RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 KIF6Q6ZMV9 814 aa29.91■■■□□ 2.38
RAB40C-201ENST00000248139 CCDC73Q6ZRK6 1079 aa29.91■■■□□ 2.38
RAB40C-201ENST00000248139 PCDHA7Q9UN72 937 aa29.91■■■□□ 2.38
RAB40C-201ENST00000248139 CLIC4Q9Y696 253 aa29.91■■■□□ 2.38
RAB40C-201ENST00000248139 UBR2Q8IWV8 1755 aa29.91■■■□□ 2.38
RAB40C-201ENST00000248139 IQCB1Q15051 598 aa29.9■■■□□ 2.38
RAB40C-201ENST00000248139 CLIP2Q9UDT6 1046 aa29.9■■■□□ 2.38
RAB40C-201ENST00000248139 AKAP2Q9Y2D5 859 aa29.9■■■□□ 2.38
RAB40C-201ENST00000248139 ATP2B3Q16720 1220 aa29.9■■■□□ 2.38
RAB40C-201ENST00000248139 ITGA6P23229 1130 aa29.89■■■□□ 2.38
RAB40C-201ENST00000248139 HPS5Q9UPZ3 1129 aa29.89■■■□□ 2.38
RAB40C-201ENST00000248139 KINO60870 393 aaKnown RBP29.89■■■□□ 2.38
RAB40C-201ENST00000248139 PCCAP05165 728 aaPredicted RBP29.89■■■□□ 2.38
RAB40C-201ENST00000248139 GLIPR1L2Q4G1C9 344 aa29.89■■■□□ 2.38
RAB40C-201ENST00000248139 KLHL34Q8N239 644 aa29.89■■■□□ 2.38
RAB40C-201ENST00000248139 ZNF396Q96N95 335 aaPredicted RBP29.89■■■□□ 2.38
RAB40C-201ENST00000248139 KIF3AQ9Y496 699 aa29.89■■■□□ 2.38
RAB40C-201ENST00000248139 PARP4Q9UKK3 1724 aaKnown RBP29.89■■■□□ 2.38
RAB40C-201ENST00000248139 ZBTB38Q8NAP3 1195 aaPredicted RBP29.89■■■□□ 2.37
RAB40C-201ENST00000248139 ENGASEQ8NFI3 743 aa29.89■■■□□ 2.37
RAB40C-201ENST00000248139 HELBQ8NG08 1087 aaPredicted RBP29.89■■■□□ 2.37
RAB40C-201ENST00000248139 SLAIN2Q9P270 581 aa29.89■■■□□ 2.37
RAB40C-201ENST00000248139 NWD2Q9ULI1 1742 aa29.88■■■□□ 2.37
RAB40C-201ENST00000248139 ZSCAN25Q6NSZ9 544 aa29.88■■■□□ 2.37
RAB40C-201ENST00000248139 CACTINQ8WUQ7 758 aaKnown RBP29.88■■■□□ 2.37
RAB40C-201ENST00000248139 APPBP2Q92624 585 aa29.88■■■□□ 2.37
RAB40C-201ENST00000248139 AIFM3Q96NN9 605 aa29.88■■■□□ 2.37
RAB40C-201ENST00000248139 BCL11BQ9C0K0 894 aaPredicted RBP29.88■■■□□ 2.37
RAB40C-201ENST00000248139 INCENPQ9NQS7 918 aa29.88■■■□□ 2.37
RAB40C-201ENST00000248139 GOLGA6L19H0YKK7 550 aa29.88■■■□□ 2.37
RAB40C-201ENST00000248139 SNAP23O00161 211 aa29.88■■■□□ 2.37
RAB40C-201ENST00000248139 MB21D2Q8IYB1 491 aaPredicted RBP29.88■■■□□ 2.37
RAB40C-201ENST00000248139 ZNF710Q8N1W2 664 aa29.88■■■□□ 2.37
RAB40C-201ENST00000248139 PRIMPOLQ96LW4 560 aa29.88■■■□□ 2.37
RAB40C-201ENST00000248139 ORC3Q9UBD5 711 aaPredicted RBP29.88■■■□□ 2.37
RAB40C-201ENST00000248139 C8orf76Q96K31 380 aa29.87■■■□□ 2.37
RAB40C-201ENST00000248139 CNNM1Q9NRU3 951 aa29.87■■■□□ 2.37
RAB40C-201ENST00000248139 ZNF213O14771 459 aa29.87■■■□□ 2.37
RAB40C-201ENST00000248139 IDH1O75874 414 aaKnown RBP29.87■■■□□ 2.37
RAB40C-201ENST00000248139 CSF1RP07333 972 aa29.87■■■□□ 2.37
RAB40C-201ENST00000248139 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.87■■■□□ 2.37
RAB40C-201ENST00000248139 C16orf45Q96MC5 204 aaPredicted RBP29.87■■■□□ 2.37
RAB40C-201ENST00000248139 CTNNA3Q9UI47 895 aa29.87■■■□□ 2.37
RAB40C-201ENST00000248139 APPP05067 770 aa29.86■■■□□ 2.37
RAB40C-201ENST00000248139 SLC9C2Q5TAH2 1124 aa29.86■■■□□ 2.37
RAB40C-201ENST00000248139 TTLL11Q8NHH1 800 aa29.86■■■□□ 2.37
RAB40C-201ENST00000248139 SYTL4Q96C24 671 aaPredicted RBP29.86■■■□□ 2.37
RAB40C-201ENST00000248139 RIPOR2Q9Y4F9 1068 aa29.86■■■□□ 2.37
RAB40C-201ENST00000248139 TNS2Q63HR2 1409 aa29.86■■■□□ 2.37
RAB40C-201ENST00000248139 TPM3P06753 285 aa29.86■■■□□ 2.37
RAB40C-201ENST00000248139 FAM160A1Q05DH4 1040 aa29.86■■■□□ 2.37
RAB40C-201ENST00000248139 RALYLQ86SE5 291 aaKnown RBP29.86■■■□□ 2.37
RAB40C-201ENST00000248139 NBPF3Q9H094 633 aa29.86■■■□□ 2.37
RAB40C-201ENST00000248139 SENP2Q9HC62 589 aa29.86■■■□□ 2.37
RAB40C-201ENST00000248139 KIF28PB7ZC32 967 aa29.85■■■□□ 2.37
RAB40C-201ENST00000248139 RIOK3O14730 519 aaKnown RBP29.85■■■□□ 2.37
RAB40C-201ENST00000248139 NDUFA8P51970 172 aa29.85■■■□□ 2.37
RAB40C-201ENST00000248139 SLC4A9Q96Q91 983 aa29.85■■■□□ 2.37
RAB40C-201ENST00000248139 CPLX1O14810 134 aa29.84■■■□□ 2.37
RAB40C-201ENST00000248139 NLRP10Q86W26 655 aa29.84■■■□□ 2.37
RAB40C-201ENST00000248139 PIH1D3Q9NQM4 214 aaKnown RBP29.84■■■□□ 2.37
RAB40C-201ENST00000248139 TBC1D2BQ9UPU7 963 aa29.84■■■□□ 2.37
RAB40C-201ENST00000248139 PLEKHG2Q9H7P9 1386 aa29.84■■■□□ 2.37
RAB40C-201ENST00000248139 SF3A1Q15459 793 aaKnown RBP29.84■■■□□ 2.37
RAB40C-201ENST00000248139 STX1AQ16623 288 aa29.84■■■□□ 2.37
RAB40C-201ENST00000248139 NCOA7Q8NI08 942 aa29.84■■■□□ 2.37
RAB40C-201ENST00000248139 SDF4Q9BRK5 362 aa29.84■■■□□ 2.37
RAB40C-201ENST00000248139 RIC1Q4ADV7 1423 aa29.84■■■□□ 2.37
RAB40C-201ENST00000248139 BECN2A8MW95 431 aa29.83■■■□□ 2.37
RAB40C-201ENST00000248139 ZFYP08048 801 aaPredicted RBP29.83■■■□□ 2.37
RAB40C-201ENST00000248139 STK38Q15208 465 aa29.83■■■□□ 2.37
RAB40C-201ENST00000248139 GIGYF2Q6Y7W6 1299 aaKnown RBP29.83■■■□□ 2.37
RAB40C-201ENST00000248139 SOS2Q07890 1332 aaPredicted RBP29.83■■■□□ 2.37
RAB40C-201ENST00000248139 TRIM28Q13263 835 aaKnown RBP29.82■■■□□ 2.36
RAB40C-201ENST00000248139 TBC1D10CQ8IV04 446 aa29.82■■■□□ 2.36
RAB40C-201ENST00000248139 DHX40Q8IX18 779 aaKnown RBP29.82■■■□□ 2.36
RAB40C-201ENST00000248139 MAP3K15Q6ZN16 1313 aa29.82■■■□□ 2.36
RAB40C-201ENST00000248139 MYH15Q9Y2K3 1946 aa29.82■■■□□ 2.36
RAB40C-201ENST00000248139 PHKA1P46020 1223 aa29.82■■■□□ 2.36
RAB40C-201ENST00000248139 ZBTB1Q9Y2K1 713 aa29.82■■■□□ 2.36
RAB40C-201ENST00000248139 BIN1O00499 593 aa29.81■■■□□ 2.36
RAB40C-201ENST00000248139 STARD3NLO95772 234 aa29.81■■■□□ 2.36
RAB40C-201ENST00000248139 EVCP57679 992 aa29.81■■■□□ 2.36
RAB40C-201ENST00000248139 CYB5R4Q7L1T6 521 aa29.81■■■□□ 2.36
RAB40C-201ENST00000248139 FILIP1Q7Z7B0 1213 aa29.81■■■□□ 2.36
RAB40C-201ENST00000248139 FMR1NBQ8N0W7 255 aaPredicted RBP29.81■■■□□ 2.36
RAB40C-201ENST00000248139 AOPEPQ8N6M6 819 aa29.81■■■□□ 2.36
RAB40C-201ENST00000248139 LINC00301Q8NCQ3 95 aa29.81■■■□□ 2.36
RAB40C-201ENST00000248139 TRMT112Q9UI30 125 aaKnown RBP29.81■■■□□ 2.36
RAB40C-201ENST00000248139 FBXO18Q8NFZ0 1043 aa29.81■■■□□ 2.36
RAB40C-201ENST00000248139 MRPS27Q92552 414 aaKnown RBP29.81■■■□□ 2.36
RAB40C-201ENST00000248139 IRS4O14654 1257 aaPredicted RBP29.8■■■□□ 2.36
RAB40C-201ENST00000248139 LRRFIP1Q32MZ4 808 aaKnown RBP29.8■■■□□ 2.36
RAB40C-201ENST00000248139 ISM2Q6H9L7 571 aa29.8■■■□□ 2.36
RAB40C-201ENST00000248139 SHANK3Q9BYB0 1731 aa29.8■■■□□ 2.36
RAB40C-201ENST00000248139 TOGARAM1Q9Y4F4 1720 aa29.8■■■□□ 2.36
RAB40C-201ENST00000248139 UBE2Q2LH0YL09 131 aa29.8■■■□□ 2.36
RAB40C-201ENST00000248139 RTEL1Q9NZ71 1219 aa29.8■■■□□ 2.36
RAB40C-201ENST00000248139 WWC3Q9ULE0 1092 aa29.8■■■□□ 2.36
RAB40C-201ENST00000248139 MYL10Q9BUA6 226 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms