RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 SWAP70Q9UH65 585 aa15.46■□□□□ 0.07
PRPF38A-201ENST00000257181 ZBTB43O43298 467 aa15.46■□□□□ 0.07
PRPF38A-201ENST00000257181 RTN1Q16799 776 aa15.46■□□□□ 0.07
PRPF38A-201ENST00000257181 C2orf69Q8N8R5 385 aa15.46■□□□□ 0.07
PRPF38A-201ENST00000257181 VAMP4O75379 141 aa15.46■□□□□ 0.06
PRPF38A-201ENST00000257181 HOXD10P28358 340 aa15.46■□□□□ 0.06
PRPF38A-201ENST00000257181 ZNF408Q9H9D4 720 aa15.46■□□□□ 0.06
PRPF38A-201ENST00000257181 LIMCH1Q9UPQ0 1083 aa15.46■□□□□ 0.06
PRPF38A-201ENST00000257181 SAMM50Q9Y512 469 aa15.46■□□□□ 0.06
PRPF38A-201ENST00000257181 EPB41L2O43491 1005 aaKnown RBP15.45■□□□□ 0.06
PRPF38A-201ENST00000257181 SMCR8Q8TEV9 937 aaPredicted RBP15.45■□□□□ 0.06
PRPF38A-201ENST00000257181 TANGO6Q9C0B7 1094 aa15.45■□□□□ 0.06
PRPF38A-201ENST00000257181 FKBP15Q5T1M5 1219 aa15.45■□□□□ 0.06
PRPF38A-201ENST00000257181 CPSF1Q10570 1443 aaKnown RBP15.45■□□□□ 0.06
PRPF38A-201ENST00000257181 CDAN1Q8IWY9 1227 aa15.45■□□□□ 0.06
PRPF38A-201ENST00000257181 CARMIL3Q8ND23 1372 aa15.45■□□□□ 0.06
PRPF38A-201ENST00000257181 ERLIN2O94905 339 aa15.45■□□□□ 0.06
PRPF38A-201ENST00000257181 CKAP2LQ8IYA6 745 aa15.45■□□□□ 0.06
PRPF38A-201ENST00000257181 ZNF496Q96IT1 587 aaPredicted RBP15.45■□□□□ 0.06
PRPF38A-201ENST00000257181 USPL1Q5W0Q7 1092 aa15.45■□□□□ 0.06
PRPF38A-201ENST00000257181 CIAPIN1Q6FI81 312 aa15.45■□□□□ 0.06
PRPF38A-201ENST00000257181 GIGYF2Q6Y7W6 1299 aaKnown RBP15.45■□□□□ 0.06
PRPF38A-201ENST00000257181 PPFIBP1Q86W92 1011 aa15.45■□□□□ 0.06
PRPF38A-201ENST00000257181 SPATA32Q96LK8 384 aa15.45■□□□□ 0.06
PRPF38A-201ENST00000257181 CIAO1O76071 339 aa15.44■□□□□ 0.06
PRPF38A-201ENST00000257181 CCDC17Q96LX7 622 aa15.44■□□□□ 0.06
PRPF38A-201ENST00000257181 MAP3K9P80192 1104 aa15.44■□□□□ 0.06
PRPF38A-201ENST00000257181 ELMSAN1Q6PJG2 1045 aa15.44■□□□□ 0.06
PRPF38A-201ENST00000257181 MAGEB6Q8N7X4 407 aa15.44■□□□□ 0.06
PRPF38A-201ENST00000257181 TMEM87BQ96K49 555 aa15.44■□□□□ 0.06
PRPF38A-201ENST00000257181 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.44■□□□□ 0.06
PRPF38A-201ENST00000257181 COPB2P35606 906 aa15.44■□□□□ 0.06
PRPF38A-201ENST00000257181 PPP1R2P41236 205 aa15.44■□□□□ 0.06
PRPF38A-201ENST00000257181 GPR108Q9NPR9 543 aa15.44■□□□□ 0.06
PRPF38A-201ENST00000257181 HEG1Q9ULI3 1381 aa15.44■□□□□ 0.06
PRPF38A-201ENST00000257181 MCF2L2Q86YR7 1114 aa15.44■□□□□ 0.06
PRPF38A-201ENST00000257181 C8orf58Q8NAV2 365 aa15.44■□□□□ 0.06
PRPF38A-201ENST00000257181 ZSCAN16Q9H4T2 348 aaPredicted RBP15.43■□□□□ 0.06
PRPF38A-201ENST00000257181 FER1L4A9Z1Z3 1794 aa15.43■□□□□ 0.06
PRPF38A-201ENST00000257181 ANKRD62A6NC57 917 aa15.43■□□□□ 0.06
PRPF38A-201ENST00000257181 NLRX1Q86UT6 975 aa15.43■□□□□ 0.06
PRPF38A-201ENST00000257181 CDC42BPBQ9Y5S2 1711 aa15.43■□□□□ 0.06
PRPF38A-201ENST00000257181 GIGYF1O75420 1035 aaPredicted RBP15.43■□□□□ 0.06
PRPF38A-201ENST00000257181 CCDC192P0DO97 292 aa15.43■□□□□ 0.06
PRPF38A-201ENST00000257181 NARFQ9UHQ1 456 aa15.43■□□□□ 0.06
PRPF38A-201ENST00000257181 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.43■□□□□ 0.06
PRPF38A-201ENST00000257181 STK3Q13188 491 aa15.43■□□□□ 0.06
PRPF38A-201ENST00000257181 CCDC174Q6PII3 467 aa15.43■□□□□ 0.06
PRPF38A-201ENST00000257181 ABCA6Q8N139 1617 aa15.42■□□□□ 0.06
PRPF38A-201ENST00000257181 TTC22Q5TAA0 569 aa15.42■□□□□ 0.06
PRPF38A-201ENST00000257181 CDC37L1Q7L3B6 337 aa15.42■□□□□ 0.06
PRPF38A-201ENST00000257181 APOBEC3FQ8IUX4 373 aaKnown RBP15.42■□□□□ 0.06
PRPF38A-201ENST00000257181 PODXL2Q9NZ53 605 aa15.42■□□□□ 0.06
PRPF38A-201ENST00000257181 CCDC171Q6TFL3 1326 aa15.42■□□□□ 0.06
PRPF38A-201ENST00000257181 RBM25P49756 843 aaKnown RBP15.42■□□□□ 0.06
PRPF38A-201ENST00000257181 NAPAP54920 295 aa15.42■□□□□ 0.06
PRPF38A-201ENST00000257181 PRKAG2Q9UGJ0 569 aa15.42■□□□□ 0.06
PRPF38A-201ENST00000257181 USP16Q9Y5T5 823 aa15.42■□□□□ 0.06
PRPF38A-201ENST00000257181 EXOC8Q8IYI6 725 aa15.42■□□□□ 0.06
PRPF38A-201ENST00000257181 COA1Q9GZY4 146 aa15.42■□□□□ 0.06
PRPF38A-201ENST00000257181 RABGAP1Q9Y3P9 1069 aa15.42■□□□□ 0.06
PRPF38A-201ENST00000257181 FAM89AQ96GI7 184 aa15.41■□□□□ 0.06
PRPF38A-201ENST00000257181 DHX36Q9H2U1 1008 aaKnown RBP15.41■□□□□ 0.06
PRPF38A-201ENST00000257181 A1BGP04217 495 aa15.41■□□□□ 0.06
PRPF38A-201ENST00000257181 ODR4Q5SWX8 454 aa15.41■□□□□ 0.06
PRPF38A-201ENST00000257181 DDX11Q96FC9 970 aa15.41■□□□□ 0.06
PRPF38A-201ENST00000257181 BICC1Q9H694 974 aaKnown RBP15.41■□□□□ 0.06
PRPF38A-201ENST00000257181 SNRKQ9NRH2 765 aa15.41■□□□□ 0.06
PRPF38A-201ENST00000257181 SPATA31D1Q6ZQQ2 1576 aa15.41■□□□□ 0.06
PRPF38A-201ENST00000257181 MSANTD4Q8NCY6 345 aa15.41■□□□□ 0.06
PRPF38A-201ENST00000257181 MED14O60244 1454 aa15.41■□□□□ 0.06
PRPF38A-201ENST00000257181 GNPTABQ3T906 1256 aa15.41■□□□□ 0.06
PRPF38A-201ENST00000257181 JAKMIP3Q5VZ66 844 aa15.41■□□□□ 0.06
PRPF38A-201ENST00000257181 APPBP2Q92624 585 aa15.41■□□□□ 0.06
PRPF38A-201ENST00000257181 HCLS1P14317 486 aaPredicted RBP15.4■□□□□ 0.06
PRPF38A-201ENST00000257181 GRAPQ13588 217 aa15.4■□□□□ 0.06
PRPF38A-201ENST00000257181 IQCEQ6IPM2 695 aa15.4■□□□□ 0.06
PRPF38A-201ENST00000257181 GRAPLQ8TC17 118 aaPredicted RBP15.4■□□□□ 0.06
PRPF38A-201ENST00000257181 CHMP4BP1P59074 171 aa15.4■□□□□ 0.06
PRPF38A-201ENST00000257181 ERCC4Q92889 916 aaPredicted RBP15.4■□□□□ 0.06
PRPF38A-201ENST00000257181 DEF6Q9H4E7 631 aa15.4■□□□□ 0.06
PRPF38A-201ENST00000257181 RBM19Q9Y4C8 960 aaKnown RBP15.4■□□□□ 0.06
PRPF38A-201ENST00000257181 CLTCL1P53675 1640 aa15.4■□□□□ 0.06
PRPF38A-201ENST00000257181 UBA7P41226 1012 aa15.4■□□□□ 0.06
PRPF38A-201ENST00000257181 TFCP2Q12800 502 aa15.39■□□□□ 0.05
PRPF38A-201ENST00000257181 NRXN1Q9ULB1 1477 aa15.39■□□□□ 0.05
PRPF38A-201ENST00000257181 MSL1Q68DK7 614 aa15.39■□□□□ 0.05
PRPF38A-201ENST00000257181 CCDC117Q8IWD4 279 aaPredicted RBP15.39■□□□□ 0.05
PRPF38A-201ENST00000257181 DNM2P50570 870 aa15.39■□□□□ 0.05
PRPF38A-201ENST00000257181 TNNI3KQ59H18 835 aa15.39■□□□□ 0.05
PRPF38A-201ENST00000257181 SPATA5Q8NB90 893 aa15.39■□□□□ 0.05
PRPF38A-201ENST00000257181 GTF3C2Q8WUA4 911 aaPredicted RBP15.39■□□□□ 0.05
PRPF38A-201ENST00000257181 FPGT-TNNI3KV9GXZ4 949 aa15.39■□□□□ 0.05
PRPF38A-201ENST00000257181 ANXA1P04083 346 aa15.39■□□□□ 0.05
PRPF38A-201ENST00000257181 TTF2Q9UNY4 1162 aaKnown RBP15.39■□□□□ 0.05
PRPF38A-201ENST00000257181 SNX16P57768 344 aa15.38■□□□□ 0.05
PRPF38A-201ENST00000257181 IMPG2Q9BZV3 1241 aa15.38■□□□□ 0.05
PRPF38A-201ENST00000257181 A0A1B0GUL7 405 aa15.38■□□□□ 0.05
PRPF38A-201ENST00000257181 TNMDQ9H2S6 317 aa15.38■□□□□ 0.05
PRPF38A-201ENST00000257181 ZNF804BA4D1E1 1349 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms