RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ALDH1L1O75891 902 aa13.73□□□□□ -0.21
COL8A1-201ENST00000261037 CTAGE8P0CG41 777 aa13.73□□□□□ -0.21
COL8A1-201ENST00000261037 CTAGE6Q86UF2 777 aa13.73□□□□□ -0.21
COL8A1-201ENST00000261037 CTAGE4Q8IX94 777 aa13.73□□□□□ -0.21
COL8A1-201ENST00000261037 TCHPQ9BT92 498 aa13.73□□□□□ -0.21
COL8A1-201ENST00000261037 PAXBP1Q9Y5B6 917 aa13.73□□□□□ -0.21
COL8A1-201ENST00000261037 UBXN1Q04323 297 aa13.73□□□□□ -0.21
COL8A1-201ENST00000261037 SPECC1LQ69YQ0 1117 aa13.73□□□□□ -0.21
COL8A1-201ENST00000261037 CCDC155Q8N6L0 562 aa13.73□□□□□ -0.21
COL8A1-201ENST00000261037 BICC1Q9H694 974 aaKnown RBP13.73□□□□□ -0.21
COL8A1-201ENST00000261037 ZHX1Q9UKY1 873 aaPredicted RBP13.73□□□□□ -0.21
COL8A1-201ENST00000261037 SMIM23A6NLE4 172 aa13.73□□□□□ -0.21
COL8A1-201ENST00000261037 PSMA7O14818 248 aa13.73□□□□□ -0.21
COL8A1-201ENST00000261037 SPTLC2O15270 562 aa13.73□□□□□ -0.21
COL8A1-201ENST00000261037 CREB3L3Q68CJ9 461 aa13.73□□□□□ -0.21
COL8A1-201ENST00000261037 SPDYE3A6NKU9 549 aa13.73□□□□□ -0.21
COL8A1-201ENST00000261037 ABCA5Q8WWZ7 1642 aa13.73□□□□□ -0.21
COL8A1-201ENST00000261037 BMP15O95972 392 aa13.72□□□□□ -0.21
COL8A1-201ENST00000261037 NSFL1CQ9UNZ2 370 aaKnown RBP13.72□□□□□ -0.21
COL8A1-201ENST00000261037 MAPKBP1O60336 1514 aa13.72□□□□□ -0.21
COL8A1-201ENST00000261037 TRIM75PA6NK02 468 aa13.72□□□□□ -0.21
COL8A1-201ENST00000261037 BMS1Q14692 1282 aaKnown RBP13.72□□□□□ -0.21
COL8A1-201ENST00000261037 CEP85Q6P2H3 762 aa13.72□□□□□ -0.21
COL8A1-201ENST00000261037 SELENOOQ9BVL4 669 aa13.72□□□□□ -0.21
COL8A1-201ENST00000261037 PTPDC1A2A3K4 754 aa13.72□□□□□ -0.21
COL8A1-201ENST00000261037 UBAP1LF5GYI3 381 aa13.72□□□□□ -0.21
COL8A1-201ENST00000261037 BBXQ8WY36 941 aaPredicted RBP13.72□□□□□ -0.21
COL8A1-201ENST00000261037 SSX2IPQ9Y2D8 614 aa13.72□□□□□ -0.21
COL8A1-201ENST00000261037 MXRA7P84157 204 aa13.71□□□□□ -0.21
COL8A1-201ENST00000261037 SELENOSQ9BQE4 189 aa13.71□□□□□ -0.21
COL8A1-201ENST00000261037 RASAL2Q9UJF2 1139 aa13.71□□□□□ -0.21
COL8A1-201ENST00000261037 DISP1Q96F81 1524 aa13.71□□□□□ -0.21
COL8A1-201ENST00000261037 IL2RBP14784 551 aa13.71□□□□□ -0.21
COL8A1-201ENST00000261037 CPA1P15085 419 aa13.71□□□□□ -0.21
COL8A1-201ENST00000261037 GNAQP50148 359 aa13.71□□□□□ -0.21
COL8A1-201ENST00000261037 NOLC1Q14978 699 aaKnown RBP eCLIP13.71□□□□□ -0.21
COL8A1-201ENST00000261037 FAM200AQ8TCP9 573 aa13.71□□□□□ -0.21
COL8A1-201ENST00000261037 NYXQ9GZU5 481 aa13.71□□□□□ -0.21
COL8A1-201ENST00000261037 MCM6Q14566 821 aa13.71□□□□□ -0.21
COL8A1-201ENST00000261037 GRIPAP1Q4V328 841 aa13.71□□□□□ -0.21
COL8A1-201ENST00000261037 CCDC129Q6ZRS4 1044 aa13.71□□□□□ -0.21
COL8A1-201ENST00000261037 TFCP2L1Q9NZI6 479 aa13.71□□□□□ -0.21
COL8A1-201ENST00000261037 CALCOCO1Q9P1Z2 691 aa13.71□□□□□ -0.21
COL8A1-201ENST00000261037 CCDC63Q8NA47 563 aa13.71□□□□□ -0.22
COL8A1-201ENST00000261037 LZTFL1Q9NQ48 299 aa13.71□□□□□ -0.22
COL8A1-201ENST00000261037 PARP3Q9Y6F1 533 aa13.71□□□□□ -0.22
COL8A1-201ENST00000261037 KRT79Q5XKE5 535 aa13.71□□□□□ -0.22
COL8A1-201ENST00000261037 APBB1IPQ7Z5R6 666 aaPredicted RBP13.71□□□□□ -0.22
COL8A1-201ENST00000261037 GUCA1BQ9UMX6 200 aa13.71□□□□□ -0.22
COL8A1-201ENST00000261037 RIMS2Q9UQ26 1411 aa13.7□□□□□ -0.22
COL8A1-201ENST00000261037 GPATCH11Q8N954 259 aa13.7□□□□□ -0.22
COL8A1-201ENST00000261037 IPO4Q8TEX9 1081 aaKnown RBP13.7□□□□□ -0.22
COL8A1-201ENST00000261037 IQCGQ9H095 443 aaKnown RBP13.7□□□□□ -0.22
COL8A1-201ENST00000261037 TYRO3Q06418 890 aa13.7□□□□□ -0.22
COL8A1-201ENST00000261037 USP37Q86T82 979 aa13.7□□□□□ -0.22
COL8A1-201ENST00000261037 TACC1O75410 805 aa13.7□□□□□ -0.22
COL8A1-201ENST00000261037 RUFY3Q7L099 469 aa13.7□□□□□ -0.22
COL8A1-201ENST00000261037 TTC12Q9H892 705 aaPredicted RBP13.7□□□□□ -0.22
COL8A1-201ENST00000261037 MAP3K5Q99683 1374 aa13.7□□□□□ -0.22
COL8A1-201ENST00000261037 CTAGE9A4FU28 777 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 PRIM1P49642 420 aaKnown RBP13.69□□□□□ -0.22
COL8A1-201ENST00000261037 MAP3K9P80192 1104 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 ZNF174Q15697 407 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 PPM1EQ8WY54 764 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 LDHBP07195 334 aaKnown RBP13.69□□□□□ -0.22
COL8A1-201ENST00000261037 RLBP1P12271 317 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 DCAF17Q5H9S7 520 aaPredicted RBP13.69□□□□□ -0.22
COL8A1-201ENST00000261037 IMPG2Q9BZV3 1241 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 POLKQ9UBT6 870 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 CTNND2Q9UQB3 1225 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 RTCBQ9Y3I0 505 aaKnown RBP13.69□□□□□ -0.22
COL8A1-201ENST00000261037 CAVIN2O95810 425 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 EIF6P56537 245 aaKnown RBP13.69□□□□□ -0.22
COL8A1-201ENST00000261037 C8orf34Q49A92 452 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 NPHP3Q7Z494 1330 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 NCKAP5LQ9HCH0 1330 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 PRAG1Q86YV5 1406 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 MBD4O95243 580 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 PLCB3Q01970 1234 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 NEK11Q8NG66 645 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 ABCC1P33527 1531 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 EIF2AK4Q9P2K8 1649 aaKnown RBP13.69□□□□□ -0.22
COL8A1-201ENST00000261037 KIF4AO95239 1232 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 GNAT2P19087 354 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 C6orf163Q5TEZ5 329 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 GPCPD1Q9NPB8 672 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 IFNKQ9P0W0 207 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 DMRT2Q9Y5R5 561 aa13.69□□□□□ -0.22
COL8A1-201ENST00000261037 RAPGEF1Q13905 1077 aa13.68□□□□□ -0.22
COL8A1-201ENST00000261037 PLVAPQ9BX97 442 aa13.68□□□□□ -0.22
COL8A1-201ENST00000261037 ZC3H12CQ9C0D7 883 aaKnown RBP13.68□□□□□ -0.22
COL8A1-201ENST00000261037 TTC41PQ6P2S7 1318 aa13.68□□□□□ -0.22
COL8A1-201ENST00000261037 CHMP2AO43633 222 aa13.68□□□□□ -0.22
COL8A1-201ENST00000261037 RAB3GAP1Q15042 981 aa13.68□□□□□ -0.22
COL8A1-201ENST00000261037 IFT81Q8WYA0 676 aa13.68□□□□□ -0.22
COL8A1-201ENST00000261037 RSPH14Q9UHP6 348 aa13.68□□□□□ -0.22
COL8A1-201ENST00000261037 ZNF569Q5MCW4 686 aa13.68□□□□□ -0.22
COL8A1-201ENST00000261037 TPTE2Q6XPS3 522 aa13.68□□□□□ -0.22
COL8A1-201ENST00000261037 VWA3AA6NCI4 1184 aa13.67□□□□□ -0.22
COL8A1-201ENST00000261037 RHOXF2BP0C7M4 288 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms