RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 ZHX1Q9UKY1 873 aaPredicted RBP17.25■□□□□ 0.35
TRAFD1-201ENST00000257604 DHX32Q7L7V1 743 aaKnown RBP17.24■□□□□ 0.35
TRAFD1-201ENST00000257604 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.24■□□□□ 0.358e-7■■■■■ 37.5
TRAFD1-201ENST00000257604 CHAF1AQ13111 956 aaPredicted RBP17.24■□□□□ 0.35
TRAFD1-201ENST00000257604 TTC12Q9H892 705 aaPredicted RBP17.24■□□□□ 0.35
TRAFD1-201ENST00000257604 TNS2Q63HR2 1409 aa17.24■□□□□ 0.35
TRAFD1-201ENST00000257604 CCDC152Q4G0S7 254 aa17.24■□□□□ 0.35
TRAFD1-201ENST00000257604 ZNF34Q8IZ26 560 aa17.24■□□□□ 0.35
TRAFD1-201ENST00000257604 USP25Q9UHP3 1055 aa17.24■□□□□ 0.35
TRAFD1-201ENST00000257604 ATP6V1DQ9Y5K8 247 aa17.24■□□□□ 0.35
TRAFD1-201ENST00000257604 PRKAB2O43741 272 aa17.23■□□□□ 0.35
TRAFD1-201ENST00000257604 CAMTA2O94983 1202 aa17.23■□□□□ 0.35
TRAFD1-201ENST00000257604 CKAP2LQ8IYA6 745 aa17.23■□□□□ 0.35
TRAFD1-201ENST00000257604 RAI14Q9P0K7 980 aa17.23■□□□□ 0.35
TRAFD1-201ENST00000257604 ADAMTS7Q9UKP4 1686 aa17.23■□□□□ 0.35
TRAFD1-201ENST00000257604 ZNF500O60304 480 aaPredicted RBP17.23■□□□□ 0.35
TRAFD1-201ENST00000257604 MBD3O95983 291 aa17.23■□□□□ 0.35
TRAFD1-201ENST00000257604 SLC5A1P13866 664 aa17.23■□□□□ 0.35
TRAFD1-201ENST00000257604 RASGRF1Q13972 1273 aa17.23■□□□□ 0.35
TRAFD1-201ENST00000257604 BICD2Q8TD16 824 aa17.23■□□□□ 0.35
TRAFD1-201ENST00000257604 TFCP2L1Q9NZI6 479 aa17.23■□□□□ 0.35
TRAFD1-201ENST00000257604 TCHHQ07283 1943 aa17.23■□□□□ 0.35
TRAFD1-201ENST00000257604 CPLX1O14810 134 aa17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 CTDSPL2Q05D32 466 aa17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 PDE4CQ08493 712 aa17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 TRDNQ13061 729 aa17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 PUM3Q15397 648 aaKnown RBP17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 NFXL1Q6ZNB6 911 aa17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 GPR108Q9NPR9 543 aa17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 KLF18A0A0U1RQI7 1052 aa17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 MINDY4BA8MYZ0 360 aa17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 EPB41L2O43491 1005 aaKnown RBP17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 PRC1O43663 620 aa17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 B4E1Z4 1266 aa17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 ZPR1O75312 459 aa17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 MBD4O95243 580 aa17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 POLR3DP05423 398 aaPredicted RBP17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 CHRNDQ07001 517 aa17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 NBPF5PQ86XG9 351 aaPredicted RBP17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 APPBP2Q92624 585 aa17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 CCNL1Q9UK58 526 aaPredicted RBP17.22■□□□□ 0.35
TRAFD1-201ENST00000257604 PTPDC1A2A3K4 754 aa17.21■□□□□ 0.35
TRAFD1-201ENST00000257604 GOLGA8BA8MQT2 603 aa17.21■□□□□ 0.35
TRAFD1-201ENST00000257604 LRRFIP1Q32MZ4 808 aaKnown RBP17.21■□□□□ 0.35
TRAFD1-201ENST00000257604 TBC1D9BQ66K14 1250 aa17.21■□□□□ 0.35
TRAFD1-201ENST00000257604 MICU3Q86XE3 530 aa17.21■□□□□ 0.35
TRAFD1-201ENST00000257604 SPATA5Q8NB90 893 aa17.21■□□□□ 0.35
TRAFD1-201ENST00000257604 SPATA32Q96LK8 384 aa17.21■□□□□ 0.35
TRAFD1-201ENST00000257604 PDE6AP16499 860 aa17.21■□□□□ 0.35
TRAFD1-201ENST00000257604 GTF3C6Q969F1 213 aa17.21■□□□□ 0.35
TRAFD1-201ENST00000257604 ERVV-1B6SEH8 477 aa17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 UTRNP46939 3433 aa17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 KRT85P78386 507 aa17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 NKX2-3Q8TAU0 364 aa17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 LPIN2Q92539 896 aa17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 SYAP1Q96A49 352 aaPredicted RBP17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 CDCA7Q9BWT1 371 aaPredicted RBP17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 TDO2P48775 406 aa17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 HS1BP3Q53T59 392 aa17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 CCDC39Q9UFE4 941 aa17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 ZNF652Q9Y2D9 606 aa17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 TOGARAM1Q9Y4F4 1720 aa17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 IGSF3O75054 1194 aa17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 TTC6Q86TZ1 520 aa17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 AMIGO3Q86WK7 504 aa17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 CELF1Q92879 486 aaKnown RBP17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 TSPY26PQ9H489 355 aa17.2■□□□□ 0.34
TRAFD1-201ENST00000257604 PDCP20941 246 aa17.19■□□□□ 0.34
TRAFD1-201ENST00000257604 DSCC1Q9BVC3 393 aa17.19■□□□□ 0.34
TRAFD1-201ENST00000257604 MTMR7Q9Y216 660 aa17.19■□□□□ 0.34
TRAFD1-201ENST00000257604 N4BP2Q86UW6 1770 aaPredicted RBP17.19■□□□□ 0.34
TRAFD1-201ENST00000257604 SMIM22K7EJ46 135 aa17.19■□□□□ 0.34
TRAFD1-201ENST00000257604 ANKRD18AQ8IVF6 992 aa17.19■□□□□ 0.34
TRAFD1-201ENST00000257604 CMTR1Q8N1G2 835 aaKnown RBP17.19■□□□□ 0.34
TRAFD1-201ENST00000257604 SPC24Q8NBT2 197 aa17.19■□□□□ 0.34
TRAFD1-201ENST00000257604 SDR42E1Q8WUS8 393 aa17.19■□□□□ 0.34
TRAFD1-201ENST00000257604 SETDB2Q96T68 719 aa17.19■□□□□ 0.34
TRAFD1-201ENST00000257604 NAPBQ9H115 298 aa17.19■□□□□ 0.34
TRAFD1-201ENST00000257604 ERCC4Q92889 916 aaPredicted RBP17.18■□□□□ 0.34
TRAFD1-201ENST00000257604 KCNB2Q92953 911 aa17.18■□□□□ 0.34
TRAFD1-201ENST00000257604 GPR101Q96P66 508 aaPredicted RBP17.18■□□□□ 0.34
TRAFD1-201ENST00000257604 PLA2G12BQ9BX93 195 aa17.18■□□□□ 0.34
TRAFD1-201ENST00000257604 SENP2Q9HC62 589 aa17.18■□□□□ 0.34
TRAFD1-201ENST00000257604 CTNNA3Q9UI47 895 aa17.18■□□□□ 0.34
TRAFD1-201ENST00000257604 CDHR2Q9BYE9 1310 aa17.18■□□□□ 0.34
TRAFD1-201ENST00000257604 A0A087WWV3 80 aa17.18■□□□□ 0.34
TRAFD1-201ENST00000257604 MAP3K12Q12852 859 aa17.18■□□□□ 0.34
TRAFD1-201ENST00000257604 DISP2A7MBM2 1401 aa17.17■□□□□ 0.34
TRAFD1-201ENST00000257604 LIG1P18858 919 aa17.17■□□□□ 0.34
TRAFD1-201ENST00000257604 KLRK1P26718 216 aa17.17■□□□□ 0.34
TRAFD1-201ENST00000257604 PIBF1Q8WXW3 757 aa17.17■□□□□ 0.34
TRAFD1-201ENST00000257604 SMARCC1Q92922 1105 aaPredicted RBP17.17■□□□□ 0.34
TRAFD1-201ENST00000257604 TUBGCP6Q96RT7 1819 aa17.17■□□□□ 0.34
TRAFD1-201ENST00000257604 PRDM1O75626 825 aa17.17■□□□□ 0.34
TRAFD1-201ENST00000257604 ADD2P35612 726 aa17.17■□□□□ 0.34
TRAFD1-201ENST00000257604 AIFM3Q96NN9 605 aa17.17■□□□□ 0.34
TRAFD1-201ENST00000257604 THRAP3Q9Y2W1 955 aaKnown RBP17.17■□□□□ 0.34
TRAFD1-201ENST00000257604 GLI3P10071 1580 aa17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 NTSR2O95665 410 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms