RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 SMC1AQ14683 1233 aaKnown RBP19.29■□□□□ 0.68
SORT1-201ENST00000256637 DCAF17Q5H9S7 520 aaPredicted RBP19.29■□□□□ 0.68
SORT1-201ENST00000256637 ZNF790Q6PG37 636 aa19.29■□□□□ 0.68
SORT1-201ENST00000256637 CCDC102AQ96A19 550 aa19.29■□□□□ 0.68
SORT1-201ENST00000256637 SUPT20HQ8NEM7 779 aa19.29■□□□□ 0.68
SORT1-201ENST00000256637 DENND2AQ9ULE3 1009 aa19.29■□□□□ 0.68
SORT1-201ENST00000256637 CCDC50Q8IVM0 306 aa19.29■□□□□ 0.68
SORT1-201ENST00000256637 LETM2Q2VYF4 491 aa19.28■□□□□ 0.68
SORT1-201ENST00000256637 PTGS1P23219 599 aa19.28■□□□□ 0.68
SORT1-201ENST00000256637 POLKQ9UBT6 870 aa19.28■□□□□ 0.68
SORT1-201ENST00000256637 RAD51AP2Q09MP3 1159 aa19.28■□□□□ 0.68
SORT1-201ENST00000256637 UTP14CQ5TAP6 766 aaKnown RBP19.28■□□□□ 0.68
SORT1-201ENST00000256637 IMPG2Q9BZV3 1241 aa19.28■□□□□ 0.68
SORT1-201ENST00000256637 PRKAG2Q9UGJ0 569 aa19.28■□□□□ 0.68
SORT1-201ENST00000256637 LIMCH1Q9UPQ0 1083 aa19.28■□□□□ 0.68
SORT1-201ENST00000256637 GOLGA6L10A0A0M3HER8 536 aa19.27■□□□□ 0.68
SORT1-201ENST00000256637 hCG_1642624A0A1W2PR95 340 aa19.27■□□□□ 0.68
SORT1-201ENST00000256637 SESTD1Q86VW0 696 aa19.27■□□□□ 0.68
SORT1-201ENST00000256637 KRT2P35908 639 aa19.27■□□□□ 0.68
SORT1-201ENST00000256637 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.27■□□□□ 0.68
SORT1-201ENST00000256637 RBM8AQ9Y5S9 174 aaKnown RBP19.27■□□□□ 0.68
SORT1-201ENST00000256637 NOP9Q86U38 636 aaKnown RBP19.27■□□□□ 0.68
SORT1-201ENST00000256637 CFBP00751 764 aa19.27■□□□□ 0.68
SORT1-201ENST00000256637 IFFO1Q0D2I5 559 aa19.27■□□□□ 0.68
SORT1-201ENST00000256637 TBC1D9Q6ZT07 1266 aa19.27■□□□□ 0.67
SORT1-201ENST00000256637 GPATCH8Q9UKJ3 1502 aaKnown RBP19.27■□□□□ 0.67
SORT1-201ENST00000256637 CEP135Q66GS9 1140 aa19.27■□□□□ 0.67
SORT1-201ENST00000256637 FAM47AQ5JRC9 791 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 DBNDD1Q9H9R9 158 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 GABPAQ06546 454 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 NCAPH2Q6IBW4 605 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 TNNQ9UQP3 1299 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 CEP83Q9Y592 693 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 ANKRD36BQ8N2N9 1353 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 PDE8AO60658 829 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 RAD17O75943 681 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 KRT19P08727 400 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 USPL1Q5W0Q7 1092 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 CCDC91Q7Z6B0 441 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 MAP3K19Q56UN5 1328 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 B4E1Z4 1266 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 CNNM2Q9H8M5 875 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 GTF3C6Q969F1 213 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 TBC1D7Q9P0N9 293 aa19.26■□□□□ 0.67
SORT1-201ENST00000256637 CAPN15O75808 1086 aa19.25■□□□□ 0.67
SORT1-201ENST00000256637 FLT4P35916 1363 aa19.25■□□□□ 0.67
SORT1-201ENST00000256637 PHACTR3Q96KR7 559 aa19.25■□□□□ 0.67
SORT1-201ENST00000256637 ZNF335Q9H4Z2 1342 aaPredicted RBP19.25■□□□□ 0.67
SORT1-201ENST00000256637 ZNF174Q15697 407 aa19.25■□□□□ 0.67
SORT1-201ENST00000256637 TMC6Q7Z403 805 aa19.25■□□□□ 0.67
SORT1-201ENST00000256637 PPP1R16BQ96T49 567 aa19.25■□□□□ 0.67
SORT1-201ENST00000256637 RBM27Q9P2N5 1060 aaKnown RBP19.24■□□□□ 0.67
SORT1-201ENST00000256637 GSTA5Q7RTV2 222 aa19.24■□□□□ 0.67
SORT1-201ENST00000256637 SH3BP5O60239 455 aa19.24■□□□□ 0.67
SORT1-201ENST00000256637 RNF113AO15541 343 aaKnown RBP19.24■□□□□ 0.67
SORT1-201ENST00000256637 NBPF3Q9H094 633 aa19.24■□□□□ 0.67
SORT1-201ENST00000256637 A0A1B0GUL7 405 aa19.24■□□□□ 0.67
SORT1-201ENST00000256637 MAP2K1Q02750 393 aaPredicted RBP19.24■□□□□ 0.67
SORT1-201ENST00000256637 BIRC3Q13489 604 aa19.24■□□□□ 0.67
SORT1-201ENST00000256637 RASA3Q14644 834 aa19.24■□□□□ 0.67
SORT1-201ENST00000256637 TTC6Q86TZ1 520 aa19.24■□□□□ 0.67
SORT1-201ENST00000256637 PAIP2Q9BPZ3 127 aaKnown RBP19.23■□□□□ 0.67
SORT1-201ENST00000256637 SH2D4AQ9H788 454 aa19.23■□□□□ 0.67
SORT1-201ENST00000256637 TESPA1A2RU30 521 aaPredicted RBP19.23■□□□□ 0.67
SORT1-201ENST00000256637 SLC52A2Q9HAB3 445 aa19.23■□□□□ 0.67
SORT1-201ENST00000256637 SPC25Q9HBM1 224 aa19.23■□□□□ 0.67
SORT1-201ENST00000256637 TRPM2O94759 1503 aa19.23■□□□□ 0.67
SORT1-201ENST00000256637 SSFA2P28290 1259 aa19.23■□□□□ 0.67
SORT1-201ENST00000256637 ARHGEF16Q5VV41 709 aa19.23■□□□□ 0.67
SORT1-201ENST00000256637 FAM196AQ6ZSG2 479 aa19.23■□□□□ 0.67
SORT1-201ENST00000256637 HLTFQ14527 1009 aaKnown RBP eCLIP19.23■□□□□ 0.67
SORT1-201ENST00000256637 PUM3Q15397 648 aaKnown RBP19.23■□□□□ 0.67
SORT1-201ENST00000256637 G2E3Q7L622 706 aa19.23■□□□□ 0.67
SORT1-201ENST00000256637 XAGE2Q96GT9 111 aa19.23■□□□□ 0.67
SORT1-201ENST00000256637 FERMT1Q9BQL6 677 aa19.23■□□□□ 0.67
SORT1-201ENST00000256637 TSNARE1Q96NA8 513 aa19.23■□□□□ 0.67
SORT1-201ENST00000256637 GPR101Q96P66 508 aaPredicted RBP19.23■□□□□ 0.67
SORT1-201ENST00000256637 NBPF7P0C2Y1 421 aaPredicted RBP19.22■□□□□ 0.67
SORT1-201ENST00000256637 APOL6Q9BWW8 343 aa19.22■□□□□ 0.67
SORT1-201ENST00000256637 PPP2R5CQ13362 524 aa19.22■□□□□ 0.67
SORT1-201ENST00000256637 PPP2R5DQ14738 602 aa19.22■□□□□ 0.67
SORT1-201ENST00000256637 SKIV2LQ15477 1246 aaKnown RBP19.22■□□□□ 0.67
SORT1-201ENST00000256637 PPEF1O14829 653 aaPredicted RBP19.22■□□□□ 0.67
SORT1-201ENST00000256637 ANO10Q9NW15 660 aa19.22■□□□□ 0.67
SORT1-201ENST00000256637 ABCC11Q96J66 1382 aa19.22■□□□□ 0.67
SORT1-201ENST00000256637 TRPC6Q9Y210 931 aa19.22■□□□□ 0.67
SORT1-201ENST00000256637 AZI2Q9H6S1 392 aa19.21■□□□□ 0.67
SORT1-201ENST00000256637 IQCEQ6IPM2 695 aa19.21■□□□□ 0.67
SORT1-201ENST00000256637 USP48Q86UV5 1035 aa19.21■□□□□ 0.67
SORT1-201ENST00000256637 TTLL3Q9Y4R7 772 aa19.21■□□□□ 0.67
SORT1-201ENST00000256637 KIF4BQ2VIQ3 1234 aa19.21■□□□□ 0.67
SORT1-201ENST00000256637 UQCRHLA0A096LP55 91 aa19.21■□□□□ 0.67
SORT1-201ENST00000256637 HAUS7Q99871 368 aa19.21■□□□□ 0.67
SORT1-201ENST00000256637 YEATS4O95619 227 aa19.21■□□□□ 0.67
SORT1-201ENST00000256637 MYL10Q9BUA6 226 aa19.21■□□□□ 0.67
SORT1-201ENST00000256637 SH3TC1Q8TE82 1336 aa19.2■□□□□ 0.66
SORT1-201ENST00000256637 MFSD14BQ5SR56 506 aa19.2■□□□□ 0.66
SORT1-201ENST00000256637 SH2B1Q9NRF2 756 aaPredicted RBP19.2■□□□□ 0.66
SORT1-201ENST00000256637 EN1Q05925 392 aaPredicted RBP19.2■□□□□ 0.66
SORT1-201ENST00000256637 DPP9Q86TI2 863 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms