RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 GJB4Q9NTQ9 266 aa16.93■□□□□ 0.3
SFSWAP-201ENST00000261674 PAG1Q9NWQ8 432 aa16.93■□□□□ 0.3
SFSWAP-201ENST00000261674 LRRC37A3O60309 1634 aa16.93■□□□□ 0.3
SFSWAP-201ENST00000261674 GTF2F1P35269 517 aaKnown RBP eCLIP16.92■□□□□ 0.39e-11■■■■■ 43.8
SFSWAP-201ENST00000261674 CCDC24Q8N4L8 307 aa16.92■□□□□ 0.3
SFSWAP-201ENST00000261674 AOPEPQ8N6M6 819 aa16.92■□□□□ 0.3
SFSWAP-201ENST00000261674 KBTBD3Q8NAB2 608 aa16.92■□□□□ 0.3
SFSWAP-201ENST00000261674 TDRD7Q8NHU6 1098 aaKnown RBP16.92■□□□□ 0.3
SFSWAP-201ENST00000261674 IFIT1P09914 478 aaKnown RBP16.92■□□□□ 0.3
SFSWAP-201ENST00000261674 UTYO14607 1347 aa16.92■□□□□ 0.3
SFSWAP-201ENST00000261674 USP27XA6NNY8 438 aa16.92■□□□□ 0.3
SFSWAP-201ENST00000261674 SKILP12757 684 aa16.92■□□□□ 0.3
SFSWAP-201ENST00000261674 NKX1-1Q15270 411 aaPredicted RBP16.92■□□□□ 0.3
SFSWAP-201ENST00000261674 LRRC24Q50LG9 513 aa16.92■□□□□ 0.3
SFSWAP-201ENST00000261674 TRPC5Q9UL62 973 aaPredicted RBP16.92■□□□□ 0.3
SFSWAP-201ENST00000261674 PLA2G4DQ86XP0 818 aa16.91■□□□□ 0.3
SFSWAP-201ENST00000261674 HAUS7Q99871 368 aa16.91■□□□□ 0.3
SFSWAP-201ENST00000261674 RFX5P48382 616 aaPredicted RBP16.91■□□□□ 0.3
SFSWAP-201ENST00000261674 USPL1Q5W0Q7 1092 aa16.91■□□□□ 0.3
SFSWAP-201ENST00000261674 SMAP1Q8IYB5 467 aaPredicted RBP16.91■□□□□ 0.3
SFSWAP-201ENST00000261674 CTDNEP1O95476 244 aa16.91■□□□□ 0.3
SFSWAP-201ENST00000261674 HEG1Q9ULI3 1381 aa16.9■□□□□ 0.3
SFSWAP-201ENST00000261674 E7EWF7 191 aa16.9■□□□□ 0.3
SFSWAP-201ENST00000261674 STK38Q15208 465 aa16.9■□□□□ 0.3
SFSWAP-201ENST00000261674 STX1AQ16623 288 aa16.9■□□□□ 0.3
SFSWAP-201ENST00000261674 TSGA10IPQ3SY00 556 aa16.9■□□□□ 0.3
SFSWAP-201ENST00000261674 ZNF396Q96N95 335 aaPredicted RBP16.9■□□□□ 0.3
SFSWAP-201ENST00000261674 LOC102724428A0A0B4J2F2 783 aa16.89■□□□□ 0.29
SFSWAP-201ENST00000261674 SMC2O95347 1197 aa16.89■□□□□ 0.29
SFSWAP-201ENST00000261674 HSPD1P10809 573 aaKnown RBP16.89■□□□□ 0.29
SFSWAP-201ENST00000261674 SIK1P57059 783 aa16.89■□□□□ 0.29
SFSWAP-201ENST00000261674 ITPK1Q13572 414 aa16.89■□□□□ 0.29
SFSWAP-201ENST00000261674 CEP135Q66GS9 1140 aa16.89■□□□□ 0.29
SFSWAP-201ENST00000261674 PUS3Q9BZE2 481 aaKnown RBP16.89■□□□□ 0.29
SFSWAP-201ENST00000261674 SLIT2O94813 1529 aa16.89■□□□□ 0.29
SFSWAP-201ENST00000261674 PFKFB2O60825 505 aa16.89■□□□□ 0.29
SFSWAP-201ENST00000261674 CCDC69A6NI79 296 aa16.89■□□□□ 0.29
SFSWAP-201ENST00000261674 CPLX1O14810 134 aa16.89■□□□□ 0.29
SFSWAP-201ENST00000261674 PTPN14Q15678 1187 aa16.89■□□□□ 0.29
SFSWAP-201ENST00000261674 HLFQ16534 295 aa16.89■□□□□ 0.29
SFSWAP-201ENST00000261674 LRRC8AQ8IWT6 810 aa16.89■□□□□ 0.29
SFSWAP-201ENST00000261674 IQCB1Q15051 598 aa16.88■□□□□ 0.29
SFSWAP-201ENST00000261674 PRDM4Q9UKN5 801 aa16.88■□□□□ 0.29
SFSWAP-201ENST00000261674 THRAP3Q9Y2W1 955 aaKnown RBP16.88■□□□□ 0.29
SFSWAP-201ENST00000261674 CEP57L1Q8IYX8 460 aa16.88■□□□□ 0.29
SFSWAP-201ENST00000261674 RCOR1Q9UKL0 485 aa16.88■□□□□ 0.29
SFSWAP-201ENST00000261674 STARD3NLO95772 234 aa16.87■□□□□ 0.29
SFSWAP-201ENST00000261674 HMGB1P09429 215 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-201ENST00000261674 PDIA3P30101 505 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-201ENST00000261674 NCBP1Q09161 790 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-201ENST00000261674 ALDH8A1Q9H2A2 487 aaPredicted RBP16.87■□□□□ 0.29
SFSWAP-201ENST00000261674 ANO10Q9NW15 660 aa16.87■□□□□ 0.29
SFSWAP-201ENST00000261674 ADD1P35611 737 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-201ENST00000261674 TAF7LQ5H9L4 462 aa16.87■□□□□ 0.29
SFSWAP-201ENST00000261674 STK11IPQ8N1F8 1099 aa16.87■□□□□ 0.29
SFSWAP-201ENST00000261674 PCDHA7Q9UN72 937 aa16.87■□□□□ 0.29
SFSWAP-201ENST00000261674 A0A1B0GUL7 405 aa16.87■□□□□ 0.29
SFSWAP-201ENST00000261674 BARGINQ6ZT62 677 aa16.87■□□□□ 0.29
SFSWAP-201ENST00000261674 COL14A1Q05707 1796 aaKnown RBP16.86■□□□□ 0.29
SFSWAP-201ENST00000261674 SMTNL1A8MU46 457 aa16.86■□□□□ 0.29
SFSWAP-201ENST00000261674 RXRAP19793 462 aa16.86■□□□□ 0.29
SFSWAP-201ENST00000261674 MARCKSP29966 332 aaPredicted RBP16.86■□□□□ 0.29
SFSWAP-201ENST00000261674 FAM160A1Q05DH4 1040 aa16.86■□□□□ 0.29
SFSWAP-201ENST00000261674 RBM43Q6ZSC3 357 aaKnown RBP16.86■□□□□ 0.29
SFSWAP-201ENST00000261674 C8orf76Q96K31 380 aa16.86■□□□□ 0.29
SFSWAP-201ENST00000261674 ZSCAN20P17040 1043 aaPredicted RBP16.86■□□□□ 0.29
SFSWAP-201ENST00000261674 FAM89AQ96GI7 184 aa16.86■□□□□ 0.29
SFSWAP-201ENST00000261674 CLIC4Q9Y696 253 aa16.86■□□□□ 0.29
SFSWAP-201ENST00000261674 APPP05067 770 aa16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 SYNE3Q6ZMZ3 975 aa16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 SMARCC2Q8TAQ2 1214 aa16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 CEP126Q9P2H0 1117 aa16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 KLF18A0A0U1RQI7 1052 aa16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 CTAGE5O15320 804 aa16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 NDUFA8P51970 172 aa16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 SNW1Q13573 536 aaKnown RBP16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 PTPN21Q16825 1174 aa16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 PI16Q6UXB8 463 aa16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 ORC3Q9UBD5 711 aaPredicted RBP16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 DISP2A7MBM2 1401 aa16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 GOLGA8BA8MQT2 603 aa16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 CRKLP46109 303 aaKnown RBP16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 NAA16Q6N069 864 aaPredicted RBP16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 MRPS27Q92552 414 aaKnown RBP16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 OSBP2Q969R2 916 aa16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 CDCA7Q9BWT1 371 aaPredicted RBP16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 MAST3O60307 1309 aa16.85■□□□□ 0.29
SFSWAP-201ENST00000261674 M0R2C6 588 aa16.84■□□□□ 0.29
SFSWAP-201ENST00000261674 GNL2Q13823 731 aaKnown RBP16.84■□□□□ 0.29
SFSWAP-201ENST00000261674 LLPHQ9BRT6 129 aaKnown RBP16.84■□□□□ 0.29
SFSWAP-201ENST00000261674 CWC25Q9NXE8 425 aaPredicted RBP16.84■□□□□ 0.29
SFSWAP-201ENST00000261674 RNF113AO15541 343 aaKnown RBP16.84■□□□□ 0.29
SFSWAP-201ENST00000261674 TTC39AQ5SRH9 613 aa16.84■□□□□ 0.29
SFSWAP-201ENST00000261674 ATG9AQ7Z3C6 839 aa16.84■□□□□ 0.29
SFSWAP-201ENST00000261674 TMC6Q7Z403 805 aa16.84■□□□□ 0.29
SFSWAP-201ENST00000261674 PLBD2Q8NHP8 589 aa16.84■□□□□ 0.29
SFSWAP-201ENST00000261674 ZNF215Q9UL58 517 aaPredicted RBP16.84■□□□□ 0.29
SFSWAP-201ENST00000261674 PALLDQ8WX93 1383 aa16.84■□□□□ 0.29
SFSWAP-201ENST00000261674 CYP19A1P11511 503 aaPredicted RBP16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms