RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 LMNTD2Q8IXW0 634 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 LRRC2Q9BYS8 371 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 VCXQ9H320 206 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 STX8Q9UNK0 236 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 B4DLN1 442 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 MRPL12P52815 198 aaKnown RBP7.61□□□□□ -1.19
CSMD2-201ENST00000241312 TTLL12Q14166 644 aaPredicted RBP7.61□□□□□ -1.19
CSMD2-201ENST00000241312 CCDC62Q6P9F0 684 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 ADGRL1O94910 1474 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 ARID4AP29374 1257 aaPredicted RBP7.6□□□□□ -1.19
CSMD2-201ENST00000241312 FAM160A1Q05DH4 1040 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 ERCC6LQ2NKX8 1250 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 NECAB1Q8N987 351 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 ELP1O95163 1332 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 UQCRFS1P1P0C7P4 283 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 INTS4Q96HW7 963 aaKnown RBP7.6□□□□□ -1.19
CSMD2-201ENST00000241312 MTUS1Q9ULD2 1270 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 GIGYF1O75420 1035 aaPredicted RBP7.6□□□□□ -1.19
CSMD2-201ENST00000241312 MARCKSP29966 332 aaPredicted RBP7.6□□□□□ -1.19
CSMD2-201ENST00000241312 RAB3GAP1Q15042 981 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 HEATR3Q7Z4Q2 680 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 GNAT2P19087 354 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 PLCB3Q01970 1234 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 CLUL1Q15846 466 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 HS2ST1Q7LGA3 356 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 ARHGAP25P42331 645 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 NAPAP54920 295 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 DACT1Q9NYF0 836 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 ARID5AQ03989 594 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 CALM1P0DP23 149 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 CALM2P0DP24 149 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 CALM3P0DP25 149 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 RHOXF2BP0C7M4 288 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 RHOXF2Q9BQY4 288 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 PLCG2P16885 1265 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.6□□□□□ -1.19
CSMD2-201ENST00000241312 DNM1Q05193 864 aaKnown RBP7.6□□□□□ -1.19
CSMD2-201ENST00000241312 CCDC122Q5T0U0 273 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 SMC5Q8IY18 1101 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 UBL4BQ8N7F7 174 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 CCDC26Q8TAB7 109 aa7.6□□□□□ -1.19
CSMD2-201ENST00000241312 JARID2Q92833 1246 aaPredicted RBP7.6□□□□□ -1.19
CSMD2-201ENST00000241312 SEC62Q99442 399 aaKnown RBP7.6□□□□□ -1.19
CSMD2-201ENST00000241312 TTC16Q8NEE8 873 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 ACTN4O43707 911 aaKnown RBP7.59□□□□□ -1.19
CSMD2-201ENST00000241312 RPL13P26373 211 aaKnown RBP7.59□□□□□ -1.19
CSMD2-201ENST00000241312 GJC1P36383 396 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 CCDC152Q4G0S7 254 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 MPRIPQ6WCQ1 1025 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.59□□□□□ -1.19
CSMD2-201ENST00000241312 ESYT1Q9BSJ8 1104 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 USH1CQ9Y6N9 552 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 CASQ2O14958 399 aaPredicted RBP7.59□□□□□ -1.19
CSMD2-201ENST00000241312 TERF1P54274 439 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 SMAP1Q8IYB5 467 aaPredicted RBP7.59□□□□□ -1.19
CSMD2-201ENST00000241312 IQUBQ8NA54 791 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 IFT81Q8WYA0 676 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 MCUR1Q96AQ8 359 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 HMGB1P1B2RPK0 211 aaPredicted RBP7.59□□□□□ -1.19
CSMD2-201ENST00000241312 FAM13AO94988 1023 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 GNA11P29992 359 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 VWA3BQ502W6 1294 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 RILPL1Q5EBL4 403 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 Q6ZUG5 572 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 CROCCP2Q86T23 111 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 CCDC25Q86WR0 208 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 RGS22Q8NE09 1264 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 ERO1AQ96HE7 468 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 TCEANC2Q96MN5 208 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 BUB1BO60566 1050 aaPredicted RBP7.59□□□□□ -1.19
CSMD2-201ENST00000241312 GAS8O95995 478 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 TBC1D31Q96DN5 1066 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 LZTFL1Q9NQ48 299 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 RAD50Q92878 1312 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 SMIM23A6NLE4 172 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 KRT2P35908 639 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 PDE1AP54750 535 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 ARHGAP24Q8N264 748 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 GTF3C6Q969F1 213 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 MMRN2Q9H8L6 949 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 SOS1Q07889 1333 aaPredicted RBP7.59□□□□□ -1.19
CSMD2-201ENST00000241312 KIAA0586Q9BVV6 1533 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 I3L4J1 428 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 SH3BGRP55822 239 aaPredicted RBP7.59□□□□□ -1.19
CSMD2-201ENST00000241312 ZNF569Q5MCW4 686 aa7.59□□□□□ -1.19
CSMD2-201ENST00000241312 MCMDC2Q4G0Z9 681 aa7.59□□□□□ -1.2
CSMD2-201ENST00000241312 TAOK1Q7L7X3 1001 aa7.59□□□□□ -1.2
CSMD2-201ENST00000241312 NME9Q86XW9 330 aa7.59□□□□□ -1.2
CSMD2-201ENST00000241312 UBLCP1Q8WVY7 318 aaPredicted RBP7.59□□□□□ -1.2
CSMD2-201ENST00000241312 EMILIN1Q9Y6C2 1016 aa7.59□□□□□ -1.2
CSMD2-201ENST00000241312 NBPF6Q5VWK0 638 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 NBPF5PQ86XG9 351 aaPredicted RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 NBPF4Q96M43 638 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 SYNRGQ9UMZ2 1314 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 AKR1B15C9JRZ8 316 aaPredicted RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 ALDH1L1O75891 902 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 HPDP32754 393 aaPredicted RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 PLCD3Q8N3E9 789 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 AFAP1L2Q8N4X5 818 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 NUF2Q9BZD4 464 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms