RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 HSP90AB3PQ58FF7 597 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 Q6ZUG5 572 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 EYA2O00167 538 aa10.87□□□□□ -0.67
RPA1-201ENST00000254719 ZBTB22O15209 634 aa10.87□□□□□ -0.67
RPA1-201ENST00000254719 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
RPA1-201ENST00000254719 SMIM5Q71RC9 77 aa10.87□□□□□ -0.67
RPA1-201ENST00000254719 MB21D2Q8IYB1 491 aaPredicted RBP10.87□□□□□ -0.67
RPA1-201ENST00000254719 ZBTB1Q9Y2K1 713 aa10.87□□□□□ -0.67
RPA1-201ENST00000254719 FOCADQ5VW36 1801 aa10.87□□□□□ -0.67
RPA1-201ENST00000254719 VGLL3A8MV65 326 aa10.87□□□□□ -0.67
RPA1-201ENST00000254719 KIF28PB7ZC32 967 aa10.87□□□□□ -0.67
RPA1-201ENST00000254719 ADGRA1Q86SQ6 560 aa10.87□□□□□ -0.67
RPA1-201ENST00000254719 FERMT3Q86UX7 667 aa10.87□□□□□ -0.67
RPA1-201ENST00000254719 PAG1Q9NWQ8 432 aa10.87□□□□□ -0.67
RPA1-201ENST00000254719 MCMDC2Q4G0Z9 681 aa10.86□□□□□ -0.67
RPA1-201ENST00000254719 CPLX2Q6PUV4 134 aaKnown RBP10.86□□□□□ -0.67
RPA1-201ENST00000254719 CHMP3Q9Y3E7 222 aa10.86□□□□□ -0.67
RPA1-201ENST00000254719 PDIA3P30101 505 aaKnown RBP10.86□□□□□ -0.67
RPA1-201ENST00000254719 UBE2HP62256 183 aa10.86□□□□□ -0.67
RPA1-201ENST00000254719 ITPK1Q13572 414 aa10.86□□□□□ -0.67
RPA1-201ENST00000254719 ZNF34Q8IZ26 560 aa10.86□□□□□ -0.67
RPA1-201ENST00000254719 FAM184AQ8NB25 1140 aa10.86□□□□□ -0.67
RPA1-201ENST00000254719 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.86□□□□□ -0.67
RPA1-201ENST00000254719 GOLIM4O00461 696 aa10.86□□□□□ -0.67
RPA1-201ENST00000254719 ADAMTS3O15072 1205 aa10.86□□□□□ -0.67
RPA1-201ENST00000254719 PFKFB2O60825 505 aa10.86□□□□□ -0.67
RPA1-201ENST00000254719 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.86□□□□□ -0.67
RPA1-201ENST00000254719 LEO1Q8WVC0 666 aaPredicted RBP10.86□□□□□ -0.67
RPA1-201ENST00000254719 EPB41L4AQ9HCS5 686 aaPredicted RBP10.86□□□□□ -0.67
RPA1-201ENST00000254719 PIH1D3Q9NQM4 214 aaKnown RBP10.86□□□□□ -0.67
RPA1-201ENST00000254719 CYP46A1Q9Y6A2 500 aa10.86□□□□□ -0.67
RPA1-201ENST00000254719 OFD1O75665 1012 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.85□□□□□ -0.67
RPA1-201ENST00000254719 PDCL3Q9H2J4 239 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 NHSQ6T4R5 1651 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 H3BQV1 296 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 TPM3P06753 285 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 HS1BP3Q53T59 392 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 IFFO2Q5TF58 517 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 CYB5R4Q7L1T6 521 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 ZSCAN30Q86W11 494 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 ZAP70P43403 619 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 IQCB1Q15051 598 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 NTRK3Q16288 839 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 TBC1D10CQ8IV04 446 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 XAGE2Q96GT9 111 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 FSD1Q9BTV5 496 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 CWC25Q9NXE8 425 aaPredicted RBP10.85□□□□□ -0.67
RPA1-201ENST00000254719 APOBRQ0VD83 1088 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 ZBTB38Q8NAP3 1195 aaPredicted RBP10.85□□□□□ -0.67
RPA1-201ENST00000254719 ZKSCAN5Q9Y2L8 839 aa10.85□□□□□ -0.67
RPA1-201ENST00000254719 FANCGO15287 622 aa10.84□□□□□ -0.67
RPA1-201ENST00000254719 FGAP02671 866 aa10.84□□□□□ -0.67
RPA1-201ENST00000254719 STK3Q13188 491 aa10.84□□□□□ -0.67
RPA1-201ENST00000254719 GIGYF2Q6Y7W6 1299 aaKnown RBP10.84□□□□□ -0.67
RPA1-201ENST00000254719 ZNF710Q8N1W2 664 aa10.84□□□□□ -0.67
RPA1-201ENST00000254719 DSCC1Q9BVC3 393 aa10.84□□□□□ -0.67
RPA1-201ENST00000254719 CDHR2Q9BYE9 1310 aa10.84□□□□□ -0.67
RPA1-201ENST00000254719 DUOX1Q9NRD9 1551 aa10.84□□□□□ -0.67
RPA1-201ENST00000254719 PCCAP05165 728 aaPredicted RBP10.84□□□□□ -0.67
RPA1-201ENST00000254719 TFIP11Q9UBB9 837 aaKnown RBP10.84□□□□□ -0.67
RPA1-201ENST00000254719 MAP3K15Q6ZN16 1313 aa10.84□□□□□ -0.67
RPA1-201ENST00000254719 ANKRD1Q15327 319 aa10.84□□□□□ -0.67
RPA1-201ENST00000254719 BTG4Q9NY30 223 aa10.84□□□□□ -0.67
RPA1-201ENST00000254719 FIBPO43427 364 aa10.83□□□□□ -0.68
RPA1-201ENST00000254719 TOM1L2Q6ZVM7 507 aa10.83□□□□□ -0.68
RPA1-201ENST00000254719 CCDC85AQ96PX6 553 aaPredicted RBP10.83□□□□□ -0.68
RPA1-201ENST00000254719 SH2B1Q9NRF2 756 aaPredicted RBP10.83□□□□□ -0.68
RPA1-201ENST00000254719 UBR3Q6ZT12 1888 aa10.83□□□□□ -0.68
RPA1-201ENST00000254719 MARCH10Q8NA82 808 aaPredicted RBP10.83□□□□□ -0.68
RPA1-201ENST00000254719 ZSCAN31Q96LW9 406 aaPredicted RBP10.83□□□□□ -0.68
RPA1-201ENST00000254719 NEK1Q96PY6 1258 aa10.83□□□□□ -0.68
RPA1-201ENST00000254719 PYCARDQ9ULZ3 195 aa10.83□□□□□ -0.68
RPA1-201ENST00000254719 ADAMTSL1Q8N6G6 1762 aa10.83□□□□□ -0.68
RPA1-201ENST00000254719 AIFM3Q96NN9 605 aa10.83□□□□□ -0.68
RPA1-201ENST00000254719 DNAJC2Q99543 621 aaKnown RBP10.83□□□□□ -0.68
RPA1-201ENST00000254719 NRBP1Q9UHY1 535 aa10.83□□□□□ -0.68
RPA1-201ENST00000254719 EIF5P55010 431 aaKnown RBP10.83□□□□□ -0.68
RPA1-201ENST00000254719 BRF1Q92994 677 aa10.83□□□□□ -0.68
RPA1-201ENST00000254719 PRDM11Q9NQV5 511 aa10.83□□□□□ -0.68
RPA1-201ENST00000254719 SPTLC3Q9NUV7 552 aa10.83□□□□□ -0.68
RPA1-201ENST00000254719 MAST2Q6P0Q8 1798 aa10.82□□□□□ -0.68
RPA1-201ENST00000254719 RANBP6O60518 1105 aaKnown RBP10.82□□□□□ -0.68
RPA1-201ENST00000254719 CCDC144BQ3MJ40 725 aa10.82□□□□□ -0.68
RPA1-201ENST00000254719 CCDC144CPQ8IYA2 1237 aa10.82□□□□□ -0.68
RPA1-201ENST00000254719 USP25Q9UHP3 1055 aa10.82□□□□□ -0.68
RPA1-201ENST00000254719 MROH7-TTC4A0A0A0MT08 1334 aa10.82□□□□□ -0.68
RPA1-201ENST00000254719 CDC27P30260 824 aa10.82□□□□□ -0.68
RPA1-201ENST00000254719 NBPF11Q86T75 865 aa10.82□□□□□ -0.68
RPA1-201ENST00000254719 PLCD3Q8N3E9 789 aa10.82□□□□□ -0.68
RPA1-201ENST00000254719 ZNF512BQ96KM6 892 aaPredicted RBP10.82□□□□□ -0.68
RPA1-201ENST00000254719 MED15Q96RN5 788 aa10.82□□□□□ -0.68
RPA1-201ENST00000254719 CCDC39Q9UFE4 941 aa10.82□□□□□ -0.68
RPA1-201ENST00000254719 CCDC9Q9Y3X0 531 aaKnown RBP10.82□□□□□ -0.68
RPA1-201ENST00000254719 SF3A1Q15459 793 aaKnown RBP10.82□□□□□ -0.68
RPA1-201ENST00000254719 CCDC183Q5T5S1 534 aa10.82□□□□□ -0.68
RPA1-201ENST00000254719 PLA2G4DQ86XP0 818 aa10.82□□□□□ -0.68
RPA1-201ENST00000254719 ERCC4Q92889 916 aaPredicted RBP10.82□□□□□ -0.68
RPA1-201ENST00000254719 HELLSQ9NRZ9 838 aa10.82□□□□□ -0.68
RPA1-201ENST00000254719 IL15P40933 162 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms