RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 PNPLA6Q8IY17 1366 aa17.26■□□□□ 0.35
UBE4B-201ENST00000253251 LOC102724428A0A0B4J2F2 783 aa17.25■□□□□ 0.35
UBE4B-201ENST00000253251 SIK1P57059 783 aa17.25■□□□□ 0.35
UBE4B-201ENST00000253251 ERMNQ8TAM6 284 aa17.25■□□□□ 0.35
UBE4B-201ENST00000253251 PDCL3Q9H2J4 239 aa17.25■□□□□ 0.35
UBE4B-201ENST00000253251 C6orf50Q9HD87 102 aa17.25■□□□□ 0.35
UBE4B-201ENST00000253251 ZNF335Q9H4Z2 1342 aaPredicted RBP17.25■□□□□ 0.35
UBE4B-201ENST00000253251 RAB3GAP1Q15042 981 aa17.25■□□□□ 0.35
UBE4B-201ENST00000253251 LRRC2Q9BYS8 371 aa17.25■□□□□ 0.35
UBE4B-201ENST00000253251 SFPQP23246 707 aaKnown RBP eCLIP17.25■□□□□ 0.35
UBE4B-201ENST00000253251 ALDH1B1P30837 517 aa17.25■□□□□ 0.35
UBE4B-201ENST00000253251 DSCC1Q9BVC3 393 aa17.25■□□□□ 0.35
UBE4B-201ENST00000253251 SLC27A2O14975 620 aa17.25■□□□□ 0.35
UBE4B-201ENST00000253251 GIGYF2Q6Y7W6 1299 aaKnown RBP17.25■□□□□ 0.35
UBE4B-201ENST00000253251 MIGA1Q8NAN2 632 aa17.25■□□□□ 0.35
UBE4B-201ENST00000253251 TCEANC2Q96MN5 208 aa17.25■□□□□ 0.35
UBE4B-201ENST00000253251 TNS3Q68CZ2 1445 aa17.24■□□□□ 0.35
UBE4B-201ENST00000253251 CIAO1O76071 339 aa17.24■□□□□ 0.35
UBE4B-201ENST00000253251 MRPS27Q92552 414 aaKnown RBP17.24■□□□□ 0.35
UBE4B-201ENST00000253251 VAT1LQ9HCJ6 419 aa17.24■□□□□ 0.35
UBE4B-201ENST00000253251 NEXMIFQ5QGS0 1516 aa17.24■□□□□ 0.35
UBE4B-201ENST00000253251 RPS8P62241 208 aaKnown RBP17.24■□□□□ 0.35
UBE4B-201ENST00000253251 FILIP1Q7Z7B0 1213 aa17.24■□□□□ 0.35
UBE4B-201ENST00000253251 BCORL1Q5H9F3 1711 aa17.24■□□□□ 0.35
UBE4B-201ENST00000253251 TNNI2P48788 182 aa17.24■□□□□ 0.35
UBE4B-201ENST00000253251 TTLL12Q14166 644 aaPredicted RBP17.24■□□□□ 0.35
UBE4B-201ENST00000253251 ZNF594Q96JF6 807 aaPredicted RBP17.24■□□□□ 0.35
UBE4B-201ENST00000253251 KIAA1210Q9ULL0 1709 aa17.24■□□□□ 0.35
UBE4B-201ENST00000253251 NOM1Q5C9Z4 860 aaKnown RBP17.24■□□□□ 0.35
UBE4B-201ENST00000253251 ZSCAN30Q86W11 494 aa17.24■□□□□ 0.35
UBE4B-201ENST00000253251 FAM114A1Q8IWE2 563 aa17.24■□□□□ 0.35
UBE4B-201ENST00000253251 KLHDC4Q8TBB5 520 aa17.24■□□□□ 0.35
UBE4B-201ENST00000253251 ATG3Q9NT62 314 aa17.24■□□□□ 0.35
UBE4B-201ENST00000253251 HEG1Q9ULI3 1381 aa17.23■□□□□ 0.35
UBE4B-201ENST00000253251 SYKP43405 635 aa17.23■□□□□ 0.35
UBE4B-201ENST00000253251 GSDMDP57764 484 aa17.23■□□□□ 0.35
UBE4B-201ENST00000253251 HSP90B2PQ58FF3 399 aa17.23■□□□□ 0.35
UBE4B-201ENST00000253251 SPATA5Q8NB90 893 aa17.23■□□□□ 0.35
UBE4B-201ENST00000253251 RRP36Q96EU6 259 aaKnown RBP17.23■□□□□ 0.35
UBE4B-201ENST00000253251 NAP1L4Q99733 375 aaKnown RBP17.23■□□□□ 0.35
UBE4B-201ENST00000253251 TRIM75PA6NK02 468 aa17.23■□□□□ 0.35
UBE4B-201ENST00000253251 GPAA1O43292 621 aa17.23■□□□□ 0.35
UBE4B-201ENST00000253251 GNA11P29992 359 aa17.23■□□□□ 0.35
UBE4B-201ENST00000253251 TTLL7Q6ZT98 887 aa17.23■□□□□ 0.35
UBE4B-201ENST00000253251 DNAI2Q9GZS0 605 aa17.23■□□□□ 0.35
UBE4B-201ENST00000253251 SH2D4AQ9H788 454 aa17.23■□□□□ 0.35
UBE4B-201ENST00000253251 STAP2Q9UGK3 403 aa17.23■□□□□ 0.35
UBE4B-201ENST00000253251 PTPDC1A2A3K4 754 aa17.23■□□□□ 0.35
UBE4B-201ENST00000253251 ESPNB1AK53 854 aa17.23■□□□□ 0.35
UBE4B-201ENST00000253251 H0YIN7 160 aa17.23■□□□□ 0.35
UBE4B-201ENST00000253251 TEX11Q8IYF3 940 aa17.23■□□□□ 0.35
UBE4B-201ENST00000253251 ERVV-1B6SEH8 477 aa17.22■□□□□ 0.35
UBE4B-201ENST00000253251 F8W031 263 aaPredicted RBP17.22■□□□□ 0.35
UBE4B-201ENST00000253251 ZSCAN12O43309 604 aa17.22■□□□□ 0.35
UBE4B-201ENST00000253251 PICALMQ13492 652 aa17.22■□□□□ 0.35
UBE4B-201ENST00000253251 ZFYVE27Q5T4F4 411 aa17.22■□□□□ 0.35
UBE4B-201ENST00000253251 APOBRQ0VD83 1088 aa17.21■□□□□ 0.35
UBE4B-201ENST00000253251 GDPD2Q9HCC8 539 aa17.21■□□□□ 0.35
UBE4B-201ENST00000253251 SNX14Q9Y5W7 946 aa17.21■□□□□ 0.35
UBE4B-201ENST00000253251 HSPA4P34932 840 aa17.21■□□□□ 0.35
UBE4B-201ENST00000253251 IQCEQ6IPM2 695 aa17.21■□□□□ 0.35
UBE4B-201ENST00000253251 CCDC112Q8NEF3 446 aa17.21■□□□□ 0.35
UBE4B-201ENST00000253251 OSBPL3Q9H4L5 887 aa17.21■□□□□ 0.35
UBE4B-201ENST00000253251 PDE6BP35913 854 aa17.21■□□□□ 0.35
UBE4B-201ENST00000253251 BAG6P46379 1132 aa17.21■□□□□ 0.35
UBE4B-201ENST00000253251 RAB11FIP4Q86YS3 637 aa17.21■□□□□ 0.35
UBE4B-201ENST00000253251 CKAP2LQ8IYA6 745 aa17.21■□□□□ 0.35
UBE4B-201ENST00000253251 ARID3AQ99856 593 aa17.21■□□□□ 0.35
UBE4B-201ENST00000253251 NEURL4Q96JN8 1562 aa17.21■□□□□ 0.35
UBE4B-201ENST00000253251 TOP1P11387 765 aaKnown RBP17.21■□□□□ 0.35
UBE4B-201ENST00000253251 ZNF165P49910 485 aa17.21■□□□□ 0.35
UBE4B-201ENST00000253251 NAPAP54920 295 aa17.21■□□□□ 0.35
UBE4B-201ENST00000253251 FRMPD1Q5SYB0 1578 aa17.21■□□□□ 0.34
UBE4B-201ENST00000253251 TTLL5Q6EMB2 1281 aa17.2■□□□□ 0.34
UBE4B-201ENST00000253251 LRSAM1Q6UWE0 723 aa17.2■□□□□ 0.34
UBE4B-201ENST00000253251 FAM196AQ6ZSG2 479 aa17.2■□□□□ 0.34
UBE4B-201ENST00000253251 ANGEL1Q9UNK9 670 aaKnown RBP17.2■□□□□ 0.34
UBE4B-201ENST00000253251 PTPRMP28827 1452 aa17.2■□□□□ 0.34
UBE4B-201ENST00000253251 KRT2P35908 639 aa17.2■□□□□ 0.34
UBE4B-201ENST00000253251 DPP8Q6V1X1 898 aaPredicted RBP17.2■□□□□ 0.34
UBE4B-201ENST00000253251 TICAM2Q86XR7 235 aa17.2■□□□□ 0.34
UBE4B-201ENST00000253251 ZNF772Q68DY9 489 aaPredicted RBP17.2■□□□□ 0.34
UBE4B-201ENST00000253251 SPTLC2O15270 562 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 SEC24BO95487 1268 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 POTEJP0CG39 1038 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 TRIM21P19474 475 aaKnown RBP17.19■□□□□ 0.34
UBE4B-201ENST00000253251 KLHL10Q6JEL2 608 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 TMC4Q7Z404 712 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 HEATR3Q7Z4Q2 680 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 GLT8D2Q9H1C3 349 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 DIP2BQ9P265 1576 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 B4DLN1 442 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 MRPL12P52815 198 aaKnown RBP17.19■□□□□ 0.34
UBE4B-201ENST00000253251 VPS36Q86VN1 386 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 UNC5CLQ8IV45 518 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 PTPRUQ92729 1446 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 RIMBP2O15034 1052 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 APBA3O96018 575 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 NF2P35240 595 aa17.19■□□□□ 0.34
UBE4B-201ENST00000253251 USP48Q86UV5 1035 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms