RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 TTC6Q86TZ1 520 aa18.37■□□□□ 0.53
RFX1-201ENST00000254325 ANKRD18AQ8IVF6 992 aa18.37■□□□□ 0.53
RFX1-201ENST00000254325 RFX7Q2KHR2 1363 aa18.37■□□□□ 0.53
RFX1-201ENST00000254325 ATP2B1P20020 1258 aa18.37■□□□□ 0.53
RFX1-201ENST00000254325 UBAC1Q9BSL1 405 aa18.37■□□□□ 0.53
RFX1-201ENST00000254325 MARF1Q9Y4F3 1742 aaKnown RBP18.37■□□□□ 0.53
RFX1-201ENST00000254325 ZNF532Q9HCE3 1301 aa18.37■□□□□ 0.53
RFX1-201ENST00000254325 FAM98CQ17RN3 349 aaKnown RBP18.37■□□□□ 0.53
RFX1-201ENST00000254325 LEO1Q8WVC0 666 aaPredicted RBP18.37■□□□□ 0.53
RFX1-201ENST00000254325 PFKFB2O60825 505 aa18.36■□□□□ 0.53
RFX1-201ENST00000254325 CCAR1Q8IX12 1150 aaKnown RBP18.36■□□□□ 0.53
RFX1-201ENST00000254325 TRIM22Q8IYM9 498 aa18.36■□□□□ 0.53
RFX1-201ENST00000254325 GOLGA8AA7E2F4 631 aa18.36■□□□□ 0.53
RFX1-201ENST00000254325 PPP1R9BQ96SB3 815 aa18.36■□□□□ 0.53
RFX1-201ENST00000254325 SLC12A7Q9Y666 1083 aa18.36■□□□□ 0.53
RFX1-201ENST00000254325 MROH5Q6ZUA9 1318 aa18.36■□□□□ 0.53
RFX1-201ENST00000254325 USP54Q70EL1 1684 aa18.36■□□□□ 0.53
RFX1-201ENST00000254325 KDM4FA0A1W2PPD8 638 aa18.36■□□□□ 0.53
RFX1-201ENST00000254325 MBD4O95243 580 aa18.36■□□□□ 0.53
RFX1-201ENST00000254325 CCDC82Q8N4S0 544 aa18.36■□□□□ 0.53
RFX1-201ENST00000254325 FSIP1Q8NA03 581 aa18.36■□□□□ 0.53
RFX1-201ENST00000254325 KCNB2Q92953 911 aa18.36■□□□□ 0.53
RFX1-201ENST00000254325 PLEKHG2Q9H7P9 1386 aa18.35■□□□□ 0.53
RFX1-201ENST00000254325 ERVV-1B6SEH8 477 aa18.35■□□□□ 0.53
RFX1-201ENST00000254325 TSGA10IPQ3SY00 556 aa18.35■□□□□ 0.53
RFX1-201ENST00000254325 SLC4A4Q9Y6R1 1079 aa18.35■□□□□ 0.53
RFX1-201ENST00000254325 RXRAP19793 462 aa18.35■□□□□ 0.53
RFX1-201ENST00000254325 MFSD6Q6ZSS7 791 aa18.35■□□□□ 0.53
RFX1-201ENST00000254325 MIGA1Q8NAN2 632 aa18.35■□□□□ 0.53
RFX1-201ENST00000254325 PUS7LQ9H0K6 701 aaKnown RBP18.35■□□□□ 0.53
RFX1-201ENST00000254325 SCARF1Q14162 830 aa18.35■□□□□ 0.53
RFX1-201ENST00000254325 USPL1Q5W0Q7 1092 aa18.35■□□□□ 0.53
RFX1-201ENST00000254325 SPATA5Q8NB90 893 aa18.35■□□□□ 0.53
RFX1-201ENST00000254325 UBAP1LF5GYI3 381 aa18.34■□□□□ 0.53
RFX1-201ENST00000254325 NRDCO43847 1150 aa18.34■□□□□ 0.53
RFX1-201ENST00000254325 CYP7A1P22680 504 aa18.34■□□□□ 0.53
RFX1-201ENST00000254325 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.34■□□□□ 0.53
RFX1-201ENST00000254325 B4E1Z4 1266 aa18.34■□□□□ 0.53
RFX1-201ENST00000254325 PDE6AP16499 860 aa18.33■□□□□ 0.53
RFX1-201ENST00000254325 OTUD7BQ6GQQ9 843 aa18.33■□□□□ 0.53
RFX1-201ENST00000254325 TMEM87AQ8NBN3 555 aa18.33■□□□□ 0.53
RFX1-201ENST00000254325 SEC31BQ9NQW1 1179 aa18.33■□□□□ 0.53
RFX1-201ENST00000254325 CDHR2Q9BYE9 1310 aa18.33■□□□□ 0.53
RFX1-201ENST00000254325 ZBTB43O43298 467 aa18.33■□□□□ 0.52
RFX1-201ENST00000254325 IARSP41252 1262 aaKnown RBP18.33■□□□□ 0.52
RFX1-201ENST00000254325 IL17RAQ96F46 866 aa18.33■□□□□ 0.52
RFX1-201ENST00000254325 NOL10Q9BSC4 688 aaKnown RBP18.33■□□□□ 0.52
RFX1-201ENST00000254325 ARMT1Q9H993 441 aa18.33■□□□□ 0.52
RFX1-201ENST00000254325 TRPM3Q9HCF6 1732 aaPredicted RBP18.33■□□□□ 0.52
RFX1-201ENST00000254325 PALLDQ8WX93 1383 aa18.33■□□□□ 0.52
RFX1-201ENST00000254325 LIG1P18858 919 aa18.33■□□□□ 0.52
RFX1-201ENST00000254325 MCAMP43121 646 aa18.33■□□□□ 0.52
RFX1-201ENST00000254325 STOX1Q6ZVD7 989 aa18.33■□□□□ 0.52
RFX1-201ENST00000254325 NBPF5PQ86XG9 351 aaPredicted RBP18.33■□□□□ 0.52
RFX1-201ENST00000254325 NAT10Q9H0A0 1025 aaKnown RBP18.33■□□□□ 0.52
RFX1-201ENST00000254325 TYRO3Q06418 890 aa18.32■□□□□ 0.52
RFX1-201ENST00000254325 SUSD4Q5VX71 490 aa18.32■□□□□ 0.52
RFX1-201ENST00000254325 JMYQ8N9B5 988 aa18.32■□□□□ 0.52
RFX1-201ENST00000254325 ZNF274Q96GC6 653 aaPredicted RBP18.32■□□□□ 0.52
RFX1-201ENST00000254325 PDIA3P30101 505 aaKnown RBP18.32■□□□□ 0.52
RFX1-201ENST00000254325 ANO6Q4KMQ2 910 aa18.32■□□□□ 0.52
RFX1-201ENST00000254325 PKNOX2Q96KN3 472 aa18.32■□□□□ 0.52
RFX1-201ENST00000254325 ALG1Q9BT22 464 aa18.32■□□□□ 0.52
RFX1-201ENST00000254325 PLA2G12BQ9BX93 195 aa18.32■□□□□ 0.52
RFX1-201ENST00000254325 NAA16Q6N069 864 aaPredicted RBP18.31■□□□□ 0.52
RFX1-201ENST00000254325 NSUN7Q8NE18 718 aaKnown RBP18.31■□□□□ 0.52
RFX1-201ENST00000254325 SETDB2Q96T68 719 aa18.31■□□□□ 0.52
RFX1-201ENST00000254325 CSF1RP07333 972 aa18.31■□□□□ 0.52
RFX1-201ENST00000254325 ZNF165P49910 485 aa18.31■□□□□ 0.52
RFX1-201ENST00000254325 FAM200AQ8TCP9 573 aa18.31■□□□□ 0.52
RFX1-201ENST00000254325 RNF41Q9H4P4 317 aaPredicted RBP18.31■□□□□ 0.52
RFX1-201ENST00000254325 SNAP23O00161 211 aa18.31■□□□□ 0.52
RFX1-201ENST00000254325 HS1BP3Q53T59 392 aa18.31■□□□□ 0.52
RFX1-201ENST00000254325 COL15A1P39059 1388 aa18.3■□□□□ 0.52
RFX1-201ENST00000254325 ALDH8A1Q9H2A2 487 aaPredicted RBP18.3■□□□□ 0.52
RFX1-201ENST00000254325 GPHNQ9NQX3 736 aaPredicted RBP18.3■□□□□ 0.52
RFX1-201ENST00000254325 ANGEL1Q9UNK9 670 aaKnown RBP18.3■□□□□ 0.52
RFX1-201ENST00000254325 RIPOR2Q9Y4F9 1068 aa18.3■□□□□ 0.52
RFX1-201ENST00000254325 TPM3P06753 285 aa18.3■□□□□ 0.52
RFX1-201ENST00000254325 KCNQ4P56696 695 aa18.3■□□□□ 0.52
RFX1-201ENST00000254325 AMOTL1Q8IY63 956 aa18.3■□□□□ 0.52
RFX1-201ENST00000254325 ZNF830Q96NB3 372 aaPredicted RBP18.3■□□□□ 0.52
RFX1-201ENST00000254325 SLC26A6Q9BXS9 759 aa18.3■□□□□ 0.52
RFX1-201ENST00000254325 ZKSCAN5Q9Y2L8 839 aa18.3■□□□□ 0.52
RFX1-201ENST00000254325 XBP1P17861 261 aa18.3■□□□□ 0.52
RFX1-201ENST00000254325 ADD2P35612 726 aa18.3■□□□□ 0.52
RFX1-201ENST00000254325 CCDC34Q96HJ3 373 aa18.3■□□□□ 0.52
RFX1-201ENST00000254325 NLRP3Q96P20 1036 aa18.3■□□□□ 0.52
RFX1-201ENST00000254325 CTAGE5O15320 804 aa18.3■□□□□ 0.52
RFX1-201ENST00000254325 BCAMP50895 628 aa18.3■□□□□ 0.52
RFX1-201ENST00000254325 PIH1D3Q9NQM4 214 aaKnown RBP18.3■□□□□ 0.52
RFX1-201ENST00000254325 RANBP6O60518 1105 aaKnown RBP18.29■□□□□ 0.52
RFX1-201ENST00000254325 SSRP1Q08945 709 aaKnown RBP18.29■□□□□ 0.52
RFX1-201ENST00000254325 KRT23Q9C075 422 aa18.29■□□□□ 0.52
RFX1-201ENST00000254325 WWC3Q9ULE0 1092 aa18.29■□□□□ 0.52
RFX1-201ENST00000254325 PHRF1Q9P1Y6 1649 aaKnown RBP18.29■□□□□ 0.52
RFX1-201ENST00000254325 TICAM2Q86XR7 235 aa18.29■□□□□ 0.52
RFX1-201ENST00000254325 WASF1Q92558 559 aa18.29■□□□□ 0.52
RFX1-201ENST00000254325 CNNM2Q9H8M5 875 aa18.29■□□□□ 0.52
RFX1-201ENST00000254325 UBE3CQ15386 1083 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms