RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 SYCP1Q15431 976 aa19.63■□□□□ 0.73
ACTN4-201ENST00000252699 ODF2Q5BJF6 829 aa19.63■□□□□ 0.73
ACTN4-201ENST00000252699 TEX11Q8IYF3 940 aa19.63■□□□□ 0.73
ACTN4-201ENST00000252699 CCDC148Q8NFR7 591 aa19.63■□□□□ 0.73
ACTN4-201ENST00000252699 ARGLU1Q9NWB6 273 aaPredicted RBP19.63■□□□□ 0.73
ACTN4-201ENST00000252699 PPP4R3BQ5MIZ7 849 aa19.63■□□□□ 0.73
ACTN4-201ENST00000252699 SYKP43405 635 aa19.63■□□□□ 0.73
ACTN4-201ENST00000252699 ZFYVE27Q5T4F4 411 aa19.63■□□□□ 0.73
ACTN4-201ENST00000252699 PNPLA6Q8IY17 1366 aa19.62■□□□□ 0.73
ACTN4-201ENST00000252699 PIGBQ92521 554 aa19.62■□□□□ 0.73
ACTN4-201ENST00000252699 TRPC5Q9UL62 973 aaPredicted RBP19.62■□□□□ 0.73
ACTN4-201ENST00000252699 HSPA4P34932 840 aa19.62■□□□□ 0.73
ACTN4-201ENST00000252699 STX1AQ16623 288 aa19.62■□□□□ 0.73
ACTN4-201ENST00000252699 JDP2Q8WYK2 163 aa19.62■□□□□ 0.73
ACTN4-201ENST00000252699 ARHGEF40Q8TER5 1519 aa19.62■□□□□ 0.73
ACTN4-201ENST00000252699 WDR78Q5VTH9 848 aa19.62■□□□□ 0.73
ACTN4-201ENST00000252699 FAM177A1Q8N128 213 aaPredicted RBP19.62■□□□□ 0.73
ACTN4-201ENST00000252699 WDR66Q8TBY9 1149 aa19.62■□□□□ 0.73
ACTN4-201ENST00000252699 VEZTQ9HBM0 779 aa19.62■□□□□ 0.73
ACTN4-201ENST00000252699 USP31Q70CQ4 1352 aa19.62■□□□□ 0.73
ACTN4-201ENST00000252699 MARCKSP29966 332 aaPredicted RBP19.62■□□□□ 0.73
ACTN4-201ENST00000252699 ZNF532Q9HCE3 1301 aa19.62■□□□□ 0.73
ACTN4-201ENST00000252699 NOM1Q5C9Z4 860 aaKnown RBP19.61■□□□□ 0.73
ACTN4-201ENST00000252699 ISM2Q6H9L7 571 aa19.61■□□□□ 0.73
ACTN4-201ENST00000252699 CALML4Q96GE6 196 aa19.61■□□□□ 0.73
ACTN4-201ENST00000252699 DACT1Q9NYF0 836 aa19.61■□□□□ 0.73
ACTN4-201ENST00000252699 HEG1Q9ULI3 1381 aa19.61■□□□□ 0.73
ACTN4-201ENST00000252699 BMP15O95972 392 aa19.61■□□□□ 0.73
ACTN4-201ENST00000252699 SFPQP23246 707 aaKnown RBP eCLIP19.61■□□□□ 0.731e-6■■■□□ 17.2
ACTN4-201ENST00000252699 IDEP14735 1019 aa19.61■□□□□ 0.73
ACTN4-201ENST00000252699 ZSCAN30Q86W11 494 aa19.61■□□□□ 0.73
ACTN4-201ENST00000252699 LUC7LQ9NQ29 371 aaKnown RBP19.61■□□□□ 0.73
ACTN4-201ENST00000252699 FAM182BQ5T319 152 aa19.61■□□□□ 0.73
ACTN4-201ENST00000252699 TTC6Q86TZ1 520 aa19.61■□□□□ 0.73
ACTN4-201ENST00000252699 MRPS27Q92552 414 aaKnown RBP19.61■□□□□ 0.73
ACTN4-201ENST00000252699 QTRT2Q9H974 415 aaKnown RBP19.61■□□□□ 0.73
ACTN4-201ENST00000252699 EHMT1Q9H9B1 1298 aa19.61■□□□□ 0.73
ACTN4-201ENST00000252699 PTPRMP28827 1452 aa19.6■□□□□ 0.73
ACTN4-201ENST00000252699 GREM2Q9H772 168 aa19.6■□□□□ 0.73
ACTN4-201ENST00000252699 NEXMIFQ5QGS0 1516 aa19.6■□□□□ 0.73
ACTN4-201ENST00000252699 CPSF1Q10570 1443 aaKnown RBP19.6■□□□□ 0.73
ACTN4-201ENST00000252699 NAPAP54920 295 aa19.6■□□□□ 0.73
ACTN4-201ENST00000252699 USPL1Q5W0Q7 1092 aa19.6■□□□□ 0.73
ACTN4-201ENST00000252699 PRDM1O75626 825 aa19.6■□□□□ 0.73
ACTN4-201ENST00000252699 TMEM87BQ96K49 555 aa19.6■□□□□ 0.73
ACTN4-201ENST00000252699 PDCL3Q9H2J4 239 aa19.6■□□□□ 0.73
ACTN4-201ENST00000252699 KANK3Q6NY19 840 aa19.59■□□□□ 0.73
ACTN4-201ENST00000252699 MED14O60244 1454 aa19.59■□□□□ 0.73
ACTN4-201ENST00000252699 TRIM75PA6NK02 468 aa19.59■□□□□ 0.73
ACTN4-201ENST00000252699 SPTLC2O15270 562 aa19.59■□□□□ 0.73
ACTN4-201ENST00000252699 DPP8Q6V1X1 898 aaPredicted RBP19.59■□□□□ 0.73
ACTN4-201ENST00000252699 PUS3Q9BZE2 481 aaKnown RBP19.59■□□□□ 0.73
ACTN4-201ENST00000252699 SAP30BPQ9UHR5 308 aaKnown RBP19.59■□□□□ 0.73
ACTN4-201ENST00000252699 ANGEL1Q9UNK9 670 aaKnown RBP19.59■□□□□ 0.73
ACTN4-201ENST00000252699 A0A0D9SFI3 127 aa19.59■□□□□ 0.73
ACTN4-201ENST00000252699 WWC2Q6AWC2 1192 aa19.59■□□□□ 0.73
ACTN4-201ENST00000252699 SIRT2Q8IXJ6 389 aa19.59■□□□□ 0.73
ACTN4-201ENST00000252699 PYM1Q9BRP8 204 aaKnown RBP19.59■□□□□ 0.73
ACTN4-201ENST00000252699 UBA5Q9GZZ9 404 aa19.59■□□□□ 0.73
ACTN4-201ENST00000252699 AATFQ9NY61 560 aaKnown RBP eCLIP19.59■□□□□ 0.73
ACTN4-201ENST00000252699 FBXO3Q9UK99 471 aa19.59■□□□□ 0.73
ACTN4-201ENST00000252699 EPB41L2O43491 1005 aaKnown RBP19.58■□□□□ 0.73
ACTN4-201ENST00000252699 STAP2Q9UGK3 403 aa19.58■□□□□ 0.73
ACTN4-201ENST00000252699 RBM26Q5T8P6 1007 aaKnown RBP19.58■□□□□ 0.72
ACTN4-201ENST00000252699 LRSAM1Q6UWE0 723 aa19.58■□□□□ 0.72
ACTN4-201ENST00000252699 CALML3P27482 149 aa19.58■□□□□ 0.72
ACTN4-201ENST00000252699 LAMC1P11047 1609 aa19.58■□□□□ 0.72
ACTN4-201ENST00000252699 CAVIN2O95810 425 aa19.57■□□□□ 0.72
ACTN4-201ENST00000252699 NCOA5Q9HCD5 579 aaKnown RBP19.57■□□□□ 0.72
ACTN4-201ENST00000252699 CLIP2Q9UDT6 1046 aa19.57■□□□□ 0.72
ACTN4-201ENST00000252699 KCNQ4P56696 695 aa19.57■□□□□ 0.72
ACTN4-201ENST00000252699 H0YIN7 160 aa19.57■□□□□ 0.72
ACTN4-201ENST00000252699 AMPD3Q01432 767 aa19.57■□□□□ 0.72
ACTN4-201ENST00000252699 HAUS7Q99871 368 aa19.57■□□□□ 0.72
ACTN4-201ENST00000252699 DBNLQ9UJU6 430 aaKnown RBP19.57■□□□□ 0.72
ACTN4-201ENST00000252699 TOP1P11387 765 aaKnown RBP19.56■□□□□ 0.72
ACTN4-201ENST00000252699 SETD1BQ9UPS6 1966 aaKnown RBP19.56■□□□□ 0.72
ACTN4-201ENST00000252699 TSG101Q99816 390 aa19.56■□□□□ 0.72
ACTN4-201ENST00000252699 PTCH1Q13635 1447 aa19.56■□□□□ 0.72
ACTN4-201ENST00000252699 CCDC112Q8NEF3 446 aa19.56■□□□□ 0.72
ACTN4-201ENST00000252699 SEC62Q99442 399 aaKnown RBP19.56■□□□□ 0.72
ACTN4-201ENST00000252699 DSCC1Q9BVC3 393 aa19.56■□□□□ 0.72
ACTN4-201ENST00000252699 ADAMTS13Q76LX8 1427 aa19.56■□□□□ 0.72
ACTN4-201ENST00000252699 PPP1R12BO60237 982 aaPredicted RBP19.56■□□□□ 0.72
ACTN4-201ENST00000252699 GYG1P46976 350 aa19.55■□□□□ 0.72
ACTN4-201ENST00000252699 PTH1RQ03431 593 aa19.55■□□□□ 0.72
ACTN4-201ENST00000252699 TRAF1Q13077 416 aa19.55■□□□□ 0.72
ACTN4-201ENST00000252699 UNC5CLQ8IV45 518 aa19.55■□□□□ 0.72
ACTN4-201ENST00000252699 TNS3Q68CZ2 1445 aa19.55■□□□□ 0.72
ACTN4-201ENST00000252699 PDE8BO95263 885 aa19.55■□□□□ 0.72
ACTN4-201ENST00000252699 TM6SF1Q9BZW5 370 aa19.55■□□□□ 0.72
ACTN4-201ENST00000252699 TRMT1LQ7Z2T5 733 aaKnown RBP19.55■□□□□ 0.72
ACTN4-201ENST00000252699 BRAPQ7Z569 592 aa19.55■□□□□ 0.72
ACTN4-201ENST00000252699 OSBPL3Q9H4L5 887 aa19.55■□□□□ 0.72
ACTN4-201ENST00000252699 C6orf50Q9HD87 102 aa19.55■□□□□ 0.72
ACTN4-201ENST00000252699 ADCY5O95622 1261 aa19.54■□□□□ 0.72
ACTN4-201ENST00000252699 BCAMP50895 628 aa19.54■□□□□ 0.72
ACTN4-201ENST00000252699 RRP36Q96EU6 259 aaKnown RBP19.54■□□□□ 0.72
ACTN4-201ENST00000252699 DTNBO60941 627 aa19.54■□□□□ 0.72
ACTN4-201ENST00000252699 NCAPD2Q15021 1401 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms