RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 IRX2Q9BZI1 471 aaPredicted RBP11.62□□□□□ -0.55
PALB2-201ENST00000261584 GUCA1BQ9UMX6 200 aa11.62□□□□□ -0.55
PALB2-201ENST00000261584 KIAA0232Q92628 1395 aa11.62□□□□□ -0.55
PALB2-201ENST00000261584 KIF5CO60282 957 aa11.62□□□□□ -0.55
PALB2-201ENST00000261584 NEMFO60524 1076 aa11.62□□□□□ -0.55
PALB2-201ENST00000261584 GIGYF1O75420 1035 aaPredicted RBP11.62□□□□□ -0.55
PALB2-201ENST00000261584 UBAC1Q9BSL1 405 aa11.62□□□□□ -0.55
PALB2-201ENST00000261584 CTNNA3Q9UI47 895 aa11.62□□□□□ -0.55
PALB2-201ENST00000261584 TMEM232C9JQI7 657 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 PFKFB1P16118 471 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 PPP2R3AQ06190 1150 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 GCKRQ14397 625 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 TSPYL1Q9H0U9 437 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 VPS16Q9H269 839 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 IQGAP3Q86VI3 1631 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 MYO5CQ9NQX4 1742 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 GCP02774 474 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 SMARCE1Q969G3 411 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 ZHX3Q9H4I2 956 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 N4BP3O15049 544 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 CCDC150Q8NCX0 1101 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 NCOA7Q8NI08 942 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 PPP1R13BQ96KQ4 1090 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 KIAA1468Q9P260 1216 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 NFE2L3Q9Y4A8 694 aa11.61□□□□□ -0.55
PALB2-201ENST00000261584 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.61□□□□□ -0.55
PALB2-201ENST00000261584 MAP3K4Q9Y6R4 1608 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 ALDH1L1O75891 902 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 SSBP05455 408 aaKnown RBP eCLIP11.6□□□□□ -0.55
PALB2-201ENST00000261584 ADORA1P30542 326 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 CLCN6P51797 869 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 EIF5P55010 431 aaKnown RBP11.6□□□□□ -0.55
PALB2-201ENST00000261584 IFIT5Q13325 482 aaKnown RBP11.6□□□□□ -0.55
PALB2-201ENST00000261584 TTLL7Q6ZT98 887 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 KIAA1328Q86T90 577 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 RUFY1Q96T51 708 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 BAG1Q99933 345 aaPredicted RBP11.6□□□□□ -0.55
PALB2-201ENST00000261584 ATP2C2O75185 946 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 ZAP70P43403 619 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 CTDSPL2Q05D32 466 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 AKAP4Q5JQC9 854 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 ANO1Q5XXA6 986 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 NSUN7Q8NE18 718 aaKnown RBP11.6□□□□□ -0.55
PALB2-201ENST00000261584 TDRD7Q8NHU6 1098 aaKnown RBP11.6□□□□□ -0.55
PALB2-201ENST00000261584 ROBO2Q9HCK4 1378 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 ZBTB43O43298 467 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 HMGB1P09429 215 aaKnown RBP11.6□□□□□ -0.55
PALB2-201ENST00000261584 RNASE9P60153 205 aaKnown RBP11.6□□□□□ -0.55
PALB2-201ENST00000261584 ZNF790Q6PG37 636 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 KCNG4Q8TDN1 519 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 CABP5Q9NP86 173 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 PRDM11Q9NQV5 511 aa11.6□□□□□ -0.55
PALB2-201ENST00000261584 DDX21Q9NR30 783 aaKnown RBP eCLIP11.6□□□□□ -0.55
PALB2-201ENST00000261584 ST3GAL1Q11201 340 aa11.59□□□□□ -0.55
PALB2-201ENST00000261584 SART3Q15020 963 aaKnown RBP11.59□□□□□ -0.55
PALB2-201ENST00000261584 TTC19Q6DKK2 380 aaPredicted RBP11.59□□□□□ -0.55
PALB2-201ENST00000261584 MPHOSPH8Q99549 860 aa11.59□□□□□ -0.55
PALB2-201ENST00000261584 TANGO6Q9C0B7 1094 aa11.59□□□□□ -0.55
PALB2-201ENST00000261584 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.59□□□□□ -0.55
PALB2-201ENST00000261584 CWC15Q9P013 229 aaKnown RBP11.59□□□□□ -0.55
PALB2-201ENST00000261584 HSPD1P10809 573 aaKnown RBP11.59□□□□□ -0.55
PALB2-201ENST00000261584 RESTQ13127 1097 aa11.59□□□□□ -0.55
PALB2-201ENST00000261584 SPTLC3Q9NUV7 552 aa11.59□□□□□ -0.55
PALB2-201ENST00000261584 NEURL1BA8MQ27 555 aa11.59□□□□□ -0.55
PALB2-201ENST00000261584 KIF2AO00139 706 aaPredicted RBP11.59□□□□□ -0.55
PALB2-201ENST00000261584 FOXN1O15353 648 aa11.59□□□□□ -0.55
PALB2-201ENST00000261584 PDIA3P30101 505 aaKnown RBP11.59□□□□□ -0.55
PALB2-201ENST00000261584 MYL5Q02045 173 aa11.59□□□□□ -0.55
PALB2-201ENST00000261584 THEMISQ8N1K5 641 aaPredicted RBP11.59□□□□□ -0.55
PALB2-201ENST00000261584 TM6SF1Q9BZW5 370 aa11.59□□□□□ -0.55
PALB2-201ENST00000261584 BLZF1Q9H2G9 400 aa11.59□□□□□ -0.55
PALB2-201ENST00000261584 MYOM2P54296 1465 aa11.59□□□□□ -0.55
PALB2-201ENST00000261584 PNPLA6Q8IY17 1366 aa11.58□□□□□ -0.55
PALB2-201ENST00000261584 UBE2Q2LH0YL09 131 aa11.58□□□□□ -0.55
PALB2-201ENST00000261584 ZPR1O75312 459 aa11.58□□□□□ -0.55
PALB2-201ENST00000261584 HNRNPH2P55795 449 aaKnown RBP11.58□□□□□ -0.55
PALB2-201ENST00000261584 SSRP1Q08945 709 aaKnown RBP11.58□□□□□ -0.55
PALB2-201ENST00000261584 PTPROQ16827 1216 aa11.58□□□□□ -0.55
PALB2-201ENST00000261584 NCBP3Q53F19 620 aaKnown RBP11.58□□□□□ -0.55
PALB2-201ENST00000261584 POLD4Q9HCU8 107 aa11.58□□□□□ -0.55
PALB2-201ENST00000261584 CWC25Q9NXE8 425 aaPredicted RBP11.58□□□□□ -0.55
PALB2-201ENST00000261584 RNF113AO15541 343 aaKnown RBP11.58□□□□□ -0.56
PALB2-201ENST00000261584 WDHD1O75717 1129 aaPredicted RBP11.58□□□□□ -0.56
PALB2-201ENST00000261584 MYSM1Q5VVJ2 828 aa11.58□□□□□ -0.56
PALB2-201ENST00000261584 STOX1Q6ZVD7 989 aa11.58□□□□□ -0.56
PALB2-201ENST00000261584 DPF2Q92785 391 aa11.58□□□□□ -0.56
PALB2-201ENST00000261584 JADE2Q9NQC1 790 aa11.58□□□□□ -0.56
PALB2-201ENST00000261584 TRMT112Q9UI30 125 aaKnown RBP11.58□□□□□ -0.56
PALB2-201ENST00000261584 ZCCHC11Q5TAX3 1644 aaKnown RBP11.58□□□□□ -0.56
PALB2-201ENST00000261584 CCP110O43303 1012 aa11.58□□□□□ -0.56
PALB2-201ENST00000261584 SNRPA1P09661 255 aaKnown RBP11.58□□□□□ -0.56
PALB2-201ENST00000261584 KBTBD3Q8NAB2 608 aa11.58□□□□□ -0.56
PALB2-201ENST00000261584 DEF6Q9H4E7 631 aa11.58□□□□□ -0.56
PALB2-201ENST00000261584 DENND2AQ9ULE3 1009 aa11.58□□□□□ -0.56
PALB2-201ENST00000261584 ATF3P18847 181 aa11.57□□□□□ -0.56
PALB2-201ENST00000261584 CDC25AP30304 524 aa11.57□□□□□ -0.56
PALB2-201ENST00000261584 TERF2Q15554 542 aa11.57□□□□□ -0.56
PALB2-201ENST00000261584 ZNF174Q15697 407 aa11.57□□□□□ -0.56
PALB2-201ENST00000261584 AMOTQ4VCS5 1084 aa11.57□□□□□ -0.56
PALB2-201ENST00000261584 KRT40Q6A162 431 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms