RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 KIF2CQ99661 725 aa21.14■□□□□ 0.97
SRSF1-201ENST00000258962 HAUS7Q99871 368 aa21.14■□□□□ 0.97
SRSF1-201ENST00000258962 DUOX1Q9NRD9 1551 aa21.13■□□□□ 0.97
SRSF1-201ENST00000258962 IQCA1LA6NCM1 817 aa21.13■□□□□ 0.97
SRSF1-201ENST00000258962 TNIP1Q15025 636 aa21.13■□□□□ 0.97
SRSF1-201ENST00000258962 ATP2B3Q16720 1220 aa21.13■□□□□ 0.97
SRSF1-201ENST00000258962 DOK7Q18PE1 504 aa21.13■□□□□ 0.97
SRSF1-201ENST00000258962 EDC3Q96F86 508 aaKnown RBP21.13■□□□□ 0.97
SRSF1-201ENST00000258962 DBNDD1Q9H9R9 158 aa21.13■□□□□ 0.97
SRSF1-201ENST00000258962 MROH5Q6ZUA9 1318 aa21.13■□□□□ 0.97
SRSF1-201ENST00000258962 COL4A5P29400 1685 aa21.12■□□□□ 0.97
SRSF1-201ENST00000258962 AKAP11Q9UKA4 1901 aa21.12■□□□□ 0.97
SRSF1-201ENST00000258962 CXCL9Q07325 125 aa21.12■□□□□ 0.97
SRSF1-201ENST00000258962 CIAPIN1Q6FI81 312 aa21.12■□□□□ 0.97
SRSF1-201ENST00000258962 HELBQ8NG08 1087 aaPredicted RBP21.12■□□□□ 0.97
SRSF1-201ENST00000258962 XAGE2Q96GT9 111 aa21.12■□□□□ 0.97
SRSF1-201ENST00000258962 L3MBTL3Q96JM7 780 aaPredicted RBP21.12■□□□□ 0.97
SRSF1-201ENST00000258962 SGSM2O43147 1006 aa21.11■□□□□ 0.97
SRSF1-201ENST00000258962 ECE2O60344 883 aa21.11■□□□□ 0.97
SRSF1-201ENST00000258962 RAD17O75943 681 aa21.11■□□□□ 0.97
SRSF1-201ENST00000258962 TOMM70O94826 608 aa21.11■□□□□ 0.97
SRSF1-201ENST00000258962 PDE8BO95263 885 aa21.11■□□□□ 0.97
SRSF1-201ENST00000258962 NDUFB9Q9Y6M9 179 aa21.11■□□□□ 0.97
SRSF1-201ENST00000258962 ZNF804BA4D1E1 1349 aa21.11■□□□□ 0.97
SRSF1-201ENST00000258962 TAF5LO75529 589 aa21.1■□□□□ 0.97
SRSF1-201ENST00000258962 WTIPA6NIX2 430 aaPredicted RBP21.09■□□□□ 0.97
SRSF1-201ENST00000258962 POTECB2RU33 542 aa21.09■□□□□ 0.97
SRSF1-201ENST00000258962 FGFR2P21802 821 aa21.09■□□□□ 0.97
SRSF1-201ENST00000258962 LMOD1P29536 600 aaPredicted RBP21.09■□□□□ 0.97
SRSF1-201ENST00000258962 C1QTNF8P60827 252 aa21.09■□□□□ 0.97
SRSF1-201ENST00000258962 CWC27Q6UX04 472 aaKnown RBP21.09■□□□□ 0.97
SRSF1-201ENST00000258962 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.09■□□□□ 0.97
SRSF1-201ENST00000258962 DNAJC2Q99543 621 aaKnown RBP21.09■□□□□ 0.97
SRSF1-201ENST00000258962 FSD1Q9BTV5 496 aa21.09■□□□□ 0.97
SRSF1-201ENST00000258962 DIAPH3Q9NSV4 1193 aa21.09■□□□□ 0.97
SRSF1-201ENST00000258962 HACL1Q9UJ83 578 aa21.09■□□□□ 0.97
SRSF1-201ENST00000258962 LTBP1Q14766 1721 aa21.09■□□□□ 0.97
SRSF1-201ENST00000258962 RFX7Q2KHR2 1363 aa21.09■□□□□ 0.97
SRSF1-201ENST00000258962 YDJCA8MPS7 323 aa21.09■□□□□ 0.97
SRSF1-201ENST00000258962 SLC4A3P48751 1232 aa21.09■□□□□ 0.97
SRSF1-201ENST00000258962 MED23Q9ULK4 1368 aa21.08■□□□□ 0.97
SRSF1-201ENST00000258962 PUM3Q15397 648 aaKnown RBP21.08■□□□□ 0.96
SRSF1-201ENST00000258962 ANO2Q9NQ90 1003 aa21.08■□□□□ 0.96
SRSF1-201ENST00000258962 WDR90Q96KV7 1748 aa21.07■□□□□ 0.96
SRSF1-201ENST00000258962 HIP1O00291 1037 aa21.07■□□□□ 0.96
SRSF1-201ENST00000258962 IFIT1P09914 478 aaKnown RBP21.07■□□□□ 0.96
SRSF1-201ENST00000258962 CCDC158Q5M9N0 1113 aa21.07■□□□□ 0.96
SRSF1-201ENST00000258962 PODNQ7Z5L7 613 aa21.07■□□□□ 0.96
SRSF1-201ENST00000258962 DAXXQ9UER7 740 aaPredicted RBP21.07■□□□□ 0.96
SRSF1-201ENST00000258962 MYH7P12883 1935 aa21.06■□□□□ 0.96
SRSF1-201ENST00000258962 NMIQ13287 307 aaPredicted RBP21.06■□□□□ 0.96
SRSF1-201ENST00000258962 TTC39AQ5SRH9 613 aa21.06■□□□□ 0.96
SRSF1-201ENST00000258962 GORABQ5T7V8 394 aa21.06■□□□□ 0.96
SRSF1-201ENST00000258962 RBM46Q8TBY0 533 aaKnown RBP21.06■□□□□ 0.96
SRSF1-201ENST00000258962 FAM227BQ96M60 508 aa21.06■□□□□ 0.96
SRSF1-201ENST00000258962 COA1Q9GZY4 146 aa21.06■□□□□ 0.96
SRSF1-201ENST00000258962 EPB41L2O43491 1005 aaKnown RBP21.05■□□□□ 0.96
SRSF1-201ENST00000258962 SCARF1Q14162 830 aa21.05■□□□□ 0.96
SRSF1-201ENST00000258962 RUFY2Q8WXA3 655 aa21.05■□□□□ 0.96
SRSF1-201ENST00000258962 LPIN2Q92539 896 aa21.05■□□□□ 0.96
SRSF1-201ENST00000258962 TBC1D2Q9BYX2 928 aa21.05■□□□□ 0.96
SRSF1-201ENST00000258962 LSG1Q9H089 658 aaKnown RBP21.05■□□□□ 0.96
SRSF1-201ENST00000258962 TAF1DQ9H5J8 278 aaPredicted RBP21.05■□□□□ 0.96
SRSF1-201ENST00000258962 PAG1Q9NWQ8 432 aa21.05■□□□□ 0.96
SRSF1-201ENST00000258962 A0A0D9SFI3 127 aa21.04■□□□□ 0.96
SRSF1-201ENST00000258962 SNAP23O00161 211 aa21.04■□□□□ 0.96
SRSF1-201ENST00000258962 GOLIM4O00461 696 aa21.04■□□□□ 0.96
SRSF1-201ENST00000258962 PSMD14O00487 310 aa21.04■□□□□ 0.96
SRSF1-201ENST00000258962 EPHX2P34913 555 aa21.04■□□□□ 0.96
SRSF1-201ENST00000258962 GMPSP49915 693 aaPredicted RBP21.04■□□□□ 0.96
SRSF1-201ENST00000258962 KBTBD3Q8NAB2 608 aa21.04■□□□□ 0.96
SRSF1-201ENST00000258962 KCNQ5Q9NR82 932 aa21.04■□□□□ 0.96
SRSF1-201ENST00000258962 SNRKQ9NRH2 765 aa21.04■□□□□ 0.96
SRSF1-201ENST00000258962 RAD50Q92878 1312 aa21.04■□□□□ 0.96
SRSF1-201ENST00000258962 UBE4AQ14139 1066 aa21.04■□□□□ 0.96
SRSF1-201ENST00000258962 PNMA8AQ86V59 439 aaPredicted RBP21.04■□□□□ 0.96
SRSF1-201ENST00000258962 TXNRD3Q86VQ6 643 aa21.04■□□□□ 0.96
SRSF1-201ENST00000258962 ZNF512BQ96KM6 892 aaPredicted RBP21.04■□□□□ 0.96
SRSF1-201ENST00000258962 MYO5AQ9Y4I1 1855 aaKnown RBP21.04■□□□□ 0.96
SRSF1-201ENST00000258962 KLRK1P26718 216 aa21.03■□□□□ 0.96
SRSF1-201ENST00000258962 SCNN1DP51172 638 aa21.03■□□□□ 0.96
SRSF1-201ENST00000258962 BECN1Q14457 450 aa21.03■□□□□ 0.96
SRSF1-201ENST00000258962 EAPPQ56P03 285 aaPredicted RBP21.03■□□□□ 0.96
SRSF1-201ENST00000258962 C15orf52Q6ZUT6 534 aaKnown RBP21.03■□□□□ 0.96
SRSF1-201ENST00000258962 SMC1BQ8NDV3 1235 aa21.03■□□□□ 0.96
SRSF1-201ENST00000258962 GPRC5DQ9NZD1 345 aa21.03■□□□□ 0.96
SRSF1-201ENST00000258962 SLC5A1P13866 664 aa21.02■□□□□ 0.96
SRSF1-201ENST00000258962 EPS15P42566 896 aa21.02■□□□□ 0.96
SRSF1-201ENST00000258962 ZNF804AQ7Z570 1209 aa21.02■□□□□ 0.96
SRSF1-201ENST00000258962 ANTXR1Q9H6X2 564 aa21.02■□□□□ 0.96
SRSF1-201ENST00000258962 SCN4AP35499 1836 aa21.02■□□□□ 0.95
SRSF1-201ENST00000258962 USP17L3A6NCW0 530 aa21.01■□□□□ 0.95
SRSF1-201ENST00000258962 USP17L4A6NCW7 530 aa21.01■□□□□ 0.95
SRSF1-201ENST00000258962 CHGBP05060 677 aa21.01■□□□□ 0.95
SRSF1-201ENST00000258962 VIL1P09327 827 aaKnown RBP21.01■□□□□ 0.95
SRSF1-201ENST00000258962 RPS12P25398 132 aaKnown RBP21.01■□□□□ 0.95
SRSF1-201ENST00000258962 ARID4AP29374 1257 aaPredicted RBP21.01■□□□□ 0.95
SRSF1-201ENST00000258962 PHKA1P46020 1223 aa21.01■□□□□ 0.95
SRSF1-201ENST00000258962 FSTL1Q12841 308 aa21.01■□□□□ 0.95
SRSF1-201ENST00000258962 CCDC102BQ68D86 513 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms