RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 EDC4Q6P2E9 1401 aaKnown RBP15.33■□□□□ 0.04
TUBGCP4-201ENST00000260383 BRD2P25440 801 aaKnown RBP15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 FCHSD1Q86WN1 690 aa15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 VSTM4Q8IW00 320 aa15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 SMARCC2Q8TAQ2 1214 aa15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 SUFUQ9UMX1 484 aa15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 PIK3C2BO00750 1634 aa15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 DIP2CQ9Y2E4 1556 aa15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 CPS1P31327 1500 aa15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 CUTAO60888 179 aa15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 PPFIA4O75335 1185 aa15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 CTDNEP1O95476 244 aa15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 TOP1P11387 765 aaKnown RBP15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 USP5P45974 858 aa15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 TTLL5Q6EMB2 1281 aa15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 SRGAP1Q7Z6B7 1085 aa15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 CLIC6Q96NY7 704 aa15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 RAB21Q9UL25 225 aa15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 PA2G4Q9UQ80 394 aaKnown RBP15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 SIGLEC1Q9BZZ2 1709 aa15.32■□□□□ 0.04
TUBGCP4-201ENST00000260383 A0A087WUV0 522 aaPredicted RBP15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 WDHD1O75717 1129 aaPredicted RBP15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 EIF3JO75822 258 aaKnown RBP15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 SLC3A2P08195 630 aaKnown RBP15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 MAP2K2P36507 400 aa15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 CASP8Q14790 479 aa15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 DNAAF4Q8WXU2 420 aa15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 BAG1Q99933 345 aaPredicted RBP15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 A0A0U1RQJ8 604 aa15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 NUTM2FA1L443 756 aa15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 RHOXF2BP0C7M4 288 aa15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 LIG3P49916 1009 aa15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 VSNL1P62760 191 aa15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 MTX1Q13505 466 aa15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 NUTM2GQ5VZR2 741 aa15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 ADALQ6DHV7 355 aa15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 NAA16Q6N069 864 aaPredicted RBP15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 NSUN7Q8NE18 718 aaKnown RBP15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 ATRIPQ8WXE1 791 aa15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 ZNF622Q969S3 477 aaKnown RBP eCLIP15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 FAM212AQ96EL1 285 aa15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 ZNF396Q96N95 335 aaPredicted RBP15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 RHOXF2Q9BQY4 288 aa15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 MRPL44Q9H9J2 332 aaKnown RBP15.31■□□□□ 0.04
TUBGCP4-201ENST00000260383 LRRIQ3A6PVS8 624 aaPredicted RBP15.3■□□□□ 0.04
TUBGCP4-201ENST00000260383 ADKP55263 362 aaKnown RBP15.3■□□□□ 0.04
TUBGCP4-201ENST00000260383 HSP90AA4PQ58FG1 418 aa15.3■□□□□ 0.04
TUBGCP4-201ENST00000260383 ANKRD20A12PQ8NF67 263 aa15.3■□□□□ 0.04
TUBGCP4-201ENST00000260383 INTS13Q9NVM9 706 aa15.3■□□□□ 0.04
TUBGCP4-201ENST00000260383 AACSQ86V21 672 aa15.3■□□□□ 0.04
TUBGCP4-201ENST00000260383 PDILTQ8N807 584 aa15.3■□□□□ 0.04
TUBGCP4-201ENST00000260383 FAM71BQ8TC56 605 aa15.3■□□□□ 0.04
TUBGCP4-201ENST00000260383 NEK1Q96PY6 1258 aa15.3■□□□□ 0.04
TUBGCP4-201ENST00000260383 EXOC5O00471 708 aa15.3■□□□□ 0.04
TUBGCP4-201ENST00000260383 MNAT1P51948 309 aa15.3■□□□□ 0.04
TUBGCP4-201ENST00000260383 MTF1Q14872 753 aa15.3■□□□□ 0.04
TUBGCP4-201ENST00000260383 HSP90B2PQ58FF3 399 aa15.3■□□□□ 0.04
TUBGCP4-201ENST00000260383 FBXW10Q5XX13 1052 aa15.3■□□□□ 0.04
TUBGCP4-201ENST00000260383 KCNV1Q6PIU1 500 aa15.3■□□□□ 0.04
TUBGCP4-201ENST00000260383 CLIC4Q9Y696 253 aa15.3■□□□□ 0.04
TUBGCP4-201ENST00000260383 PTPDC1A2A3K4 754 aa15.29■□□□□ 0.04
TUBGCP4-201ENST00000260383 IKBKBO14920 756 aa15.29■□□□□ 0.04
TUBGCP4-201ENST00000260383 HNRNPH1P31943 449 aaKnown RBP15.29■□□□□ 0.04
TUBGCP4-201ENST00000260383 CCT2P78371 535 aaKnown RBP15.29■□□□□ 0.04
TUBGCP4-201ENST00000260383 MSANTD4Q8NCY6 345 aa15.29■□□□□ 0.04
TUBGCP4-201ENST00000260383 ZNF202O95125 648 aa15.29■□□□□ 0.04
TUBGCP4-201ENST00000260383 ATP6V1AP38606 617 aa15.29■□□□□ 0.04
TUBGCP4-201ENST00000260383 HSP90AB4PQ58FF6 505 aa15.29■□□□□ 0.04
TUBGCP4-201ENST00000260383 DHX37Q8IY37 1157 aaKnown RBP15.29■□□□□ 0.04
TUBGCP4-201ENST00000260383 FSD1Q9BTV5 496 aa15.29■□□□□ 0.04
TUBGCP4-201ENST00000260383 CCDC8Q9H0W5 538 aaPredicted RBP15.29■□□□□ 0.04
TUBGCP4-201ENST00000260383 BOLA2Q9H3K6 86 aa15.29■□□□□ 0.04
TUBGCP4-201ENST00000260383 NCOA5Q9HCD5 579 aaKnown RBP15.29■□□□□ 0.04
TUBGCP4-201ENST00000260383 SNRKQ9NRH2 765 aa15.29■□□□□ 0.04
TUBGCP4-201ENST00000260383 FANCLQ9NW38 375 aa15.29■□□□□ 0.04
TUBGCP4-201ENST00000260383 MAP3K19Q56UN5 1328 aa15.28■□□□□ 0.04
TUBGCP4-201ENST00000260383 MYH15Q9Y2K3 1946 aa15.28■□□□□ 0.04
TUBGCP4-201ENST00000260383 ERLIN2O94905 339 aa15.28■□□□□ 0.04
TUBGCP4-201ENST00000260383 MSL3Q8N5Y2 521 aaKnown RBP15.28■□□□□ 0.04
TUBGCP4-201ENST00000260383 TC2NQ8N9U0 490 aa15.28■□□□□ 0.04
TUBGCP4-201ENST00000260383 LZTFL1Q9NQ48 299 aa15.28■□□□□ 0.04
TUBGCP4-201ENST00000260383 TLR7Q9NYK1 1049 aaKnown RBP15.28■□□□□ 0.04
TUBGCP4-201ENST00000260383 GOLGA6L9A6NEM1 432 aa15.28■□□□□ 0.04
TUBGCP4-201ENST00000260383 ERLIN1O75477 346 aa15.28■□□□□ 0.04
TUBGCP4-201ENST00000260383 TAF5LO75529 589 aa15.28■□□□□ 0.04
TUBGCP4-201ENST00000260383 CHGBP05060 677 aa15.28■□□□□ 0.04
TUBGCP4-201ENST00000260383 TAF7Q15545 349 aaPredicted RBP15.28■□□□□ 0.04
TUBGCP4-201ENST00000260383 LINC00301Q8NCQ3 95 aa15.28■□□□□ 0.04
TUBGCP4-201ENST00000260383 EDC3Q96F86 508 aaKnown RBP15.28■□□□□ 0.04
TUBGCP4-201ENST00000260383 MED23Q9ULK4 1368 aa15.27■□□□□ 0.04
TUBGCP4-201ENST00000260383 A0A1W2PQ27 194 aa15.27■□□□□ 0.04
TUBGCP4-201ENST00000260383 A0A1W2PQ64 194 aa15.27■□□□□ 0.04
TUBGCP4-201ENST00000260383 A0A1W2PQD8 194 aa15.27■□□□□ 0.04
TUBGCP4-201ENST00000260383 CBFA2T2O43439 604 aa15.27■□□□□ 0.04
TUBGCP4-201ENST00000260383 RNF40O75150 1001 aa15.27■□□□□ 0.04
TUBGCP4-201ENST00000260383 OTUD7BQ6GQQ9 843 aa15.27■□□□□ 0.04
TUBGCP4-201ENST00000260383 GPATCH3Q96I76 525 aa15.27■□□□□ 0.04
TUBGCP4-201ENST00000260383 FAM208AQ9UK61 1670 aaKnown RBP15.27■□□□□ 0.03
TUBGCP4-201ENST00000260383 COL15A1P39059 1388 aa15.27■□□□□ 0.03
TUBGCP4-201ENST00000260383 TBX2Q13207 712 aaPredicted RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms