RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 A0A0U1RQJ8 604 aa21.03■□□□□ 0.96
PTPN12-201ENST00000248594 GIMAP7Q8NHV1 300 aa21.03■□□□□ 0.96
PTPN12-201ENST00000248594 ATRIPQ8WXE1 791 aa21.03■□□□□ 0.96
PTPN12-201ENST00000248594 UBXN6Q9BZV1 441 aa21.03■□□□□ 0.96
PTPN12-201ENST00000248594 EFCAB6Q5THR3 1501 aa21.03■□□□□ 0.96
PTPN12-201ENST00000248594 KIF1BO60333 1816 aa21.03■□□□□ 0.96
PTPN12-201ENST00000248594 MPHOSPH8Q99549 860 aa21.03■□□□□ 0.96
PTPN12-201ENST00000248594 SLC24A3Q9HC58 644 aa21.03■□□□□ 0.96
PTPN12-201ENST00000248594 CCDC151A5D8V7 595 aa21.03■□□□□ 0.96
PTPN12-201ENST00000248594 ZNF569Q5MCW4 686 aa21.03■□□□□ 0.96
PTPN12-201ENST00000248594 GPATCH3Q96I76 525 aa21.03■□□□□ 0.96
PTPN12-201ENST00000248594 EHD4Q9H223 541 aa21.03■□□□□ 0.96
PTPN12-201ENST00000248594 MRFAP1Q9Y605 127 aa21.03■□□□□ 0.96
PTPN12-201ENST00000248594 ZNF396Q96N95 335 aaPredicted RBP21.02■□□□□ 0.96
PTPN12-201ENST00000248594 ZSCAN16Q9H4T2 348 aaPredicted RBP21.02■□□□□ 0.96
PTPN12-201ENST00000248594 ECHDC1Q9NTX5 307 aa21.02■□□□□ 0.96
PTPN12-201ENST00000248594 ABCC3O15438 1527 aa21.02■□□□□ 0.96
PTPN12-201ENST00000248594 CASP8Q14790 479 aa21.02■□□□□ 0.96
PTPN12-201ENST00000248594 TAF7Q15545 349 aaPredicted RBP21.02■□□□□ 0.96
PTPN12-201ENST00000248594 SCP2P22307 547 aa21.01■□□□□ 0.95
PTPN12-201ENST00000248594 VSNL1P62760 191 aa21.01■□□□□ 0.95
PTPN12-201ENST00000248594 CLIC6Q96NY7 704 aa21.01■□□□□ 0.95
PTPN12-201ENST00000248594 GJB4Q9NTQ9 266 aa21.01■□□□□ 0.95
PTPN12-201ENST00000248594 MAP3K9P80192 1104 aa21.01■□□□□ 0.95
PTPN12-201ENST00000248594 SETQ01105 290 aaPredicted RBP21.01■□□□□ 0.95
PTPN12-201ENST00000248594 MTHFSDQ2M296 383 aaKnown RBP21.01■□□□□ 0.95
PTPN12-201ENST00000248594 RNF40O75150 1001 aa21.01■□□□□ 0.95
PTPN12-201ENST00000248594 AMPHP49418 695 aa21.01■□□□□ 0.95
PTPN12-201ENST00000248594 ZNF589Q86UQ0 364 aaPredicted RBP21.01■□□□□ 0.95
PTPN12-201ENST00000248594 KAT2BQ92831 832 aa21.01■□□□□ 0.95
PTPN12-201ENST00000248594 TM6SF1Q9BZW5 370 aa21■□□□□ 0.95
PTPN12-201ENST00000248594 ZC3H13Q5T200 1668 aaKnown RBP21■□□□□ 0.95
PTPN12-201ENST00000248594 PTPDC1A2A3K4 754 aa21■□□□□ 0.95
PTPN12-201ENST00000248594 PSD3Q9NYI0 1048 aa21■□□□□ 0.95
PTPN12-201ENST00000248594 MKRN1Q9UHC7 482 aaKnown RBP21■□□□□ 0.95
PTPN12-201ENST00000248594 EFCAB13Q8IY85 973 aa21■□□□□ 0.95
PTPN12-201ENST00000248594 AFAP1L1Q8TED9 768 aa21■□□□□ 0.95
PTPN12-201ENST00000248594 ZNF622Q969S3 477 aaKnown RBP eCLIP21■□□□□ 0.956e-7■■□□□ 12.4
PTPN12-201ENST00000248594 CAMSAP1Q5T5Y3 1602 aa20.99■□□□□ 0.95
PTPN12-201ENST00000248594 PNPLA6Q8IY17 1366 aa20.99■□□□□ 0.95
PTPN12-201ENST00000248594 BEND6Q5SZJ8 279 aaPredicted RBP20.99■□□□□ 0.95
PTPN12-201ENST00000248594 AATKQ6ZMQ8 1374 aa20.99■□□□□ 0.95
PTPN12-201ENST00000248594 SCRN1Q12765 414 aa20.99■□□□□ 0.95
PTPN12-201ENST00000248594 BRD3Q15059 726 aa20.99■□□□□ 0.95
PTPN12-201ENST00000248594 GBP6Q6ZN66 633 aa20.99■□□□□ 0.95
PTPN12-201ENST00000248594 NEK1Q96PY6 1258 aa20.98■□□□□ 0.95
PTPN12-201ENST00000248594 HNRNPH1P31943 449 aaKnown RBP20.98■□□□□ 0.95
PTPN12-201ENST00000248594 HDGFL1Q5TGJ6 251 aa20.98■□□□□ 0.95
PTPN12-201ENST00000248594 RPAINQ86UA6 219 aa20.98■□□□□ 0.95
PTPN12-201ENST00000248594 CLIC4Q9Y696 253 aa20.98■□□□□ 0.95
PTPN12-201ENST00000248594 A0A087WUV0 522 aaPredicted RBP20.98■□□□□ 0.95
PTPN12-201ENST00000248594 GSPT2Q8IYD1 628 aaKnown RBP20.98■□□□□ 0.95
PTPN12-201ENST00000248594 TRMT44Q8IYL2 757 aaKnown RBP20.98■□□□□ 0.95
PTPN12-201ENST00000248594 RCOR1Q9UKL0 485 aa20.98■□□□□ 0.95
PTPN12-201ENST00000248594 CAPN7Q9Y6W3 813 aa20.98■□□□□ 0.95
PTPN12-201ENST00000248594 RSRC2Q7L4I2 434 aaKnown RBP20.97■□□□□ 0.95
PTPN12-201ENST00000248594 SSH3Q8TE77 659 aa20.97■□□□□ 0.95
PTPN12-201ENST00000248594 C9orf78Q9NZ63 289 aaPredicted RBP20.97■□□□□ 0.95
PTPN12-201ENST00000248594 ADGRB1O14514 1584 aa20.97■□□□□ 0.95
PTPN12-201ENST00000248594 ADCY9O60503 1353 aa20.97■□□□□ 0.95
PTPN12-201ENST00000248594 ARHGAP6O43182 974 aa20.97■□□□□ 0.95
PTPN12-201ENST00000248594 PPFIA4O75335 1185 aa20.97■□□□□ 0.95
PTPN12-201ENST00000248594 LMOD2Q6P5Q4 547 aa20.97■□□□□ 0.95
PTPN12-201ENST00000248594 MRPL44Q9H9J2 332 aaKnown RBP20.97■□□□□ 0.95
PTPN12-201ENST00000248594 EBAG9O00559 213 aa20.97■□□□□ 0.95
PTPN12-201ENST00000248594 ZNF202O95125 648 aa20.97■□□□□ 0.95
PTPN12-201ENST00000248594 SSBP05455 408 aaKnown RBP eCLIP20.97■□□□□ 0.95
PTPN12-201ENST00000248594 RDXP35241 583 aaKnown RBP20.97■□□□□ 0.95
PTPN12-201ENST00000248594 RPGRIP1LQ68CZ1 1315 aa20.96■□□□□ 0.95
PTPN12-201ENST00000248594 SOWAHDA6NJG2 315 aa20.96■□□□□ 0.95
PTPN12-201ENST00000248594 WASLO00401 505 aaPredicted RBP20.96■□□□□ 0.95
PTPN12-201ENST00000248594 KIRREL3Q8IZU9 778 aa20.96■□□□□ 0.95
PTPN12-201ENST00000248594 ANKZF1Q9H8Y5 726 aa20.96■□□□□ 0.95
PTPN12-201ENST00000248594 LRRIQ3A6PVS8 624 aaPredicted RBP20.96■□□□□ 0.95
PTPN12-201ENST00000248594 PSME1Q06323 249 aa20.96■□□□□ 0.95
PTPN12-201ENST00000248594 PNOCQ13519 176 aa20.96■□□□□ 0.95
PTPN12-201ENST00000248594 SRGAP1Q7Z6B7 1085 aa20.96■□□□□ 0.95
PTPN12-201ENST00000248594 TMED8Q6PL24 325 aaPredicted RBP20.95■□□□□ 0.95
PTPN12-201ENST00000248594 OLFM4Q6UX06 510 aa20.95■□□□□ 0.95
PTPN12-201ENST00000248594 SYNE3Q6ZMZ3 975 aa20.95■□□□□ 0.95
PTPN12-201ENST00000248594 KIF5CO60282 957 aa20.95■□□□□ 0.94
PTPN12-201ENST00000248594 IQUBQ8NA54 791 aa20.95■□□□□ 0.94
PTPN12-201ENST00000248594 ENGASEQ8NFI3 743 aa20.95■□□□□ 0.94
PTPN12-201ENST00000248594 MAP4K1Q92918 833 aa20.95■□□□□ 0.94
PTPN12-201ENST00000248594 FAM107BQ9H098 131 aa20.95■□□□□ 0.94
PTPN12-201ENST00000248594 ACBD3Q9H3P7 528 aa20.95■□□□□ 0.94
PTPN12-201ENST00000248594 TLR7Q9NYK1 1049 aaKnown RBP20.95■□□□□ 0.94
PTPN12-201ENST00000248594 FAM169AQ9Y6X4 670 aa20.95■□□□□ 0.94
PTPN12-201ENST00000248594 CBFA2T2O43439 604 aa20.95■□□□□ 0.94
PTPN12-201ENST00000248594 NEBLO76041 1014 aa20.95■□□□□ 0.94
PTPN12-201ENST00000248594 TUBB4AP04350 444 aa20.95■□□□□ 0.94
PTPN12-201ENST00000248594 INPP5BP32019 993 aa20.95■□□□□ 0.94
PTPN12-201ENST00000248594 KLHDC4Q8TBB5 520 aa20.95■□□□□ 0.94
PTPN12-201ENST00000248594 EVI5LQ96CN4 794 aa20.95■□□□□ 0.94
PTPN12-201ENST00000248594 CDC5LQ99459 802 aaKnown RBP20.95■□□□□ 0.94
PTPN12-201ENST00000248594 ESF1Q9H501 851 aaKnown RBP20.95■□□□□ 0.94
PTPN12-201ENST00000248594 EXOC5O00471 708 aa20.94■□□□□ 0.94
PTPN12-201ENST00000248594 MAP2K7O14733 419 aa20.94■□□□□ 0.94
PTPN12-201ENST00000248594 ZNF827Q17R98 1081 aa20.94■□□□□ 0.94
PTPN12-201ENST00000248594 SPECC1Q5M775 1068 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms