 aa29.1■■■□□ 2.25
CDK2AP1-201ENST00000261692 KCNQ5Q9NR82 932 aa29.1■■■□□ 2.25
CDK2AP1-201ENST00000261692 SUGT1Q9Y2Z0 365 aa29.1■■■□□ 2.25
CDK2AP1-201ENST00000261692 SBF1O95248 1867 aa29.1■■■□□ 2.25
CDK2AP1-201ENST00000261692 CXCL9Q07325 125 aa29.09■■■□□ 2.25
CDK2AP1-201ENST00000261692 DACT2Q5SW24 774 aa29.09■■■□□ 2.25
CDK2AP1-201ENST00000261692 ABCF2Q9UG63 623 aa29.09■■■□□ 2.25
CDK2AP1-201ENST00000261692 MYH13Q9UKX3 1938 aa29.09■■■□□ 2.25
CDK2AP1-201ENST00000261692 MYO3BQ8WXR4 1341 aa29.09■■■□□ 2.25
CDK2AP1-201ENST00000261692 MAP4K4O95819 1239 aaPredicted RBP29.09■■■□□ 2.25
CDK2AP1-201ENST00000261692 ANTXR1Q9H6X2 564 aa29.09■■■□□ 2.25
CDK2AP1-201ENST00000261692 RBM19Q9Y4C8 960 aaKnown RBP29.09■■■□□ 2.25
CDK2AP1-201ENST00000261692 DICER1Q9UPY3 1922 aaKnown RBP29.08■■■□□ 2.25
CDK2AP1-201ENST00000261692 PSMD14O00487 310 aa29.08■■■□□ 2.25
CDK2AP1-201ENST00000261692 VIL1P09327 827 aaKnown RBP29.08■■■□□ 2.25
CDK2AP1-201ENST00000261692 LRRFIP1Q32MZ4 808 aaKnown RBP29.08■■■□□ 2.25
CDK2AP1-201ENST00000261692 TICAM2Q86XR7 235 aa29.08■■■□□ 2.25
CDK2AP1-201ENST00000261692 KBTBD3Q8NAB2 608 aa29.08■■■□□ 2.25
CDK2AP1-201ENST00000261692 RILPL2Q969X0 211 aa29.08■■■□□ 2.25
CDK2AP1-201ENST00000261692 EDC3Q96F86 508 aaKnown RBP29.08■■■□□ 2.25
CDK2AP1-201ENST00000261692 LRP2BPQ9P2M1 347 aa29.08■■■□□ 2.25
CDK2AP1-201ENST00000261692 CHD4Q14839 1912 aa29.07■■■□□ 2.24
CDK2AP1-201ENST00000261692 ERICH6Q7L0X2 663 aa29.07■■■□□ 2.24
CDK2AP1-201ENST00000261692 CCDC88AQ3V6T2 1871 aa29.07■■■□□ 2.24
CDK2AP1-201ENST00000261692 MAP3K12Q12852 859 aa29.06■■■□□ 2.24
CDK2AP1-201ENST00000261692 RSBN1LQ6PCB5 846 aaPredicted RBP29.06■■■□□ 2.24
CDK2AP1-201ENST00000261692 TBC1D9Q6ZT07 1266 aa29.06■■■□□ 2.24
CDK2AP1-201ENST00000261692 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.06■■■□□ 2.24
CDK2AP1-201ENST00000261692 SCN9AQ15858 1988 aa29.06■■■□□ 2.24
CDK2AP1-201ENST00000261692 LDHBP07195 334 aaKnown RBP29.05■■■□□ 2.24
CDK2AP1-201ENST00000261692 SDSP20132 328 aa29.05■■■□□ 2.24
CDK2AP1-201ENST00000261692 FSD1Q9BTV5 496 aa29.05■■■□□ 2.24
CDK2AP1-201ENST00000261692 PIH1D3Q9NQM4 214 aaKnown RBP29.05■■■□□ 2.24
CDK2AP1-201ENST00000261692 IDH1O75874 414 aaKnown RBP29.05■■■□□ 2.24
CDK2AP1-201ENST00000261692 TMED8Q6PL24 325 aaPredicted RBP29.05■■■□□ 2.24
CDK2AP1-201ENST00000261692 ZSCAN25Q6NSZ9 544 aa29.04■■■□□ 2.24
CDK2AP1-201ENST00000261692 AGBL3Q8NEM8 1001 aa29.04■■■□□ 2.24
CDK2AP1-201ENST00000261692 PRDX5P30044 214 aa29.03■■■□□ 2.24
CDK2AP1-201ENST00000261692 RAI14Q9P0K7 980 aa29.03■■■□□ 2.24
CDK2AP1-201ENST00000261692 RPS12P25398 132 aaKnown RBP29.02■■■□□ 2.24
CDK2AP1-201ENST00000261692 GPC2Q8N158 579 aa29.02■■■□□ 2.24
CDK2AP1-201ENST00000261692 CERS5Q8N5B7 392 aa29.02■■■□□ 2.24
CDK2AP1-201ENST00000261692 MAST3O60307 1309 aa29.02■■■□□ 2.24
CDK2AP1-201ENST00000261692 ZNF541Q9H0D2 1346 aa29.02■■■□□ 2.24
CDK2AP1-201ENST00000261692 RFX7Q2KHR2 1363 aa29.02■■■□□ 2.24
CDK2AP1-201ENST00000261692 PSME4Q14997 1843 aa29.02■■■□□ 2.24
CDK2AP1-201ENST00000261692 DZIP1Q86YF9 867 aaKnown RBP29.02■■■□□ 2.24
CDK2AP1-201ENST00000261692 TIAM2Q8IVF5 1701 aa29.01■■■□□ 2.23
CDK2AP1-201ENST00000261692 ZFYP08048 801 aaPredicted RBP29.01■■■□□ 2.23
CDK2AP1-201ENST00000261692 DPY19L2Q6NUT2 758 aa29.01■■■□□ 2.23
CDK2AP1-201ENST00000261692 MXD3Q9BW11 206 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms