RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 GPR108Q9NPR9 543 aa18.23■□□□□ 0.51
CTSD-201ENST00000236671 ASAP1Q9ULH1 1129 aa18.23■□□□□ 0.51
CTSD-201ENST00000236671 SALL1Q9NSC2 1324 aa18.23■□□□□ 0.51
CTSD-201ENST00000236671 ZSCAN25Q6NSZ9 544 aa18.23■□□□□ 0.51
CTSD-201ENST00000236671 DEFB132Q7Z7B7 95 aa18.23■□□□□ 0.51
CTSD-201ENST00000236671 TICAM2Q86XR7 235 aa18.23■□□□□ 0.51
CTSD-201ENST00000236671 DRC7Q8IY82 874 aa18.23■□□□□ 0.51
CTSD-201ENST00000236671 FTOQ9C0B1 505 aaKnown RBP eCLIP18.23■□□□□ 0.51
CTSD-201ENST00000236671 A0A0G2JLW4 131 aa18.22■□□□□ 0.51
CTSD-201ENST00000236671 NBPF26B4DH59 902 aa18.22■□□□□ 0.51
CTSD-201ENST00000236671 CDC25BP30305 580 aa18.22■□□□□ 0.51
CTSD-201ENST00000236671 CABP4P57796 275 aa18.22■□□□□ 0.51
CTSD-201ENST00000236671 IQCB1Q15051 598 aa18.22■□□□□ 0.51
CTSD-201ENST00000236671 NBPF14Q5TI25 921 aa18.22■□□□□ 0.51
CTSD-201ENST00000236671 NBPF10Q6P3W6 841 aaKnown RBP18.22■□□□□ 0.51
CTSD-201ENST00000236671 NBPF15Q8N660 670 aa18.22■□□□□ 0.51
CTSD-201ENST00000236671 GOLPH3LQ9H4A5 285 aa18.22■□□□□ 0.51
CTSD-201ENST00000236671 NUP188Q5SRE5 1749 aa18.22■□□□□ 0.51
CTSD-201ENST00000236671 NEUROD6Q96NK8 337 aa18.22■□□□□ 0.51
CTSD-201ENST00000236671 E7EWF7 191 aa18.21■□□□□ 0.51
CTSD-201ENST00000236671 FOSBP53539 338 aa18.21■□□□□ 0.51
CTSD-201ENST00000236671 C11orf57Q6ZUT1 292 aaPredicted RBP18.21■□□□□ 0.51
CTSD-201ENST00000236671 CCAR1Q8IX12 1150 aaKnown RBP18.21■□□□□ 0.51
CTSD-201ENST00000236671 USP28Q96RU2 1077 aa18.21■□□□□ 0.51
CTSD-201ENST00000236671 TMOD3Q9NYL9 352 aa18.21■□□□□ 0.51
CTSD-201ENST00000236671 MAST3O60307 1309 aa18.21■□□□□ 0.51
CTSD-201ENST00000236671 BCL9O00512 1426 aa18.21■□□□□ 0.51
CTSD-201ENST00000236671 CTAGE5O15320 804 aa18.2■□□□□ 0.5
CTSD-201ENST00000236671 CTIFO43310 598 aaKnown RBP18.2■□□□□ 0.5
CTSD-201ENST00000236671 HSPD1P10809 573 aaKnown RBP18.2■□□□□ 0.5
CTSD-201ENST00000236671 TIMM10P62072 90 aa18.2■□□□□ 0.5
CTSD-201ENST00000236671 SNW1Q13573 536 aaKnown RBP18.2■□□□□ 0.5
CTSD-201ENST00000236671 SARM1Q6SZW1 724 aa18.2■□□□□ 0.5
CTSD-201ENST00000236671 CLIP2Q9UDT6 1046 aa18.2■□□□□ 0.5
CTSD-201ENST00000236671 IL15P40933 162 aaPredicted RBP18.2■□□□□ 0.5
CTSD-201ENST00000236671 CCT2P78371 535 aaKnown RBP18.2■□□□□ 0.5
CTSD-201ENST00000236671 STX1AQ16623 288 aa18.2■□□□□ 0.5
CTSD-201ENST00000236671 CCDC144BQ3MJ40 725 aa18.2■□□□□ 0.5
CTSD-201ENST00000236671 CCDC144CPQ8IYA2 1237 aa18.2■□□□□ 0.5
CTSD-201ENST00000236671 NCOA5Q9HCD5 579 aaKnown RBP18.2■□□□□ 0.5
CTSD-201ENST00000236671 SPEF2Q9C093 1822 aa18.19■□□□□ 0.5
CTSD-201ENST00000236671 ATL3Q6DD88 541 aa18.19■□□□□ 0.5
CTSD-201ENST00000236671 CACTINQ8WUQ7 758 aaKnown RBP18.19■□□□□ 0.5
CTSD-201ENST00000236671 PKNOX2Q96KN3 472 aa18.19■□□□□ 0.5
CTSD-201ENST00000236671 CWC25Q9NXE8 425 aaPredicted RBP18.19■□□□□ 0.5
CTSD-201ENST00000236671 APBA3O96018 575 aa18.19■□□□□ 0.5
CTSD-201ENST00000236671 PDIA3P30101 505 aaKnown RBP18.19■□□□□ 0.5
CTSD-201ENST00000236671 TTLL7Q6ZT98 887 aa18.19■□□□□ 0.5
CTSD-201ENST00000236671 ENGASEQ8NFI3 743 aa18.19■□□□□ 0.5
CTSD-201ENST00000236671 UPF1Q92900 1129 aaKnown RBP eCLIP18.19■□□□□ 0.51e-13■■■■■ 70.3
CTSD-201ENST00000236671 RNF113AO15541 343 aaKnown RBP18.18■□□□□ 0.5
CTSD-201ENST00000236671 EN1Q05925 392 aaPredicted RBP18.18■□□□□ 0.5
CTSD-201ENST00000236671 LRRC24Q50LG9 513 aa18.18■□□□□ 0.5
CTSD-201ENST00000236671 ANKRD7Q92527 254 aa18.18■□□□□ 0.5
CTSD-201ENST00000236671 ZNF274Q96GC6 653 aaPredicted RBP18.18■□□□□ 0.5
CTSD-201ENST00000236671 ZNF396Q96N95 335 aaPredicted RBP18.18■□□□□ 0.5
CTSD-201ENST00000236671 CARMIL3Q8ND23 1372 aa18.18■□□□□ 0.5
CTSD-201ENST00000236671 ERVV-2B6SEH9 535 aa18.17■□□□□ 0.5
CTSD-201ENST00000236671 GOLGA6L19H0YKK7 550 aa18.17■□□□□ 0.5
CTSD-201ENST00000236671 M0R2C6 588 aa18.17■□□□□ 0.5
CTSD-201ENST00000236671 EYA2O00167 538 aa18.17■□□□□ 0.5
CTSD-201ENST00000236671 CCDC73Q6ZRK6 1079 aa18.17■□□□□ 0.5
CTSD-201ENST00000236671 SMAP1Q8IYB5 467 aaPredicted RBP18.17■□□□□ 0.5
CTSD-201ENST00000236671 BCL11BQ9C0K0 894 aaPredicted RBP18.17■□□□□ 0.5
CTSD-201ENST00000236671 ATG3Q9NT62 314 aa18.17■□□□□ 0.5
CTSD-201ENST00000236671 IFIT1P09914 478 aaKnown RBP18.17■□□□□ 0.5
CTSD-201ENST00000236671 FAM160A1Q05DH4 1040 aa18.17■□□□□ 0.5
CTSD-201ENST00000236671 MRFAP1L1Q96HT8 127 aa18.17■□□□□ 0.5
CTSD-201ENST00000236671 ZNF594Q96JF6 807 aaPredicted RBP18.17■□□□□ 0.5
CTSD-201ENST00000236671 C16orf45Q96MC5 204 aaPredicted RBP18.17■□□□□ 0.5
CTSD-201ENST00000236671 UBR2Q8IWV8 1755 aa18.17■□□□□ 0.5
CTSD-201ENST00000236671 A0A1B0GUL7 405 aa18.16■□□□□ 0.5
CTSD-201ENST00000236671 CHST3Q7LGC8 479 aa18.16■□□□□ 0.5
CTSD-201ENST00000236671 FBXL16Q8N461 479 aa18.16■□□□□ 0.5
CTSD-201ENST00000236671 KINO60870 393 aaKnown RBP18.16■□□□□ 0.5
CTSD-201ENST00000236671 PPFIA3O75145 1194 aa18.16■□□□□ 0.5
CTSD-201ENST00000236671 GUCY1B3Q02153 619 aa18.16■□□□□ 0.5
CTSD-201ENST00000236671 TTLL5Q6EMB2 1281 aa18.16■□□□□ 0.5
CTSD-201ENST00000236671 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.16■□□□□ 0.5
CTSD-201ENST00000236671 SLC4A9Q96Q91 983 aa18.16■□□□□ 0.5
CTSD-201ENST00000236671 CIAO1O76071 339 aa18.15■□□□□ 0.5
CTSD-201ENST00000236671 FDPSP14324 419 aaKnown RBP18.15■□□□□ 0.5
CTSD-201ENST00000236671 EVCP57679 992 aa18.15■□□□□ 0.5
CTSD-201ENST00000236671 DHX40Q8IX18 779 aaKnown RBP18.15■□□□□ 0.5
CTSD-201ENST00000236671 FSIP1Q8NA03 581 aa18.15■□□□□ 0.5
CTSD-201ENST00000236671 NAP1L2Q9ULW6 460 aaPredicted RBP18.15■□□□□ 0.5
CTSD-201ENST00000236671 PAPPAQ13219 1627 aa18.15■□□□□ 0.5
CTSD-201ENST00000236671 KCPQ6ZWJ8 1503 aa18.14■□□□□ 0.5
CTSD-201ENST00000236671 ME1P48163 572 aa18.14■□□□□ 0.5
CTSD-201ENST00000236671 EZH2Q15910 746 aaKnown RBP18.14■□□□□ 0.5
CTSD-201ENST00000236671 LRRC8AQ8IWT6 810 aa18.14■□□□□ 0.5
CTSD-201ENST00000236671 PROM2Q8N271 834 aa18.14■□□□□ 0.5
CTSD-201ENST00000236671 A0A087WWV3 80 aa18.14■□□□□ 0.49
CTSD-201ENST00000236671 SMTNL1A8MU46 457 aa18.14■□□□□ 0.49
CTSD-201ENST00000236671 FOXP2O15409 715 aa18.14■□□□□ 0.49
CTSD-201ENST00000236671 PPP4R3BQ5MIZ7 849 aa18.14■□□□□ 0.49
CTSD-201ENST00000236671 PDCL2Q8N4E4 241 aa18.14■□□□□ 0.49
CTSD-201ENST00000236671 CCDC191Q8NCU4 936 aa18.14■□□□□ 0.49
CTSD-201ENST00000236671 OSBP2Q969R2 916 aa18.14■□□□□ 0.49
CTSD-201ENST00000236671 PUS3Q9BZE2 481 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms