RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 AK7Q96M32 723 aa13.5□□□□□ -0.25
VRTN-201ENST00000256362 ZNF609O15014 1411 aa13.5□□□□□ -0.25
VRTN-201ENST00000256362 WASHC4Q2M389 1173 aa13.49□□□□□ -0.25
VRTN-201ENST00000256362 MCMDC2Q4G0Z9 681 aa13.49□□□□□ -0.25
VRTN-201ENST00000256362 KCNB2Q92953 911 aa13.49□□□□□ -0.25
VRTN-201ENST00000256362 ZNF446Q9NWS9 450 aa13.49□□□□□ -0.25
VRTN-201ENST00000256362 CFAP45Q9UL16 551 aa13.49□□□□□ -0.25
VRTN-201ENST00000256362 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.49□□□□□ -0.25
VRTN-201ENST00000256362 SLIT1O75093 1534 aa13.49□□□□□ -0.25
VRTN-201ENST00000256362 PLA2G4DQ86XP0 818 aa13.49□□□□□ -0.25
VRTN-201ENST00000256362 GOLGA6L1Q8N7Z2 621 aa13.49□□□□□ -0.25
VRTN-201ENST00000256362 CWC15Q9P013 229 aaKnown RBP13.49□□□□□ -0.25
VRTN-201ENST00000256362 MED23Q9ULK4 1368 aa13.49□□□□□ -0.25
VRTN-201ENST00000256362 ARHGAP23Q9P227 1491 aa13.49□□□□□ -0.25
VRTN-201ENST00000256362 RXRAP19793 462 aa13.48□□□□□ -0.25
VRTN-201ENST00000256362 PPARDQ03181 441 aa13.48□□□□□ -0.25
VRTN-201ENST00000256362 TDRD7Q8NHU6 1098 aaKnown RBP13.48□□□□□ -0.25
VRTN-201ENST00000256362 ELP1O95163 1332 aa13.48□□□□□ -0.25
VRTN-201ENST00000256362 RGPD2P0DJD1 1756 aa13.48□□□□□ -0.25
VRTN-201ENST00000256362 HMG20BQ9P0W2 317 aa13.48□□□□□ -0.25
VRTN-201ENST00000256362 ARHGEF25Q86VW2 580 aa13.48□□□□□ -0.25
VRTN-201ENST00000256362 PPP1R13BQ96KQ4 1090 aa13.48□□□□□ -0.25
VRTN-201ENST00000256362 METTL22Q9BUU2 404 aaPredicted RBP13.48□□□□□ -0.25
VRTN-201ENST00000256362 CTDNEP1O95476 244 aa13.47□□□□□ -0.25
VRTN-201ENST00000256362 MARCKSP29966 332 aaPredicted RBP13.47□□□□□ -0.25
VRTN-201ENST00000256362 KRT32Q14532 448 aa13.47□□□□□ -0.25
VRTN-201ENST00000256362 SMC1AQ14683 1233 aaKnown RBP13.47□□□□□ -0.25
VRTN-201ENST00000256362 LRRC24Q50LG9 513 aa13.47□□□□□ -0.25
VRTN-201ENST00000256362 NSUN7Q8NE18 718 aaKnown RBP13.47□□□□□ -0.25
VRTN-201ENST00000256362 FEZ2Q9UHY8 353 aaPredicted RBP13.47□□□□□ -0.25
VRTN-201ENST00000256362 CACNA1FO60840 1977 aa13.47□□□□□ -0.25
VRTN-201ENST00000256362 E2F4Q16254 413 aa13.47□□□□□ -0.25
VRTN-201ENST00000256362 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
VRTN-201ENST00000256362 LRRC37A3O60309 1634 aa13.47□□□□□ -0.25
VRTN-201ENST00000256362 APPP05067 770 aa13.47□□□□□ -0.25
VRTN-201ENST00000256362 ATP5JP18859 108 aa13.47□□□□□ -0.25
VRTN-201ENST00000256362 HINFPQ9BQA5 517 aa13.47□□□□□ -0.25
VRTN-201ENST00000256362 WWC2Q6AWC2 1192 aa13.46□□□□□ -0.25
VRTN-201ENST00000256362 PI16Q6UXB8 463 aa13.46□□□□□ -0.25
VRTN-201ENST00000256362 TXLNBQ8N3L3 684 aa13.46□□□□□ -0.25
VRTN-201ENST00000256362 GDAP1L1Q96MZ0 367 aa13.46□□□□□ -0.25
VRTN-201ENST00000256362 DESI2Q9BSY9 194 aa13.46□□□□□ -0.25
VRTN-201ENST00000256362 PUS3Q9BZE2 481 aaKnown RBP13.46□□□□□ -0.25
VRTN-201ENST00000256362 ARFGAP3Q9NP61 516 aa13.46□□□□□ -0.25
VRTN-201ENST00000256362 PAG1Q9NWQ8 432 aa13.46□□□□□ -0.25
VRTN-201ENST00000256362 PES1O00541 588 aaKnown RBP13.46□□□□□ -0.26
VRTN-201ENST00000256362 NEMFO60524 1076 aa13.46□□□□□ -0.26
VRTN-201ENST00000256362 RHOXF2BP0C7M4 288 aa13.46□□□□□ -0.26
VRTN-201ENST00000256362 HSP90B2PQ58FF3 399 aa13.46□□□□□ -0.26
VRTN-201ENST00000256362 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.46□□□□□ -0.26
VRTN-201ENST00000256362 RHOXF2Q9BQY4 288 aa13.46□□□□□ -0.26
VRTN-201ENST00000256362 LZTFL1Q9NQ48 299 aa13.46□□□□□ -0.26
VRTN-201ENST00000256362 LCMT1Q9UIC8 334 aa13.46□□□□□ -0.26
VRTN-201ENST00000256362 CASQ1P31415 396 aa13.45□□□□□ -0.26
VRTN-201ENST00000256362 DPCR1Q3MIW9 517 aa13.45□□□□□ -0.26
VRTN-201ENST00000256362 SYNE3Q6ZMZ3 975 aa13.45□□□□□ -0.26
VRTN-201ENST00000256362 DHX32Q7L7V1 743 aaKnown RBP13.45□□□□□ -0.26
VRTN-201ENST00000256362 CCDC12Q8WUD4 166 aaPredicted RBP13.45□□□□□ -0.26
VRTN-201ENST00000256362 TTLL7Q6ZT98 887 aa13.45□□□□□ -0.26
VRTN-201ENST00000256362 KRT28Q7Z3Y7 464 aa13.45□□□□□ -0.26
VRTN-201ENST00000256362 SLC52A2Q9HAB3 445 aa13.45□□□□□ -0.26
VRTN-201ENST00000256362 FER1L4A9Z1Z3 1794 aa13.45□□□□□ -0.26
VRTN-201ENST00000256362 E7EWF7 191 aa13.45□□□□□ -0.26
VRTN-201ENST00000256362 IFIT1P09914 478 aaKnown RBP13.45□□□□□ -0.26
VRTN-201ENST00000256362 CLIC4Q9Y696 253 aa13.45□□□□□ -0.26
VRTN-201ENST00000256362 CPLX1O14810 134 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 TOP1P11387 765 aaKnown RBP13.44□□□□□ -0.26
VRTN-201ENST00000256362 ATP1A3P13637 1013 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 CYP2C19P33261 490 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 GSDMDP57764 484 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 SART3Q15020 963 aaKnown RBP13.44□□□□□ -0.26
VRTN-201ENST00000256362 IQCB1Q15051 598 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 MYO1CO00159 1063 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 A1BGP04217 495 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 SLC3A2P08195 630 aaKnown RBP13.44□□□□□ -0.26
VRTN-201ENST00000256362 PLA2G4AP47712 749 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 NDUFA8P51970 172 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 UBASH3AP57075 661 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 CCZ1BP86790 482 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 CCZ1P86791 482 aaPredicted RBP13.44□□□□□ -0.26
VRTN-201ENST00000256362 AIFM3Q96NN9 605 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 TATP17735 454 aaPredicted RBP13.44□□□□□ -0.26
VRTN-201ENST00000256362 CABP4P57796 275 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 KBTBD3Q8NAB2 608 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 DENND2AQ9ULE3 1009 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 PCDHA7Q9UN72 937 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 LTN1O94822 1766 aa13.44□□□□□ -0.26
VRTN-201ENST00000256362 KIF2AO00139 706 aaPredicted RBP13.43□□□□□ -0.26
VRTN-201ENST00000256362 HSPD1P10809 573 aaKnown RBP13.43□□□□□ -0.26
VRTN-201ENST00000256362 RFX5P48382 616 aaPredicted RBP13.43□□□□□ -0.26
VRTN-201ENST00000256362 E4F1Q66K89 784 aaPredicted RBP13.43□□□□□ -0.26
VRTN-201ENST00000256362 HAUS7Q99871 368 aa13.43□□□□□ -0.26
VRTN-201ENST00000256362 ZSCAN16Q9H4T2 348 aaPredicted RBP13.43□□□□□ -0.26
VRTN-201ENST00000256362 ADD1P35611 737 aaKnown RBP13.43□□□□□ -0.26
VRTN-201ENST00000256362 COPRSQ9NQ92 184 aa13.43□□□□□ -0.26
VRTN-201ENST00000256362 GOLGA8BA8MQT2 603 aa13.43□□□□□ -0.26
VRTN-201ENST00000256362 M0R2C6 588 aa13.43□□□□□ -0.26
VRTN-201ENST00000256362 PDIA3P30101 505 aaKnown RBP13.43□□□□□ -0.26
VRTN-201ENST00000256362 NOM1Q5C9Z4 860 aaKnown RBP13.43□□□□□ -0.26
VRTN-201ENST00000256362 ANKLE2Q86XL3 938 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms