RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 AOX1Q06278 1338 aa24.61■■□□□ 1.53
SNRPA-201ENST00000243563 ECE2O60344 883 aa24.61■■□□□ 1.53
SNRPA-201ENST00000243563 TTC22Q5TAA0 569 aa24.61■■□□□ 1.53
SNRPA-201ENST00000243563 LARGE2Q8N3Y3 721 aa24.61■■□□□ 1.53
SNRPA-201ENST00000243563 GPATCH3Q96I76 525 aa24.61■■□□□ 1.53
SNRPA-201ENST00000243563 COA1Q9GZY4 146 aa24.61■■□□□ 1.53
SNRPA-201ENST00000243563 ZAP70P43403 619 aa24.6■■□□□ 1.53
SNRPA-201ENST00000243563 ANTXR1Q9H6X2 564 aa24.6■■□□□ 1.53
SNRPA-201ENST00000243563 UQCRFS1P1P0C7P4 283 aa24.59■■□□□ 1.53
SNRPA-201ENST00000243563 DNAJC2Q99543 621 aaKnown RBP24.59■■□□□ 1.53
SNRPA-201ENST00000243563 MYH7P12883 1935 aa24.59■■□□□ 1.53
SNRPA-201ENST00000243563 GLRX3O76003 335 aaKnown RBP24.58■■□□□ 1.53
SNRPA-201ENST00000243563 SPATA5Q8NB90 893 aa24.58■■□□□ 1.53
SNRPA-201ENST00000243563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.58■■□□□ 1.53
SNRPA-201ENST00000243563 HAUS7Q99871 368 aa24.58■■□□□ 1.53
SNRPA-201ENST00000243563 CHAF1AQ13111 956 aaPredicted RBP24.57■■□□□ 1.52
SNRPA-201ENST00000243563 ERC2O15083 957 aa24.57■■□□□ 1.52
SNRPA-201ENST00000243563 CYP2E1P05181 493 aaPredicted RBP24.57■■□□□ 1.52
SNRPA-201ENST00000243563 TBC1D9Q6ZT07 1266 aa24.57■■□□□ 1.52
SNRPA-201ENST00000243563 MXD3Q9BW11 206 aa24.57■■□□□ 1.52
SNRPA-201ENST00000243563 GNL3LQ9NVN8 582 aaKnown RBP24.57■■□□□ 1.52
SNRPA-201ENST00000243563 VPS33BQ9H267 617 aa24.56■■□□□ 1.52
SNRPA-201ENST00000243563 PIH1D3Q9NQM4 214 aaKnown RBP24.56■■□□□ 1.52
SNRPA-201ENST00000243563 GOLIM4O00461 696 aa24.55■■□□□ 1.52
SNRPA-201ENST00000243563 GRIK5Q16478 980 aa24.55■■□□□ 1.52
SNRPA-201ENST00000243563 ADAMTSL1Q8N6G6 1762 aa24.55■■□□□ 1.52
SNRPA-201ENST00000243563 G3V3G9 751 aa24.54■■□□□ 1.52
SNRPA-201ENST00000243563 FRAT2O75474 233 aaPredicted RBP24.54■■□□□ 1.52
SNRPA-201ENST00000243563 GTF2IP78347 998 aa24.54■■□□□ 1.52
SNRPA-201ENST00000243563 DCAF8Q5TAQ9 597 aa24.54■■□□□ 1.52
SNRPA-201ENST00000243563 DENND2AQ9ULE3 1009 aa24.54■■□□□ 1.52
SNRPA-201ENST00000243563 SEMA3EO15041 775 aa24.53■■□□□ 1.52
SNRPA-201ENST00000243563 ZBTB22O15209 634 aa24.53■■□□□ 1.52
SNRPA-201ENST00000243563 CHGBP05060 677 aa24.53■■□□□ 1.52
SNRPA-201ENST00000243563 LMNB1P20700 586 aa24.53■■□□□ 1.52
SNRPA-201ENST00000243563 PODNQ7Z5L7 613 aa24.53■■□□□ 1.52
SNRPA-201ENST00000243563 NIM1KQ8IY84 436 aa24.53■■□□□ 1.52
SNRPA-201ENST00000243563 PAG1Q9NWQ8 432 aa24.53■■□□□ 1.52
SNRPA-201ENST00000243563 SDSP20132 328 aa24.53■■□□□ 1.52
SNRPA-201ENST00000243563 FAM205AQ6ZU69 1335 aa24.52■■□□□ 1.52
SNRPA-201ENST00000243563 MAST2Q6P0Q8 1798 aa24.52■■□□□ 1.52
SNRPA-201ENST00000243563 RAD17O75943 681 aa24.52■■□□□ 1.52
SNRPA-201ENST00000243563 CERS5Q8N5B7 392 aa24.52■■□□□ 1.52
SNRPA-201ENST00000243563 FBXW7Q969H0 707 aa24.52■■□□□ 1.52
SNRPA-201ENST00000243563 ZNRF3Q9ULT6 936 aa24.52■■□□□ 1.52
SNRPA-201ENST00000243563 PDS5AQ29RF7 1337 aaKnown RBP24.52■■□□□ 1.52
SNRPA-201ENST00000243563 RNF181Q9P0P0 153 aa24.51■■□□□ 1.51
SNRPA-201ENST00000243563 ZNF541Q9H0D2 1346 aa24.51■■□□□ 1.51
SNRPA-201ENST00000243563 GRIN3BO60391 1043 aa24.5■■□□□ 1.51
SNRPA-201ENST00000243563 SLFNL1Q499Z3 407 aa24.5■■□□□ 1.51
SNRPA-201ENST00000243563 C9orf131Q5VYM1 1079 aa24.5■■□□□ 1.51
SNRPA-201ENST00000243563 TRIM6-TRIM34B2RNG4 842 aa24.5■■□□□ 1.51
SNRPA-201ENST00000243563 BMP2KLQ5H9B9 411 aa24.5■■□□□ 1.51
SNRPA-201ENST00000243563 DACT2Q5SW24 774 aa24.5■■□□□ 1.51
SNRPA-201ENST00000243563 TTLL5Q6EMB2 1281 aa24.5■■□□□ 1.51
SNRPA-201ENST00000243563 JDP2Q8WYK2 163 aa24.5■■□□□ 1.51
SNRPA-201ENST00000243563 RILPL2Q969X0 211 aa24.5■■□□□ 1.51
SNRPA-201ENST00000243563 FZD9O00144 591 aa24.49■■□□□ 1.51
SNRPA-201ENST00000243563 CXCL9Q07325 125 aa24.49■■□□□ 1.51
SNRPA-201ENST00000243563 USP17L3A6NCW0 530 aa24.48■■□□□ 1.51
SNRPA-201ENST00000243563 USP17L4A6NCW7 530 aa24.48■■□□□ 1.51
SNRPA-201ENST00000243563 PSMD14O00487 310 aa24.48■■□□□ 1.51
SNRPA-201ENST00000243563 PRDX5P30044 214 aa24.48■■□□□ 1.51
SNRPA-201ENST00000243563 USP17L1Q7RTZ2 530 aa24.48■■□□□ 1.51
SNRPA-201ENST00000243563 ZNF384Q8TF68 577 aa24.48■■□□□ 1.51
SNRPA-201ENST00000243563 MFSD14BQ5SR56 506 aa24.47■■□□□ 1.51
SNRPA-201ENST00000243563 ABCF2Q9UG63 623 aa24.47■■□□□ 1.51
SNRPA-201ENST00000243563 SALL1Q9NSC2 1324 aa24.47■■□□□ 1.51
SNRPA-201ENST00000243563 MYH2Q9UKX2 1941 aa24.47■■□□□ 1.51
SNRPA-201ENST00000243563 STRIP1Q5VSL9 837 aa24.46■■□□□ 1.51
SNRPA-201ENST00000243563 KBTBD3Q8NAB2 608 aa24.46■■□□□ 1.51
SNRPA-201ENST00000243563 WDR66Q8TBY9 1149 aa24.46■■□□□ 1.51
SNRPA-201ENST00000243563 EVI5LQ96CN4 794 aa24.46■■□□□ 1.51
SNRPA-201ENST00000243563 CNTROBQ8N137 903 aa24.45■■□□□ 1.5
SNRPA-201ENST00000243563 ZBTB12Q9Y330 459 aaPredicted RBP24.45■■□□□ 1.5
SNRPA-201ENST00000243563 IDH1O75874 414 aaKnown RBP24.44■■□□□ 1.5
SNRPA-201ENST00000243563 FSD1Q9BTV5 496 aa24.44■■□□□ 1.5
SNRPA-201ENST00000243563 VIL1P09327 827 aaKnown RBP24.43■■□□□ 1.5
SNRPA-201ENST00000243563 CIAPIN1Q6FI81 312 aa24.43■■□□□ 1.5
SNRPA-201ENST00000243563 F8W031 263 aaPredicted RBP24.43■■□□□ 1.5
SNRPA-201ENST00000243563 LRP2BPQ9P2M1 347 aa24.43■■□□□ 1.5
SNRPA-201ENST00000243563 MECOMQ03112 1051 aa24.42■■□□□ 1.5
SNRPA-201ENST00000243563 TTF1Q15361 905 aaPredicted RBP24.42■■□□□ 1.5
SNRPA-201ENST00000243563 RSBN1LQ6PCB5 846 aaPredicted RBP24.42■■□□□ 1.5
SNRPA-201ENST00000243563 GMLQ99445 158 aa24.42■■□□□ 1.5
SNRPA-201ENST00000243563 SHTN1A0MZ66 631 aa24.41■■□□□ 1.5
SNRPA-201ENST00000243563 ADGRA1Q86SQ6 560 aa24.41■■□□□ 1.5
SNRPA-201ENST00000243563 TBC1D22AQ8WUA7 517 aa24.41■■□□□ 1.5
SNRPA-201ENST00000243563 RAI14Q9P0K7 980 aa24.41■■□□□ 1.5
SNRPA-201ENST00000243563 TCRBV5S4A2TA0A5A2 114 aa24.4■■□□□ 1.5
SNRPA-201ENST00000243563 PDE6AP16499 860 aa24.4■■□□□ 1.5
SNRPA-201ENST00000243563 EIF6P56537 245 aaKnown RBP24.4■■□□□ 1.5
SNRPA-201ENST00000243563 DIXDC1Q155Q3 683 aa24.4■■□□□ 1.5
SNRPA-201ENST00000243563 ERICH6Q7L0X2 663 aa24.4■■□□□ 1.5
SNRPA-201ENST00000243563 KIAA0825Q8IV33 1275 aa24.4■■□□□ 1.5
SNRPA-201ENST00000243563 NSUN4Q96CB9 384 aaKnown RBP24.4■■□□□ 1.5
SNRPA-201ENST00000243563 IL25Q9H293 177 aa24.4■■□□□ 1.5
SNRPA-201ENST00000243563 GJA3Q9Y6H8 435 aa24.4■■□□□ 1.5
SNRPA-201ENST00000243563 LDHBP07195 334 aaKnown RBP24.39■■□□□ 1.5
SNRPA-201ENST00000243563 FKBP1AP62942 108 aaKnown RBP24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms