RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 VPS52Q8N1B4 723 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 ANKRD24Q8TF21 1146 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 HIP1RO75146 1068 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 CCDC174Q6PII3 467 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 BICDL2A1A5D9 508 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 UTP11Q9Y3A2 253 aaKnown RBP8.07□□□□□ -1.12
HERC2-201ENST00000261609 STAT6P42226 847 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 NUTM2AQ8IVF1 878 aaPredicted RBP8.07□□□□□ -1.12
HERC2-201ENST00000261609 BIRC2Q13490 618 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 MICU3Q86XE3 530 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 CCDC110Q8TBZ0 833 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 MBIPQ9NS73 344 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 COG7P83436 770 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 IFIT5Q13325 482 aaKnown RBP8.06□□□□□ -1.12
HERC2-201ENST00000261609 PPP1R7Q15435 360 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 CYP26C1Q6V0L0 522 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 SND1Q7KZF4 910 aaKnown RBP eCLIP8.06□□□□□ -1.12
HERC2-201ENST00000261609 CCDC25Q86WR0 208 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 EFCAB13Q8IY85 973 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 MAGEA9P43362 315 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 CAVIN4Q5BKX8 364 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 FERMT2Q96AC1 680 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 GDAP1L1Q96MZ0 367 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 SPTLC2O15270 562 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 ATP5DP30049 168 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 SH3BGRP55822 239 aaPredicted RBP8.06□□□□□ -1.12
HERC2-201ENST00000261609 TNNC1P63316 161 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 IRX5P78411 483 aaPredicted RBP8.06□□□□□ -1.12
HERC2-201ENST00000261609 ZNF215Q9UL58 517 aaPredicted RBP8.06□□□□□ -1.12
HERC2-201ENST00000261609 TERF2Q15554 542 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 MUM1Q2TAK8 710 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 GRIPAP1Q4V328 841 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 MIER3Q7Z3K6 550 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 MKNK2Q9HBH9 465 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 FLIIQ13045 1269 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 ATL3Q6DD88 541 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 NPHP3Q7Z494 1330 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 N4BP2L2Q92802 583 aaPredicted RBP8.06□□□□□ -1.12
HERC2-201ENST00000261609 ARID5AQ03989 594 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 Q6ZUG5 572 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 TXNDC2Q86VQ3 553 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 GADD45BO75293 160 aaPredicted RBP8.06□□□□□ -1.12
HERC2-201ENST00000261609 GIGYF1O75420 1035 aaPredicted RBP8.06□□□□□ -1.12
HERC2-201ENST00000261609 SPAG5Q96R06 1193 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 MED4Q9NPJ6 270 aa8.06□□□□□ -1.12
HERC2-201ENST00000261609 MTRF1LQ9UGC7 380 aaKnown RBP8.06□□□□□ -1.12
HERC2-201ENST00000261609 HGSO14964 777 aaPredicted RBP8.06□□□□□ -1.12
HERC2-201ENST00000261609 EFCAB8A8MWE9 144 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 SYCP3Q8IZU3 236 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 ATP2A1O14983 1001 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 KRT13P13646 458 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 IDEP14735 1019 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 ERCC3P19447 782 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 RTN1Q16799 776 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 PHLDB3Q6NSJ2 640 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.05□□□□□ -1.122e-6■■□□□ 12.2
HERC2-201ENST00000261609 FAM71BQ8TC56 605 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 STAG1Q8WVM7 1258 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 EHMT1Q9H9B1 1298 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 RASSF2P50749 326 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 FANCCQ00597 558 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 ZNF444Q8N0Y2 327 aaPredicted RBP8.05□□□□□ -1.12
HERC2-201ENST00000261609 KRT23Q9C075 422 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 PIK3R4Q99570 1358 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 RBM5P52756 815 aaKnown RBP eCLIP8.05□□□□□ -1.12
HERC2-201ENST00000261609 PPANQ9NQ55 473 aaKnown RBP8.05□□□□□ -1.12
HERC2-201ENST00000261609 DBF4Q9UBU7 674 aaPredicted RBP8.05□□□□□ -1.12
HERC2-201ENST00000261609 MRFAP1Q9Y605 127 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 TMEM110-MUSTN1A8MSY1 372 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 PPFIA2O75334 1257 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 VSIG1Q86XK7 387 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 CCDC85AQ96PX6 553 aaPredicted RBP8.05□□□□□ -1.12
HERC2-201ENST00000261609 TBCAO75347 108 aaKnown RBP8.05□□□□□ -1.12
HERC2-201ENST00000261609 TRIM14Q14142 442 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 MYD88Q99836 296 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 MMRN2Q9H8L6 949 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 CCDC144CPQ8IYA2 1237 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 ERMNQ8TAM6 284 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 F6X3S4 739 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 STARD3NLO95772 234 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 MCUR1Q96AQ8 359 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 PDE1AP54750 535 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 GSTA5Q7RTV2 222 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 ALG1Q9BT22 464 aa8.05□□□□□ -1.12
HERC2-201ENST00000261609 ABTB1Q969K4 478 aaPredicted RBP8.05□□□□□ -1.12
HERC2-201ENST00000261609 LARSQ9P2J5 1176 aaKnown RBP8.05□□□□□ -1.12
HERC2-201ENST00000261609 DDX41Q9UJV9 622 aaKnown RBP8.05□□□□□ -1.12
HERC2-201ENST00000261609 TMCO4Q5TGY1 634 aa8.04□□□□□ -1.12
HERC2-201ENST00000261609 NUCKS1Q9H1E3 243 aaKnown RBP8.04□□□□□ -1.12
HERC2-201ENST00000261609 CLSTN2Q9H4D0 955 aa8.04□□□□□ -1.12
HERC2-201ENST00000261609 TTF2Q9UNY4 1162 aaKnown RBP8.04□□□□□ -1.12
HERC2-201ENST00000261609 ASIC1P78348 528 aa8.04□□□□□ -1.12
HERC2-201ENST00000261609 MTX1Q13505 466 aa8.04□□□□□ -1.12
HERC2-201ENST00000261609 ZMAT2Q96NC0 199 aaKnown RBP8.04□□□□□ -1.12
HERC2-201ENST00000261609 LRRC2Q9BYS8 371 aa8.04□□□□□ -1.12
HERC2-201ENST00000261609 RAD50Q92878 1312 aa8.04□□□□□ -1.12
HERC2-201ENST00000261609 RBM8AQ9Y5S9 174 aaKnown RBP8.04□□□□□ -1.12
HERC2-201ENST00000261609 SYNJ1O43426 1573 aa8.04□□□□□ -1.12
HERC2-201ENST00000261609 ATP8B1O43520 1251 aa8.04□□□□□ -1.12
HERC2-201ENST00000261609 RALGAPBQ86X10 1494 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms